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The map label for this gene is yfiH [C]

Identifier: 158425608

GI number: 158425608

Start: 4550652

End: 4551419

Strand: Direct

Name: yfiH [C]

Synonym: AZC_3984

Alternate gene names: 158425608

Gene position: 4550652-4551419 (Clockwise)

Preceding gene: 158425607

Following gene: 158425609

Centisome position: 84.75

GC content: 70.18

Gene sequence:

>768_bases
ATGATGGTGGAAGCCCCCCTGCTGAAGGCCCTGCCCGGCATCCGGCACGCCTTCTTCACCCGGCAGGGCGGCGTCTCGAC
GGGCCCCTACACCAGCCTCAACGGCGGCCTCGGCTCGAATGACGCGGAGGCGAACGTGATGGAGAACCGCAGTCGCATGG
CGGGGGCCCTGGGCGTCGAGCCCGCGCATCTCGTCATGTGCTGGCAGGTCCATTCCGCCATATGCGTGCCCATGACGGCG
CCCTGGACGCGTCCCGAGGCGCCCCAGGCGGATGCCATCGCCACCAATGTCCCCGGCCTTGCCGCCACCGTCACCATCGC
CGACTGCGGCCCGGTACTGTTCGCCGATCCCGTCGCGCGGGTGGTGGCGGCCGCCCATTCCGGCTGGAAAGGCGCCTTCG
GCGGCGTCATCGAGGCGACGGTTGCCCGCATGGAGACGTTCGGCGCCCGGCGCGGCGACATCCGCGCGGTCATCGGCCCG
CTCATCCGCCAGCCGAGCTATGAGGTGGGCGAGGACTTCATCGCCCGCTTCCTCGATGCGGACCGCACCTTCGCCCGCTT
CTTCGCGCCGGCCGACCGGCCGCACCACTCCTTGTTCGACCTGCCCGGCTTCATCGCCCATCGCCTGAGGGAAGCCCGCA
TCGACCACGTGGAGGATCTGGGCCTCGACACCTACACGGACCCCGAGCGCTTCTTCAGCTACCGGCGCATGACCCACCGC
AAGGAACCGGACTACGGCCGCCTCGTGGCGGCGATCGTCCTCGAATAG

Upstream 100 bases:

>100_bases
CGGGAACGGGCGAGATGGGCACGCTGTTCAAGGTTCTGGCGCTGGCGGCGCCCACGTTCGGCCCGCCGCCGGCCTTCGCC
CCGGAAGAGGAGTTCGCGAC

Downstream 100 bases:

>100_bases
CCGCCGCTCCAGACACGCCGTAAGCCCAGTTCCGCCATCATTCTGCTCGACTGCCGGATATGTTGAGCAAAATCTTAAGC
TGCGCGTTCGGGGGACCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MMVEAPLLKALPGIRHAFFTRQGGVSTGPYTSLNGGLGSNDAEANVMENRSRMAGALGVEPAHLVMCWQVHSAICVPMTA
PWTRPEAPQADAIATNVPGLAATVTIADCGPVLFADPVARVVAAAHSGWKGAFGGVIEATVARMETFGARRGDIRAVIGP
LIRQPSYEVGEDFIARFLDADRTFARFFAPADRPHHSLFDLPGFIAHRLREARIDHVEDLGLDTYTDPERFFSYRRMTHR
KEPDYGRLVAAIVLE

Sequences:

>Translated_255_residues
MMVEAPLLKALPGIRHAFFTRQGGVSTGPYTSLNGGLGSNDAEANVMENRSRMAGALGVEPAHLVMCWQVHSAICVPMTA
PWTRPEAPQADAIATNVPGLAATVTIADCGPVLFADPVARVVAAAHSGWKGAFGGVIEATVARMETFGARRGDIRAVIGP
LIRQPSYEVGEDFIARFLDADRTFARFFAPADRPHHSLFDLPGFIAHRLREARIDHVEDLGLDTYTDPERFFSYRRMTHR
KEPDYGRLVAAIVLE
>Mature_255_residues
MMVEAPLLKALPGIRHAFFTRQGGVSTGPYTSLNGGLGSNDAEANVMENRSRMAGALGVEPAHLVMCWQVHSAICVPMTA
PWTRPEAPQADAIATNVPGLAATVTIADCGPVLFADPVARVVAAAHSGWKGAFGGVIEATVARMETFGARRGDIRAVIGP
LIRQPSYEVGEDFIARFLDADRTFARFFAPADRPHHSLFDLPGFIAHRLREARIDHVEDLGLDTYTDPERFFSYRRMTHR
KEPDYGRLVAAIVLE

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=233, Percent_Identity=29.6137339055794, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI190194372, Length=233, Percent_Identity=29.6137339055794, Blast_Score=83, Evalue=3e-16,
Organism=Escherichia coli, GI1788945, Length=244, Percent_Identity=36.0655737704918, Blast_Score=111, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 27779; Mature: 27779

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVEAPLLKALPGIRHAFFTRQGGVSTGPYTSLNGGLGSNDAEANVMENRSRMAGALGVE
CCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PAHLVMCWQVHSAICVPMTAPWTRPEAPQADAIATNVPGLAATVTIADCGPVLFADPVAR
HHHHHHHHHHHCEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHH
VVAAAHSGWKGAFGGVIEATVARMETFGARRGDIRAVIGPLIRQPSYEVGEDFIARFLDA
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCC
DRTFARFFAPADRPHHSLFDLPGFIAHRLREARIDHVEDLGLDTYTDPERFFSYRRMTHR
CHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
KEPDYGRLVAAIVLE
CCCCHHHHHHHHCCC
>Mature Secondary Structure
MMVEAPLLKALPGIRHAFFTRQGGVSTGPYTSLNGGLGSNDAEANVMENRSRMAGALGVE
CCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PAHLVMCWQVHSAICVPMTAPWTRPEAPQADAIATNVPGLAATVTIADCGPVLFADPVAR
HHHHHHHHHHHCEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHH
VVAAAHSGWKGAFGGVIEATVARMETFGARRGDIRAVIGPLIRQPSYEVGEDFIARFLDA
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCC
DRTFARFFAPADRPHHSLFDLPGFIAHRLREARIDHVEDLGLDTYTDPERFFSYRRMTHR
CHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
KEPDYGRLVAAIVLE
CCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]