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The map label for this gene is ybiX [C]

Identifier: 158425377

GI number: 158425377

Start: 4306016

End: 4306696

Strand: Reverse

Name: ybiX [C]

Synonym: AZC_3753

Alternate gene names: 158425377

Gene position: 4306696-4306016 (Counterclockwise)

Preceding gene: 158425378

Following gene: 158425376

Centisome position: 80.2

GC content: 67.69

Gene sequence:

>681_bases
ATGATGATCCATATTCCCAAGGTGCTGACCCCGGAGCAGGTCGCCCGCTGTCGCGCCGTGATGGATGCGGCGGGCTGGGT
GGACGGGCGCTCCACCGCCGGCGCGCAGGCCGTGCATGTGAAGAAGAACCTCCAGCTGCCCGACGGCAGCGCCGAGGCGC
GCGAGCTGGGCGAGATGGTGCGCGCCGCCCTCCAGCGCTCGGCCCTGTTCACCTCCGCCGTCCTGCCCCGGCGCATCCTG
CCGCCCATGTTCAACCGCTATGATGCGGGCATGACCTTCGGCTCCCACGTGGACAACGCCATCCGCTTCGTGCGGGACAG
CGGCGAGCCGCTGCGCACCGACGTCTCCACCACGCTCTTCCTCTCCGAGCCGGACGAGTATGAGGGCGGCGAACTGGTGG
TGGAGGATACCTATGGGGCTCACAAGGTGAAGCTGCCGGCGGGCGATGCCATCGTCTATCCCGCGACCTCCCTGCACCAT
GTGACGCCCATCACGCGCGGCTCGCGGGTGGCCTCCTTCTTCTGGACGCAGAGCCTCATTCGGGATGCCGGCCAGCGGGC
GCTGCTGTTCGACATGGACATGGCCATCATGCGTCTCAACCAGGACCATCCCGGTCACATCTCGGCGGTCCAGCTCACCG
GCGTCTATCACAACCTCCTGCGCCAATGGGCGGAGGTCTGA

Upstream 100 bases:

>100_bases
CCGGGCGACCTTCTGATCCCGGTTCCCGTCTCCGCCGCCGCGCCTCTCACCGGGCGCGGCGGCTTTTGCGTTTGTTGCGC
CCTGCGCGGAGTGCCTGCCG

Downstream 100 bases:

>100_bases
GCTGCCGCAGCGCAGCACATAAGGGCAGCGTGGAACCTCTCCAGCCTGATTGATTTCGCGGCCCGCGAGGCGCATAAAGC
GGCGATCAAATCGTTTCAAA

Product: hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MMIHIPKVLTPEQVARCRAVMDAAGWVDGRSTAGAQAVHVKKNLQLPDGSAEARELGEMVRAALQRSALFTSAVLPRRIL
PPMFNRYDAGMTFGSHVDNAIRFVRDSGEPLRTDVSTTLFLSEPDEYEGGELVVEDTYGAHKVKLPAGDAIVYPATSLHH
VTPITRGSRVASFFWTQSLIRDAGQRALLFDMDMAIMRLNQDHPGHISAVQLTGVYHNLLRQWAEV

Sequences:

>Translated_226_residues
MMIHIPKVLTPEQVARCRAVMDAAGWVDGRSTAGAQAVHVKKNLQLPDGSAEARELGEMVRAALQRSALFTSAVLPRRIL
PPMFNRYDAGMTFGSHVDNAIRFVRDSGEPLRTDVSTTLFLSEPDEYEGGELVVEDTYGAHKVKLPAGDAIVYPATSLHH
VTPITRGSRVASFFWTQSLIRDAGQRALLFDMDMAIMRLNQDHPGHISAVQLTGVYHNLLRQWAEV
>Mature_226_residues
MMIHIPKVLTPEQVARCRAVMDAAGWVDGRSTAGAQAVHVKKNLQLPDGSAEARELGEMVRAALQRSALFTSAVLPRRIL
PPMFNRYDAGMTFGSHVDNAIRFVRDSGEPLRTDVSTTLFLSEPDEYEGGELVVEDTYGAHKVKLPAGDAIVYPATSLHH
VTPITRGSRVASFFWTQSLIRDAGQRALLFDMDMAIMRLNQDHPGHISAVQLTGVYHNLLRQWAEV

Specific function: Unknown

COG id: COG3128

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain

Homologues:

Organism=Escherichia coli, GI87081784, Length=226, Percent_Identity=51.3274336283186, Blast_Score=235, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3753_AZOC5 (A8INH8)

Other databases:

- EMBL:   AP009384
- RefSeq:   YP_001526669.1
- ProteinModelPortal:   A8INH8
- SMR:   A8INH8
- GeneID:   5690198
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_3753
- HOGENOM:   HBG285605
- OMA:   ADWADGK
- ProtClustDB:   PRK05467
- BioCyc:   ACAU438753:AZC_3753-MONOMER
- HAMAP:   MF_00657
- InterPro:   IPR005123
- InterPro:   IPR006620
- SMART:   SM00702

Pfam domain/function: PF03171 2OG-FeII_Oxy

EC number: 1.14.11.- [C]

Molecular weight: Translated: 24975; Mature: 24975

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS51471 FE2OG_OXY

Important sites: BINDING 169-169

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIHIPKVLTPEQVARCRAVMDAAGWVDGRSTAGAQAVHVKKNLQLPDGSAEARELGEMV
CEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
RAALQRSALFTSAVLPRRILPPMFNRYDAGMTFGSHVDNAIRFVRDSGEPLRTDVSTTLF
HHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEE
LSEPDEYEGGELVVEDTYGAHKVKLPAGDAIVYPATSLHHVTPITRGSRVASFFWTQSLI
EECCCCCCCCEEEEECCCCCEEEECCCCCEEEECCCCCHHCCCCCCCCHHHHHHHHHHHH
RDAGQRALLFDMDMAIMRLNQDHPGHISAVQLTGVYHNLLRQWAEV
HHCCCEEEEEHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MMIHIPKVLTPEQVARCRAVMDAAGWVDGRSTAGAQAVHVKKNLQLPDGSAEARELGEMV
CEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
RAALQRSALFTSAVLPRRILPPMFNRYDAGMTFGSHVDNAIRFVRDSGEPLRTDVSTTLF
HHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEE
LSEPDEYEGGELVVEDTYGAHKVKLPAGDAIVYPATSLHHVTPITRGSRVASFFWTQSLI
EECCCCCCCCEEEEECCCCCEEEECCCCCEEEECCCCCHHCCCCCCCCHHHHHHHHHHHH
RDAGQRALLFDMDMAIMRLNQDHPGHISAVQLTGVYHNLLRQWAEV
HHCCCEEEEEHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA