| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425296
Identifier: 158425296
GI number: 158425296
Start: 4220870
End: 4221271
Strand: Reverse
Name: 158425296
Synonym: AZC_3672
Alternate gene names: NA
Gene position: 4221271-4220870 (Counterclockwise)
Preceding gene: 158425297
Following gene: 158425295
Centisome position: 78.61
GC content: 63.18
Gene sequence:
>402_bases ATGCCCTTCGTGGTGGACGCCTCCGTCAGTGCCACATGGCTCCTGCCGGACGAGGGAAATCTTGTTGCATCCGCCGCTTA CGAACGGCTGTTGACCGACCATGCGATCGTTCCATCGCTCTGGTGGTTCGAGATGTGCAATATTTTCCTCACCAACGTGC GGCGCGGCCGAGTGACCCGCGAGCAGGCCGATCGGGCCTTGGCCCTGCTTGCGGACCTGCCGATCGCAATTGATCCGGCA CCGGATCATGAACGGTTGATGAGGCTTGCCCGCGCGCACGGGCTCACCGCTTATGACGCCGCTTATCTCGCGCTCGCGGT GCGGGATGGCGTGCCTCTGGTGACTATGGACCAAGCTCTCCATCAGGCTGCCGTCGCCGAAGGCTGTGCCTTCCGGAGCT AG
Upstream 100 bases:
>100_bases CGCGGAAGACCATGGAGGCGATCGCGGCATTTCGCGAGACAATGCCACGGCTCTCGCTCGCCGACATCCAGTCGGCCCGC CGTGAAGGCCATCAGCGCTG
Downstream 100 bases:
>100_bases GCGTCACCCTGGCGGTTGCAGAGGCGAACGCGTCGGTTGTCATTTCCGCCGAACGGACGTTGCGCCGGTTCCCTGAGCCT CCTCCCAACTGGCGGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: PilT Domain-Containing Protein
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MPFVVDASVSATWLLPDEGNLVASAAYERLLTDHAIVPSLWWFEMCNIFLTNVRRGRVTREQADRALALLADLPIAIDPA PDHERLMRLARAHGLTAYDAAYLALAVRDGVPLVTMDQALHQAAVAEGCAFRS
Sequences:
>Translated_133_residues MPFVVDASVSATWLLPDEGNLVASAAYERLLTDHAIVPSLWWFEMCNIFLTNVRRGRVTREQADRALALLADLPIAIDPA PDHERLMRLARAHGLTAYDAAYLALAVRDGVPLVTMDQALHQAAVAEGCAFRS >Mature_132_residues PFVVDASVSATWLLPDEGNLVASAAYERLLTDHAIVPSLWWFEMCNIFLTNVRRGRVTREQADRALALLADLPIAIDPAP DHERLMRLARAHGLTAYDAAYLALAVRDGVPLVTMDQALHQAAVAEGCAFRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14598; Mature: 14467
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFVVDASVSATWLLPDEGNLVASAAYERLLTDHAIVPSLWWFEMCNIFLTNVRRGRVTR CCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EQADRALALLADLPIAIDPAPDHERLMRLARAHGLTAYDAAYLALAVRDGVPLVTMDQAL HHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHHHH HQAAVAEGCAFRS HHHHHHHCCCCCC >Mature Secondary Structure PFVVDASVSATWLLPDEGNLVASAAYERLLTDHAIVPSLWWFEMCNIFLTNVRRGRVTR CEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EQADRALALLADLPIAIDPAPDHERLMRLARAHGLTAYDAAYLALAVRDGVPLVTMDQAL HHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHHHH HQAAVAEGCAFRS HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA