| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is bisC [C]
Identifier: 158425404
GI number: 158425404
Start: 4335044
End: 4337305
Strand: Direct
Name: bisC [C]
Synonym: AZC_3780
Alternate gene names: 158425404
Gene position: 4335044-4337305 (Clockwise)
Preceding gene: 158425403
Following gene: 158425405
Centisome position: 80.73
GC content: 70.2
Gene sequence:
>2262_bases GTGACCGCTGACGAGCGGCTGCACCTCTTCGGCAGCCACTTCGGCACCTATGAGGTGGAGGCGGGCCCCGACGGCCGCCC CCGCCTTCTGCCCTTCCGCCATGACCCCGCGCCCTCTCCTACGGGAGCGGCCTTCCTCGATCTCGCGGACCATCCGCTGC GGGTGCGCCATCCCATGGTCCGGCGGGGCTGGCTCACCGCCAAGGGACGGCCGCAGGGGCGCGGCGCGGAGCGCGGACGG GACGATTTTGTCGCCGTGACATGGCCCGAGGCGGCCCGGCTGGTGGCCGGCGAGATTGCGCGCGTTTCGGGCGATTACGG CAATGCGGCCATCTTCGGCGGCTCCTATGGCTGGGCGAGCGCCGGGCGCTTCCACCATGCCCAGAGCCAGCTGAAGCGCT TCCTGAACCTCTGCGGCGGCTTCACCTCCTCGGTGAACACTTACAGCTATGGCGCCGCCGCAGTGCTGCTGCCCCACGTG ATCGGCCGGGAATACCAGGGCGCGACAGACACAGCGCCGAGCTGGGACCAGATTGCCGCCCACGCGCGCCTTCTCATCTC CTTCGGCGGCTTCCGCCTCTCCAACGCGCAGGTGGAAGCGGGCGGCACCGGGCAGCATCGCGCCGAGGCGGCGCTGGCAG ACGTGGCGCGCGCCGGCTGCCGGATCGTCGTCTTCTCCCCCACGGGCGCGGACGCGCCCGGCCTGCCGGGCCGTGTGGAG CACGTCCCGCTGCGGCCCGGCACGGACGCCGCCGTGCTGATCGCCATGGCGCAGGTGCTGCTGGCGGAGGGGCGGACGGA CACGGAGGCCCTCGCGCGCCTGACCGTGGGCCATGAGGCGTTTGCCGCCTATCTGGCGGGCAGTCCCGACGGCCAGCCGA AGACACCGGAATGGGCAGAGGGCATCTCCGGCGTGCCGGCGGCGACCATCCGGGAACTCGCGCGTGCCTATGCTCAGGTG CCAGCGCTGGTGAACCTCTCCTGGTCATTGCAGCGCTCGCGCCATGGGGAGCAGCCTTATTGGGCGGCGATTGCCCTTGC CGCCATGGCCGGGCAGGTGGGGCGGCCGGGATGCGGATTTGCCTTCGGACTCACCGCCGTCTCCTCCGTGGGCCAGCCGA TCCGCCGGCTGAAGGGGCCGGCGGTGACGCAAGGGCGCAATCCGGTTTCAAGCTTCATTCCCGTCGCCCGCATCACCGAG TTGCTGGAGAACCCCGGCGGCACGCTCGACTATGACGGGCAGAGGCTCGCCCTCCCGAACATCCGCCTCGTCCATTGGGC GGGCGGCAACCCCTTCCACCACCATCAGGATCTGAACCGGCTCGCCGCCGCCTTCCGGCGCCCGGAAACGGTGATCGTGC ATGAGAGCGTGTGGACCGCCACCGCCCGGCACGCGGACATCGTGCTGCCCGCGAGCCTGCCCTTCGAGCGAGACGATGTC GCCGCCGCCTCCCGCGACAACTGGCTCATTGCCTCCCGCCGTGTGCTGGCAACGCCGCCGGACGTGCGCTCCGATCACGA CATGCTCGCGCTTATCGCCCGCGAACTCGGCCTTGACGCCGCCTTCACCGAGGGGCGCAGCGAAGAGGATTGGCTGCGCC ATCTCTATGCGGGCTACCGCGACGCCCATCCCGAACTGCCGGATTTCGACACCTTCTGGGCCCGCGGCTATGCTGGGCTC GACCTCGGCGCACCCGCGCCTGCCCCCACAACGCCGCTCGCCGATTTTGCACGCGACCCGGATCTGCACCCGCTCTCTAC TCCTTCGGGTCGCATCGAGATCGGATCTTCGACGATCGCGGCCTTCGGTTATGACGACTGCCCCGGCCATCCCGCATGGC TGGAGCCGGAGGAATGGCTGGGGGCGCCGCTTGCCGGCACCTATCCGCTGCATCTGCTCTCTCCCCAACCAGAACACCGG CTGCACAGCCAGCTGGAACTGGCCGGCCCCAGCCAGCAGGCGAAGGTGACCGGCTGCGAAGTTCTGCTGCTCAGCCCACA GGATGCCGCCGCCCGCGGGCTGGCGGCGGGAGAACAGGCGACCGTCTTCAATGCGCGCGGTCGCGCTCTTGTCGCCATCG GCATTGATAACCGGCTGTCACCGGGCGTCGCCGTTCTGCCTACGGGAGGCTGGTACGCCCCGAATGAGCAGGGCCTCGAT CTCGGCGGCAATCCCAACACGCTGAGCTCGATCCGCCCGACCTCACGGCTCGCACAAGGCACCGCGCCCAACGCGTGTCT GGTCGAGGTCGTCAGCCGATAA
Upstream 100 bases:
>100_bases GCCCAACACCTATGGCACCTCCAAGCGCGTGGTGTGGCAGCCCCGTGCCGACGACTGGGTGCGCGCCTACGACCTGAAGC CGGCGGCCAAGTGAGCCGTC
Downstream 100 bases:
>100_bases AACAGGGCGTGAAACGCAGGGAGCGCTCGGGACGGTCCAGGCGGCGCCAAAGAACATTTCTAACAATTTATACAATCTAA AATAGATTAAATAGCTAACT
Product: oxidoreductase
Products: Biotin. [C]
Alternate protein names: BDS reductase; BSO reductase [H]
Number of amino acids: Translated: 753; Mature: 752
Protein sequence:
>753_residues MTADERLHLFGSHFGTYEVEAGPDGRPRLLPFRHDPAPSPTGAAFLDLADHPLRVRHPMVRRGWLTAKGRPQGRGAERGR DDFVAVTWPEAARLVAGEIARVSGDYGNAAIFGGSYGWASAGRFHHAQSQLKRFLNLCGGFTSSVNTYSYGAAAVLLPHV IGREYQGATDTAPSWDQIAAHARLLISFGGFRLSNAQVEAGGTGQHRAEAALADVARAGCRIVVFSPTGADAPGLPGRVE HVPLRPGTDAAVLIAMAQVLLAEGRTDTEALARLTVGHEAFAAYLAGSPDGQPKTPEWAEGISGVPAATIRELARAYAQV PALVNLSWSLQRSRHGEQPYWAAIALAAMAGQVGRPGCGFAFGLTAVSSVGQPIRRLKGPAVTQGRNPVSSFIPVARITE LLENPGGTLDYDGQRLALPNIRLVHWAGGNPFHHHQDLNRLAAAFRRPETVIVHESVWTATARHADIVLPASLPFERDDV AAASRDNWLIASRRVLATPPDVRSDHDMLALIARELGLDAAFTEGRSEEDWLRHLYAGYRDAHPELPDFDTFWARGYAGL DLGAPAPAPTTPLADFARDPDLHPLSTPSGRIEIGSSTIAAFGYDDCPGHPAWLEPEEWLGAPLAGTYPLHLLSPQPEHR LHSQLELAGPSQQAKVTGCEVLLLSPQDAAARGLAAGEQATVFNARGRALVAIGIDNRLSPGVAVLPTGGWYAPNEQGLD LGGNPNTLSSIRPTSRLAQGTAPNACLVEVVSR
Sequences:
>Translated_753_residues MTADERLHLFGSHFGTYEVEAGPDGRPRLLPFRHDPAPSPTGAAFLDLADHPLRVRHPMVRRGWLTAKGRPQGRGAERGR DDFVAVTWPEAARLVAGEIARVSGDYGNAAIFGGSYGWASAGRFHHAQSQLKRFLNLCGGFTSSVNTYSYGAAAVLLPHV IGREYQGATDTAPSWDQIAAHARLLISFGGFRLSNAQVEAGGTGQHRAEAALADVARAGCRIVVFSPTGADAPGLPGRVE HVPLRPGTDAAVLIAMAQVLLAEGRTDTEALARLTVGHEAFAAYLAGSPDGQPKTPEWAEGISGVPAATIRELARAYAQV PALVNLSWSLQRSRHGEQPYWAAIALAAMAGQVGRPGCGFAFGLTAVSSVGQPIRRLKGPAVTQGRNPVSSFIPVARITE LLENPGGTLDYDGQRLALPNIRLVHWAGGNPFHHHQDLNRLAAAFRRPETVIVHESVWTATARHADIVLPASLPFERDDV AAASRDNWLIASRRVLATPPDVRSDHDMLALIARELGLDAAFTEGRSEEDWLRHLYAGYRDAHPELPDFDTFWARGYAGL DLGAPAPAPTTPLADFARDPDLHPLSTPSGRIEIGSSTIAAFGYDDCPGHPAWLEPEEWLGAPLAGTYPLHLLSPQPEHR LHSQLELAGPSQQAKVTGCEVLLLSPQDAAARGLAAGEQATVFNARGRALVAIGIDNRLSPGVAVLPTGGWYAPNEQGLD LGGNPNTLSSIRPTSRLAQGTAPNACLVEVVSR >Mature_752_residues TADERLHLFGSHFGTYEVEAGPDGRPRLLPFRHDPAPSPTGAAFLDLADHPLRVRHPMVRRGWLTAKGRPQGRGAERGRD DFVAVTWPEAARLVAGEIARVSGDYGNAAIFGGSYGWASAGRFHHAQSQLKRFLNLCGGFTSSVNTYSYGAAAVLLPHVI GREYQGATDTAPSWDQIAAHARLLISFGGFRLSNAQVEAGGTGQHRAEAALADVARAGCRIVVFSPTGADAPGLPGRVEH VPLRPGTDAAVLIAMAQVLLAEGRTDTEALARLTVGHEAFAAYLAGSPDGQPKTPEWAEGISGVPAATIRELARAYAQVP ALVNLSWSLQRSRHGEQPYWAAIALAAMAGQVGRPGCGFAFGLTAVSSVGQPIRRLKGPAVTQGRNPVSSFIPVARITEL LENPGGTLDYDGQRLALPNIRLVHWAGGNPFHHHQDLNRLAAAFRRPETVIVHESVWTATARHADIVLPASLPFERDDVA AASRDNWLIASRRVLATPPDVRSDHDMLALIARELGLDAAFTEGRSEEDWLRHLYAGYRDAHPELPDFDTFWARGYAGLD LGAPAPAPTTPLADFARDPDLHPLSTPSGRIEIGSSTIAAFGYDDCPGHPAWLEPEEWLGAPLAGTYPLHLLSPQPEHRL HSQLELAGPSQQAKVTGCEVLLLSPQDAAARGLAAGEQATVFNARGRALVAIGIDNRLSPGVAVLPTGGWYAPNEQGLDL GGNPNTLSSIRPTSRLAQGTAPNACLVEVVSR
Specific function: This enzyme may serve as a scavenger, allowing the cell to utilize biotin sulfoxide as a biotin source. It reduces a spontaneous oxidation product of biotin, D-biotin D-sulfoxide (BSO or BDS), back to biotin [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI145693196, Length=722, Percent_Identity=38.6426592797784, Blast_Score=462, Evalue=1e-131, Organism=Escherichia coli, GI87081994, Length=719, Percent_Identity=35.326842837274, Blast_Score=436, Evalue=1e-123, Organism=Escherichia coli, GI1787231, Length=775, Percent_Identity=37.5483870967742, Blast_Score=435, Evalue=1e-123, Organism=Escherichia coli, GI87081797, Length=737, Percent_Identity=29.0366350067843, Blast_Score=270, Evalue=2e-73, Organism=Escherichia coli, GI171474008, Length=740, Percent_Identity=29.4594594594595, Blast_Score=251, Evalue=1e-67, Organism=Escherichia coli, GI1787870, Length=743, Percent_Identity=29.07133243607, Blast_Score=244, Evalue=2e-65, Organism=Escherichia coli, GI3868721, Length=339, Percent_Identity=25.6637168141593, Blast_Score=90, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 80253; Mature: 80122
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADERLHLFGSHFGTYEVEAGPDGRPRLLPFRHDPAPSPTGAAFLDLADHPLRVRHPMV CCCCCEEHEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHCCCHH RRGWLTAKGRPQGRGAERGRDDFVAVTWPEAARLVAGEIARVSGDYGNAAIFGGSYGWAS HCCEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC AGRFHHAQSQLKRFLNLCGGFTSSVNTYSYGAAAVLLPHVIGREYQGATDTAPSWDQIAA CCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHH HARLLISFGGFRLSNAQVEAGGTGQHRAEAALADVARAGCRIVVFSPTGADAPGLPGRVE HHHHEEEECCEEECCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCE HVPLRPGTDAAVLIAMAQVLLAEGRTDTEALARLTVGHEAFAAYLAGSPDGQPKTPEWAE EECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHH GISGVPAATIRELARAYAQVPALVNLSWSLQRSRHGEQPYWAAIALAAMAGQVGRPGCGF CCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCH AFGLTAVSSVGQPIRRLKGPAVTQGRNPVSSFIPVARITELLENPGGTLDYDGQRLALPN HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCEEECCC IRLVHWAGGNPFHHHQDLNRLAAAFRRPETVIVHESVWTATARHADIVLPASLPFERDDV EEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCEEEECCCCCCCCCH AAASRDNWLIASRRVLATPPDVRSDHDMLALIARELGLDAAFTEGRSEEDWLRHLYAGYR HHCCCCCEEEECCEEECCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHH DAHPELPDFDTFWARGYAGLDLGAPAPAPTTPLADFARDPDLHPLSTPSGRIEIGSSTIA CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCEEE AFGYDDCPGHPAWLEPEEWLGAPLAGTYPLHLLSPQPEHRLHSQLELAGPSQQAKVTGCE EECCCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCCHHHHHHHHEECCCCCCCCEECCEE VLLLSPQDAAARGLAAGEQATVFNARGRALVAIGIDNRLSPGVAVLPTGGWYAPNEQGLD EEEECCCCHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEECCCEECCCCCCCC LGGNPNTLSSIRPTSRLAQGTAPNACLVEVVSR CCCCCCCHHHCCCHHHHHCCCCCCHHHHHHHCC >Mature Secondary Structure TADERLHLFGSHFGTYEVEAGPDGRPRLLPFRHDPAPSPTGAAFLDLADHPLRVRHPMV CCCCEEHEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHCCCHH RRGWLTAKGRPQGRGAERGRDDFVAVTWPEAARLVAGEIARVSGDYGNAAIFGGSYGWAS HCCEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC AGRFHHAQSQLKRFLNLCGGFTSSVNTYSYGAAAVLLPHVIGREYQGATDTAPSWDQIAA CCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHH HARLLISFGGFRLSNAQVEAGGTGQHRAEAALADVARAGCRIVVFSPTGADAPGLPGRVE HHHHEEEECCEEECCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCE HVPLRPGTDAAVLIAMAQVLLAEGRTDTEALARLTVGHEAFAAYLAGSPDGQPKTPEWAE EECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHH GISGVPAATIRELARAYAQVPALVNLSWSLQRSRHGEQPYWAAIALAAMAGQVGRPGCGF CCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCH AFGLTAVSSVGQPIRRLKGPAVTQGRNPVSSFIPVARITELLENPGGTLDYDGQRLALPN HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCEEECCC IRLVHWAGGNPFHHHQDLNRLAAAFRRPETVIVHESVWTATARHADIVLPASLPFERDDV EEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCEEEECCCCCCCCCH AAASRDNWLIASRRVLATPPDVRSDHDMLALIARELGLDAAFTEGRSEEDWLRHLYAGYR HHCCCCCEEEECCEEECCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHH DAHPELPDFDTFWARGYAGLDLGAPAPAPTTPLADFARDPDLHPLSTPSGRIEIGSSTIA CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCEEE AFGYDDCPGHPAWLEPEEWLGAPLAGTYPLHLLSPQPEHRLHSQLELAGPSQQAKVTGCE EECCCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCCHHHHHHHHEECCCCCCCCEECCEE VLLLSPQDAAARGLAAGEQATVFNARGRALVAIGIDNRLSPGVAVLPTGGWYAPNEQGLD EEEECCCCHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEECCCEECCCCCCCC LGGNPNTLSSIRPTSRLAQGTAPNACLVEVVSR CCCCCCCHHHCCCHHHHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), [C]
Specific reaction: Reduces A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), Back To Biotin. [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7733660 [H]