| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425574
Identifier: 158425574
GI number: 158425574
Start: 4515540
End: 4516748
Strand: Reverse
Name: 158425574
Synonym: AZC_3950
Alternate gene names: NA
Gene position: 4516748-4515540 (Counterclockwise)
Preceding gene: 158425580
Following gene: 158425573
Centisome position: 84.11
GC content: 68.16
Gene sequence:
>1209_bases ATGGGGTATGATCCCAACGGCGCAACGAGAAACGCGCCCGAGGGCGCAACGCGCTGTCGGGCGGTGACCTCCGGACCCTC GGTCCGGTCGGCGGATCGGCGATGCCGTCCTCTTGAAGCGCGAGCCCTTAGCACTGAAAATGTGCCGAGGCAATTTAAAC GTGCCGTCCGGCCACGCCGAGGGCAGCGATGCTGGCGCAAGCCTAGGGCTCTAGAACCGGCATGGAATATGCGGGCCGTG CCGTCCCGCGTGCCCGCCTTCGCCATCGTGAGAGGCCCGATGACGTCCGCCACAGGTTTGCTGTCCCGCCGCGATTTCCT GGCCGGTGCCGCCGCGCTCCCGCTTGCTGCGGGCGGGCTCGGCCGGGCGATGGCGACGCCCCTCAATGCGCCCTTCAGCG TTGGCGCCTTCCGGATCATGCCCATTCTCGACGGCCCCTTCGGTCTCACACCGGCCCTGATTCCCGATGCCGATTCCGTG GAGGGCGAGAAGCTGGTGGAGCGGGCGGGCCTGCCCAAGCTCGGCCCCTGGCCGCAGCCGGTGAACGTCTTCGCCATCAA TCGCGGCGACCGATTCTATGTGGTGGACGCGGGTGCCGGGGCGACGCTGGGGCCTGATCTCGGCAAGGCCGCAGAGCGCC TTGCCGCTGTCGGCGTGCCGCCCGAGCGGGTCAACGCGCTGCTCATGACCCATCTCCATGCCGACCATGCGGGCGGCCTG ATGAAGGCGGACGGCACGGCCCTGTTCCCCAATGCGGAACTGGTGGTGCAGCAGATGGAGGTGGCTTTCTGGAGCGACGA CGGCGCCATGTCGCGCATGCCGACCTCCATGGAGCCCATGTTCATGATCGCCCGCAAGGCGCTGGAGGCCTACAAGGGCC GCGTGCGCACGGTGAACGGCAGCGGTGAGGCGGTGCCGGGCATCACCTTCGTGCCGCTGCCCGGGCACACGCCGGGCCAT GCGGGCTTCCTGCTGGCGGATGGCAAGGAGCAGTTCCTCATCTTTGCCGACACCATCCATTCCGCTTTGCTGCAATTCCC CCATCCCGCCTGGACGGTGGTGTTCGACGTGGACGCCTCGCTTGCCGCCGCCACCCGCCGGGGGATTCTCGACCGGCTGG TGATCGACAAGATCGGCGTCACCGGCTCTCATATTCCCGACCGGGGCCGGATCATCGCCCGGCAGGCGGGTTACGTACTG GTGGATTGA
Upstream 100 bases:
>100_bases CGAACATGGGTCCGTCCTGATCACTCCGGCCGGGACCGGAGTTGGGGTTCGCAAGGTCGGCGGCTGGCCCGCCGGGTCTT GTCTCTCTGCTGCGCCACAG
Downstream 100 bases:
>100_bases GGGGCCGCGGCGGCCCCCTACGCGGGGCACGCATGGCATCACGTTTCTTCCTGACGGCTCTCCTTGGCCTTCTCGCCTTC GCGTCCGCTTCCGCACAGGA
Product: Zn-dependent hydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Twin-Arginine Translocation Pathway Signal; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase; Metal Dependent Hydrolase; Beta-Lactamase; Methyl Parathion Hydrolase; Metallo-Beta-Lactamase Superfamily; Beta-Lactamase Family Protein; Hydrolase; Beta-Lactamase Superfamily Hydrolase; Metallo-Hydrolase Protein; Zn-Dependent Beta-Lactamase Domain Hydrolase; Beta-Lactamase/Hydrolase; Metal-Dependent Hydrolase; Metallo-Beta-Lactamase Protein; Organophosphate Pesticide Hydrolase; Signal Peptide; Beta-Lactamase-Like Zn-Dependent Hydrolase Protein; Metallo-Beta-Lactamase Domain-Containing Protein; GloB Protein; Aldehyde Dehydrogenase; Metallo-Beta-Lactamase Family Methyl Parathion Hydrolase; Signal Peptide Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein; Metall Dependent Hydrolase; Zn-Dependent Hydrolase Including Glyoxylase
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MGYDPNGATRNAPEGATRCRAVTSGPSVRSADRRCRPLEARALSTENVPRQFKRAVRPRRGQRCWRKPRALEPAWNMRAV PSRVPAFAIVRGPMTSATGLLSRRDFLAGAAALPLAAGGLGRAMATPLNAPFSVGAFRIMPILDGPFGLTPALIPDADSV EGEKLVERAGLPKLGPWPQPVNVFAINRGDRFYVVDAGAGATLGPDLGKAAERLAAVGVPPERVNALLMTHLHADHAGGL MKADGTALFPNAELVVQQMEVAFWSDDGAMSRMPTSMEPMFMIARKALEAYKGRVRTVNGSGEAVPGITFVPLPGHTPGH AGFLLADGKEQFLIFADTIHSALLQFPHPAWTVVFDVDASLAAATRRGILDRLVIDKIGVTGSHIPDRGRIIARQAGYVL VD
Sequences:
>Translated_402_residues MGYDPNGATRNAPEGATRCRAVTSGPSVRSADRRCRPLEARALSTENVPRQFKRAVRPRRGQRCWRKPRALEPAWNMRAV PSRVPAFAIVRGPMTSATGLLSRRDFLAGAAALPLAAGGLGRAMATPLNAPFSVGAFRIMPILDGPFGLTPALIPDADSV EGEKLVERAGLPKLGPWPQPVNVFAINRGDRFYVVDAGAGATLGPDLGKAAERLAAVGVPPERVNALLMTHLHADHAGGL MKADGTALFPNAELVVQQMEVAFWSDDGAMSRMPTSMEPMFMIARKALEAYKGRVRTVNGSGEAVPGITFVPLPGHTPGH AGFLLADGKEQFLIFADTIHSALLQFPHPAWTVVFDVDASLAAATRRGILDRLVIDKIGVTGSHIPDRGRIIARQAGYVL VD >Mature_401_residues GYDPNGATRNAPEGATRCRAVTSGPSVRSADRRCRPLEARALSTENVPRQFKRAVRPRRGQRCWRKPRALEPAWNMRAVP SRVPAFAIVRGPMTSATGLLSRRDFLAGAAALPLAAGGLGRAMATPLNAPFSVGAFRIMPILDGPFGLTPALIPDADSVE GEKLVERAGLPKLGPWPQPVNVFAINRGDRFYVVDAGAGATLGPDLGKAAERLAAVGVPPERVNALLMTHLHADHAGGLM KADGTALFPNAELVVQQMEVAFWSDDGAMSRMPTSMEPMFMIARKALEAYKGRVRTVNGSGEAVPGITFVPLPGHTPGHA GFLLADGKEQFLIFADTIHSALLQFPHPAWTVVFDVDASLAAATRRGILDRLVIDKIGVTGSHIPDRGRIIARQAGYVLV D
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42915; Mature: 42784
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYDPNGATRNAPEGATRCRAVTSGPSVRSADRRCRPLEARALSTENVPRQFKRAVRPRR CCCCCCCCCCCCCCCHHHHEEECCCCCCCCHHHCCCCCHHHHCCCCCHHHHHHHHHCCCC GQRCWRKPRALEPAWNMRAVPSRVPAFAIVRGPMTSATGLLSRRDFLAGAAALPLAAGGL HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC GRAMATPLNAPFSVGAFRIMPILDGPFGLTPALIPDADSVEGEKLVERAGLPKLGPWPQP CHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC VNVFAINRGDRFYVVDAGAGATLGPDLGKAAERLAAVGVPPERVNALLMTHLHADHAGGL CEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCE MKADGTALFPNAELVVQQMEVAFWSDDGAMSRMPTSMEPMFMIARKALEAYKGRVRTVNG EECCCCEECCCHHHHHHHHHHEEECCCCCHHCCCCCCCHHHHHHHHHHHHHCCEEEEECC SGEAVPGITFVPLPGHTPGHAGFLLADGKEQFLIFADTIHSALLQFPHPAWTVVFDVDAS CCCCCCCEEEEECCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHCCCCCEEEEEECCCH LAAATRRGILDRLVIDKIGVTGSHIPDRGRIIARQAGYVLVD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEEC >Mature Secondary Structure GYDPNGATRNAPEGATRCRAVTSGPSVRSADRRCRPLEARALSTENVPRQFKRAVRPRR CCCCCCCCCCCCCCHHHHEEECCCCCCCCHHHCCCCCHHHHCCCCCHHHHHHHHHCCCC GQRCWRKPRALEPAWNMRAVPSRVPAFAIVRGPMTSATGLLSRRDFLAGAAALPLAAGGL HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC GRAMATPLNAPFSVGAFRIMPILDGPFGLTPALIPDADSVEGEKLVERAGLPKLGPWPQP CHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC VNVFAINRGDRFYVVDAGAGATLGPDLGKAAERLAAVGVPPERVNALLMTHLHADHAGGL CEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCE MKADGTALFPNAELVVQQMEVAFWSDDGAMSRMPTSMEPMFMIARKALEAYKGRVRTVNG EECCCCEECCCHHHHHHHHHHEEECCCCCHHCCCCCCCHHHHHHHHHHHHHCCEEEEECC SGEAVPGITFVPLPGHTPGHAGFLLADGKEQFLIFADTIHSALLQFPHPAWTVVFDVDAS CCCCCCCEEEEECCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHCCCCCEEEEEECCCH LAAATRRGILDRLVIDKIGVTGSHIPDRGRIIARQAGYVLVD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA