| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425548
Identifier: 158425548
GI number: 158425548
Start: 4487390
End: 4487644
Strand: Reverse
Name: 158425548
Synonym: AZC_3924
Alternate gene names: NA
Gene position: 4487644-4487390 (Counterclockwise)
Preceding gene: 158425549
Following gene: 158425547
Centisome position: 83.57
GC content: 61.57
Gene sequence:
>255_bases ATGACCGATCACGAATGTGAAATCCGGTCCGTGGATGGTAGTTGGGAGGCCGTCGGGGTCGAGGAGGCCTTGGGCTTACC GTCCAGCCTTCTCAAGCGTTGTCCCGAATGTCACGGACGGGTCCGGGTGCATCGGGCCAGCGTGAACGGTATGCGTGCGC ATTTCGAGCACATGGAGGCGCACCGCGGGTGCTCACTGTCCCGGGGTGTACAATTCTCTGGTGTTTCGTCCCCGCATCCC GCAGCTCTCGACTAA
Upstream 100 bases:
>100_bases GAAATATCGCGAGAGCATGAACATCCCGTCCTCGGTCCAGCGCCGCCGCGAAAAGCAGGCCCTGCGCAGCGACGCCGCCG CCGCCGGCTGAGAGGCGAAG
Downstream 100 bases:
>100_bases GGTCAGTCTGGGGCGACGACGGTAGCGCTGGACATGCCCCGGCCGGTCGAGCGACCCTTACGTCAAACAAGAAAGCCGGC CAGCGTCCGGACGGGAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF3
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MTDHECEIRSVDGSWEAVGVEEALGLPSSLLKRCPECHGRVRVHRASVNGMRAHFEHMEAHRGCSLSRGVQFSGVSSPHP AALD
Sequences:
>Translated_84_residues MTDHECEIRSVDGSWEAVGVEEALGLPSSLLKRCPECHGRVRVHRASVNGMRAHFEHMEAHRGCSLSRGVQFSGVSSPHP AALD >Mature_83_residues TDHECEIRSVDGSWEAVGVEEALGLPSSLLKRCPECHGRVRVHRASVNGMRAHFEHMEAHRGCSLSRGVQFSGVSSPHPA ALD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3924_AZOC5 (P33988)
Other databases:
- EMBL: AP009384 - EMBL: X69959 - PIR: S33581 - RefSeq: YP_001526840.1 - GeneID: 5688443 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_3924 - ProtClustDB: CLSK2329001 - BioCyc: ACAU438753:AZC_3924-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9162; Mature: 9031
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHECEIRSVDGSWEAVGVEEALGLPSSLLKRCPECHGRVRVHRASVNGMRAHFEHMEA CCCCCCEEEECCCCCCEECHHHHHCCCHHHHHHCHHCCCCEEEEECCCCCHHHHHHHHHH HRGCSLSRGVQFSGVSSPHPAALD HCCCCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure TDHECEIRSVDGSWEAVGVEEALGLPSSLLKRCPECHGRVRVHRASVNGMRAHFEHMEA CCCCCEEEECCCCCCEECHHHHHCCCHHHHHHCHHCCCCEEEEECCCCCHHHHHHHHHH HRGCSLSRGVQFSGVSSPHPAALD HCCCCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8471796