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The map label for this gene is trbI [H]

Identifier: 158425491

GI number: 158425491

Start: 4418346

End: 4419527

Strand: Direct

Name: trbI [H]

Synonym: AZC_3867

Alternate gene names: 158425491

Gene position: 4418346-4419527 (Clockwise)

Preceding gene: 158425490

Following gene: 158425492

Centisome position: 82.28

GC content: 67.94

Gene sequence:

>1182_bases
ATGAGCAGCCCCGACAATCATGACATCGAGGCGGATTTCGGCGCTCCGACCACCGATCACGCCGCGGCCATGCGGCTGCG
TACAGAGCCGCCGCGCGTCACGCGTCTCTCGCGCAAGGTCCTCGCTGGCGCCGGGCTGGTTGTCAGCCTCGGCATAGGCG
GCGCCCTGATCTATGCGCTGCAGGGTCGCGACAAGGGCACCGGCGGCGAGGAACTCTACTCCACCCAGAACCGCTCCACG
GCCGATGGCCTTGCCGGCCTGCCACGGGACTATACCGGGCCGATCCTGGGTCCGCCGCTGCCCGGCGATCTCGGCCGGCC
GATCCTTGAGGCGCAGAACCGCGGCCAGCCCGTCGTGCCGCCGACAATGACAGCGCCACAGGTGGATCCTGAGCAGCAGC
GGCGTCTTGCGGAACAGGAAGCCGCGCGGACCAGTCGCGTATTCTTCCAGGCGGCGCAGGCCCGCGCGCCGGCGTCGTCA
GTGGCGAGTGCTTCCGGCTTCAGCGGCCCTGGCTCGGCAGGAACGGGCGGCACGTCCTCACCCCAGGATCGCCAGCTTGC
CTTCCTCAATGCCACTGTGGATCGGCGCGTTGTCGCGTCCGATCGCGTCATGGCGCCGGCATCGCCTTATGTGCTGCAGG
CGGGCGCCGTCATCCCGGCCGCGCTGATCACCGGCATCCGCTCCGATTTGCCCGGCCAGATCACCGCCCAGGTCACCGAG
AACGTCTATGACAGCCCGACCGGACGCATCATGATCATTCCGCAGGGCACGCGGCTGCTCGGCCAGTACGACATTGGTGT
CGGCTTCGGTCAGCGCCGGATCCTGCTGGTCTGGAGCCGGCTGATCTTCCCCAATGGCCGCTCCATCGTGCTGGAGCGCC
AGCCCGGCACCGATGCGCAGGGCTATGCCGGCCTCGAGGACGGCGTCGACATGCACTGGTGGGACCTCGCCAAGGCGGTT
GGCCTCTCGACGCTGCTCTCCGTCAGCGCCGAGCTCGCCATGGATGATCAGGATGCATTGATTCAGGCGCTCCAAAGCGG
GGCGCAGGACACCATCAATAATGCCGGCCAGGAGATCATCCGCCGGCAGTTAAACGTCGCACCCACCCTGACCATCCGGC
CCGGCTTCCCGGTGCGGGTCATGGTCACCCGTGACCTCGTCCTCGAGCCCTACAGGTACTGA

Upstream 100 bases:

>100_bases
TGATCGTCGACCGGCTGTTCGGTGCCGCCGAACTGCGCCTCGGTGGCGGCGAGCGCCCGCAGAAGGTGCGGATCGAGCGC
ACGGACGGGAGGCCGGCATC

Downstream 100 bases:

>100_bases
CCATGACGAAGCTGAAACTCGGACCCATCGCGAACGACAAGCCGGTGAAGGTGGCGCTCTCGCTACCCGGCGCGCTGCAC
CGCGATCTTGTCGCGTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MSSPDNHDIEADFGAPTTDHAAAMRLRTEPPRVTRLSRKVLAGAGLVVSLGIGGALIYALQGRDKGTGGEELYSTQNRST
ADGLAGLPRDYTGPILGPPLPGDLGRPILEAQNRGQPVVPPTMTAPQVDPEQQRRLAEQEAARTSRVFFQAAQARAPASS
VASASGFSGPGSAGTGGTSSPQDRQLAFLNATVDRRVVASDRVMAPASPYVLQAGAVIPAALITGIRSDLPGQITAQVTE
NVYDSPTGRIMIIPQGTRLLGQYDIGVGFGQRRILLVWSRLIFPNGRSIVLERQPGTDAQGYAGLEDGVDMHWWDLAKAV
GLSTLLSVSAELAMDDQDALIQALQSGAQDTINNAGQEIIRRQLNVAPTLTIRPGFPVRVMVTRDLVLEPYRY

Sequences:

>Translated_393_residues
MSSPDNHDIEADFGAPTTDHAAAMRLRTEPPRVTRLSRKVLAGAGLVVSLGIGGALIYALQGRDKGTGGEELYSTQNRST
ADGLAGLPRDYTGPILGPPLPGDLGRPILEAQNRGQPVVPPTMTAPQVDPEQQRRLAEQEAARTSRVFFQAAQARAPASS
VASASGFSGPGSAGTGGTSSPQDRQLAFLNATVDRRVVASDRVMAPASPYVLQAGAVIPAALITGIRSDLPGQITAQVTE
NVYDSPTGRIMIIPQGTRLLGQYDIGVGFGQRRILLVWSRLIFPNGRSIVLERQPGTDAQGYAGLEDGVDMHWWDLAKAV
GLSTLLSVSAELAMDDQDALIQALQSGAQDTINNAGQEIIRRQLNVAPTLTIRPGFPVRVMVTRDLVLEPYRY
>Mature_392_residues
SSPDNHDIEADFGAPTTDHAAAMRLRTEPPRVTRLSRKVLAGAGLVVSLGIGGALIYALQGRDKGTGGEELYSTQNRSTA
DGLAGLPRDYTGPILGPPLPGDLGRPILEAQNRGQPVVPPTMTAPQVDPEQQRRLAEQEAARTSRVFFQAAQARAPASSV
ASASGFSGPGSAGTGGTSSPQDRQLAFLNATVDRRVVASDRVMAPASPYVLQAGAVIPAALITGIRSDLPGQITAQVTEN
VYDSPTGRIMIIPQGTRLLGQYDIGVGFGQRRILLVWSRLIFPNGRSIVLERQPGTDAQGYAGLEDGVDMHWWDLAKAVG
LSTLLSVSAELAMDDQDALIQALQSGAQDTINNAGQEIIRRQLNVAPTLTIRPGFPVRVMVTRDLVLEPYRY

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 41759; Mature: 41628

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPDNHDIEADFGAPTTDHAAAMRLRTEPPRVTRLSRKVLAGAGLVVSLGIGGALIYAL
CCCCCCCCEEECCCCCCCCHHHHHEECCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEE
QGRDKGTGGEELYSTQNRSTADGLAGLPRDYTGPILGPPLPGDLGRPILEAQNRGQPVVP
ECCCCCCCHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCC
PTMTAPQVDPEQQRRLAEQEAARTSRVFFQAAQARAPASSVASASGFSGPGSAGTGGTSS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCC
PQDRQLAFLNATVDRRVVASDRVMAPASPYVLQAGAVIPAALITGIRSDLPGQITAQVTE
CCCCEEEEEECCHHHEEHHCCCEECCCCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHH
NVYDSPTGRIMIIPQGTRLLGQYDIGVGFGQRRILLVWSRLIFPNGRSIVLERQPGTDAQ
HHHCCCCCEEEEEECCCEEEEEEECCCCCCCCHHHEEHHHHHCCCCCEEEEECCCCCCCC
GYAGLEDGVDMHWWDLAKAVGLSTLLSVSAELAMDDQDALIQALQSGAQDTINNAGQEII
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHH
RRQLNVAPTLTIRPGFPVRVMVTRDLVLEPYRY
HHHHCCCCEEEECCCCCEEEEEECCHHCCCCCC
>Mature Secondary Structure 
SSPDNHDIEADFGAPTTDHAAAMRLRTEPPRVTRLSRKVLAGAGLVVSLGIGGALIYAL
CCCCCCCEEECCCCCCCCHHHHHEECCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEE
QGRDKGTGGEELYSTQNRSTADGLAGLPRDYTGPILGPPLPGDLGRPILEAQNRGQPVVP
ECCCCCCCHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCC
PTMTAPQVDPEQQRRLAEQEAARTSRVFFQAAQARAPASSVASASGFSGPGSAGTGGTSS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCC
PQDRQLAFLNATVDRRVVASDRVMAPASPYVLQAGAVIPAALITGIRSDLPGQITAQVTE
CCCCEEEEEECCHHHEEHHCCCEECCCCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHH
NVYDSPTGRIMIIPQGTRLLGQYDIGVGFGQRRILLVWSRLIFPNGRSIVLERQPGTDAQ
HHHCCCCCEEEEEECCCEEEEEEECCCCCCCCHHHEEHHHHHCCCCCEEEEECCCCCCCC
GYAGLEDGVDMHWWDLAKAVGLSTLLSVSAELAMDDQDALIQALQSGAQDTINNAGQEII
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHH
RRQLNVAPTLTIRPGFPVRVMVTRDLVLEPYRY
HHHHCCCCEEEECCCCCEEEEEECCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]