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The map label for this gene is uidR [C]

Identifier: 158425312

GI number: 158425312

Start: 4234490

End: 4234999

Strand: Direct

Name: uidR [C]

Synonym: AZC_3688

Alternate gene names: 158425312

Gene position: 4234490-4234999 (Clockwise)

Preceding gene: 158425308

Following gene: 158425313

Centisome position: 78.86

GC content: 68.82

Gene sequence:

>510_bases
ATGCAGCAGATCTGCACGGAGGCGGGCATGAGCCCCGGCGCGCTCTATCGCTACTTCCCCTCCAAGGAAGCGATCATCGG
CGCCATCGTGGAGGCCGAGCGCGCGGAGCGCACCCGCCTGTTCGACGCGCTGCGCCAGTCGGAGAGCCTCATGGCCGGCC
TCACCGCCGCCATGGCGGAACTGCTCACGGGGACGCAGTCCATGTGCGACCGCCTGGGCGCGGAGATCTTCGCGGAAGGG
TCGCGCAATCCCAAGCTGCGCGAGCTTCTCGATCCGATGGAGCGCGAAAGCCATCAGATGCTGCGGGACCTGCTCGCCGA
GGCGCAGCGGCGCGGGGAGATCGCGGCCGACGTCGATCTCGAAGCGCTGCAGGTGCTGCTGCTCGCCATCGGCGACGGGC
TGATGCTCAACCATCAGAGATGGCCGCACTTCGACATTCCCGGCCGCCTCGCCGCCCTGTCAGGCCTGATGGGCCGCATG
ATCTCGCCGCGCGGGACGGATGTGCCATGA

Upstream 100 bases:

>100_bases
GACACTCACCGAGCCGCAGGATCACCGGACGGAACAGCGCCAGCGCATCCTCGATGCCGCCGCCACCTGCTTTTCGCGCG
AGGGCTTCCACGGCACGTCC

Downstream 100 bases:

>100_bases
GCCCTCGTCCCGCCACCATTGCCGCGCGCACTGTGCGCAACCTCCGGTTCATCCGTTCCTTCGGAGACGCTTCCATGTCC
GCCCGTCCGGCGCCTGTCCG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; TetR Family Transcriptional Regulatory Protein; Bacterial Regulatory Protein; Transcriptional Regulator UidR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MQQICTEAGMSPGALYRYFPSKEAIIGAIVEAERAERTRLFDALRQSESLMAGLTAAMAELLTGTQSMCDRLGAEIFAEG
SRNPKLRELLDPMERESHQMLRDLLAEAQRRGEIAADVDLEALQVLLLAIGDGLMLNHQRWPHFDIPGRLAALSGLMGRM
ISPRGTDVP

Sequences:

>Translated_169_residues
MQQICTEAGMSPGALYRYFPSKEAIIGAIVEAERAERTRLFDALRQSESLMAGLTAAMAELLTGTQSMCDRLGAEIFAEG
SRNPKLRELLDPMERESHQMLRDLLAEAQRRGEIAADVDLEALQVLLLAIGDGLMLNHQRWPHFDIPGRLAALSGLMGRM
ISPRGTDVP
>Mature_169_residues
MQQICTEAGMSPGALYRYFPSKEAIIGAIVEAERAERTRLFDALRQSESLMAGLTAAMAELLTGTQSMCDRLGAEIFAEG
SRNPKLRELLDPMERESHQMLRDLLAEAQRRGEIAADVDLEALQVLLLAIGDGLMLNHQRWPHFDIPGRLAALSGLMGRM
ISPRGTDVP

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18620; Mature: 18620

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQICTEAGMSPGALYRYFPSKEAIIGAIVEAERAERTRLFDALRQSESLMAGLTAAMAE
CCHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTGTQSMCDRLGAEIFAEGSRNPKLRELLDPMERESHQMLRDLLAEAQRRGEIAADVDL
HHHCHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
EALQVLLLAIGDGLMLNHQRWPHFDIPGRLAALSGLMGRMISPRGTDVP
HHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQQICTEAGMSPGALYRYFPSKEAIIGAIVEAERAERTRLFDALRQSESLMAGLTAAMAE
CCHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTGTQSMCDRLGAEIFAEGSRNPKLRELLDPMERESHQMLRDLLAEAQRRGEIAADVDL
HHHCHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
EALQVLLLAIGDGLMLNHQRWPHFDIPGRLAALSGLMGRMISPRGTDVP
HHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA