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The map label for this gene is 158425473

Identifier: 158425473

GI number: 158425473

Start: 4403201

End: 4403719

Strand: Reverse

Name: 158425473

Synonym: AZC_3849

Alternate gene names: NA

Gene position: 4403719-4403201 (Counterclockwise)

Preceding gene: 158425480

Following gene: 158425471

Centisome position: 82.01

GC content: 62.04

Gene sequence:

>519_bases
ATGGGCCAGGTTCTCCATCGGTGCGCCACGACGACAGATGCGGTCCGTCGAGCGATACAGCACAGTCAAGAGAGCCTAAG
GGCCCGGGCGAAGCGCGACGGGATTAACCAGAAAACAGCCCCCAGGTGGAAGCAGCGCAATTCAGTTGCCGACCTGCCGA
CCGGCCCGAAAGCCCCGAAGTCAACGGTTCTGTCTGTCGAGGAAGAGGCGATCATCGTCGCCTTCCGGCACCACACGTTG
CTGCCGCGGGACGATTGCCTGTACGCGCTGCAGGCGACGATCCCGCATCTGACGCGCACGTCCCTGAATTGCTGCCTGCA
GCGCCAAGGCATTAGCCGGCTACCAGAGATCGCAGGCGACAAGGAGACGAAGAAGCGGTTCAAATCCTACCCGATCGGTG
TCTTCCACATCGACATCGCCGAGGTTCAGACCGCCGAGGGCGAGCTCTACCTGTTCGTAGCCGTCGATGGCTCGAGCAAG
TTGCCTCCGTGCAACTGGTGGACAGCGCGAACAGGGTGA

Upstream 100 bases:

>100_bases
ACCCACGGGCTACTTCGGTTCCGTCACCTTCGGACGCGAGTCTAGGTTTGATCCCGGATTTTGATCGTGCAGTCTTTTCG
CAGGAATGGAAGGATGCGCT

Downstream 100 bases:

>100_bases
CAGCGTCGGCCGTCGGCCGTCGGCCGTCGGCCGCCAGCGTCAGCGATACGAGGGTCTGGCAGTTGGAGATCTTGCTCAGG
GCCGAGGCGTATTGCGGAGC

Product: integrase

Products: NA

Alternate protein names: Transposase; Transcriptional Regulator; Integrase Catalytic Subunit; Integrase; Integrase Protein; Integrase Catalytic Domain-Containing Protein; Integrase Catalytic Core; Fis Family Transcriptional Regulator; LOW QUALITY PROTEIN Integrase Catalytic Subunit; Instegrase; Transposase Of

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MGQVLHRCATTTDAVRRAIQHSQESLRARAKRDGINQKTAPRWKQRNSVADLPTGPKAPKSTVLSVEEEAIIVAFRHHTL
LPRDDCLYALQATIPHLTRTSLNCCLQRQGISRLPEIAGDKETKKRFKSYPIGVFHIDIAEVQTAEGELYLFVAVDGSSK
LPPCNWWTARTG

Sequences:

>Translated_172_residues
MGQVLHRCATTTDAVRRAIQHSQESLRARAKRDGINQKTAPRWKQRNSVADLPTGPKAPKSTVLSVEEEAIIVAFRHHTL
LPRDDCLYALQATIPHLTRTSLNCCLQRQGISRLPEIAGDKETKKRFKSYPIGVFHIDIAEVQTAEGELYLFVAVDGSSK
LPPCNWWTARTG
>Mature_171_residues
GQVLHRCATTTDAVRRAIQHSQESLRARAKRDGINQKTAPRWKQRNSVADLPTGPKAPKSTVLSVEEEAIIVAFRHHTLL
PRDDCLYALQATIPHLTRTSLNCCLQRQGISRLPEIAGDKETKKRFKSYPIGVFHIDIAEVQTAEGELYLFVAVDGSSKL
PPCNWWTARTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19241; Mature: 19110

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQVLHRCATTTDAVRRAIQHSQESLRARAKRDGINQKTAPRWKQRNSVADLPTGPKAPK
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCC
STVLSVEEEAIIVAFRHHTLLPRDDCLYALQATIPHLTRTSLNCCLQRQGISRLPEIAGD
CCEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KETKKRFKSYPIGVFHIDIAEVQTAEGELYLFVAVDGSSKLPPCNWWTARTG
HHHHHHHHHCCCEEEEEEHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GQVLHRCATTTDAVRRAIQHSQESLRARAKRDGINQKTAPRWKQRNSVADLPTGPKAPK
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCC
STVLSVEEEAIIVAFRHHTLLPRDDCLYALQATIPHLTRTSLNCCLQRQGISRLPEIAGD
CCEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KETKKRFKSYPIGVFHIDIAEVQTAEGELYLFVAVDGSSKLPPCNWWTARTG
HHHHHHHHHCCCEEEEEEHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA