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The map label for this gene is 158425293

Identifier: 158425293

GI number: 158425293

Start: 4218565

End: 4219485

Strand: Reverse

Name: 158425293

Synonym: AZC_3669

Alternate gene names: NA

Gene position: 4219485-4218565 (Counterclockwise)

Preceding gene: 158425295

Following gene: 158425292

Centisome position: 78.58

GC content: 68.51

Gene sequence:

>921_bases
ATGCCGCAAACCGCGTCTGTGCGCGCTCTTAATCCTTTTTTAACCTTAACGCGGTTTCCGCTGGATGATACCGCCGTTCG
TGCGCCCGATCATCGATGGCCGGGGCGGACACTCCCCGTGTTTTGGGTTGCTCTCCTTCCGGCCCGCGCCTATGTGCGAA
GGGTGCTCGATATCACCCGATCCCCTGGGGCGATGCCCCGCCAGCCGGTGTTCAACGTGCCCGGCGTCGTGACTGCCCTC
GCCGCCGCGATGGCGGTGATCCATCTCGTCCGCACCTATGTGCTGAGCGAGGGCGCCGATCTGGAGATCCTCGCGCTCTT
CTCTTTCGTGCCCGGCCGCTATGATGCGGAGGCCGCGCTGGCACTTCCCGGCGGCATCGGCGCCGACATCTGGACCTTCG
TCACTTACGCGCTGCTGCACGCCAACTGGATCCATCTCGGCGTCAATCTGATCTGGATGCTGGCGTTTGCGACGCCGGTG
GCCCGGCGCTTCGGGCCGGCGCGCTTCCTTGCCTTCTTCGCCGTCACGGCGGCGGTGGGGGCCTTCGCCCATCTCATCAC
CCACCGGGACGCGATGGTGCCCATGATCGGCGCCTCGGCGGCCATCGCCGGCCTCATGGCGGCGGCGGTGCGTTTCGCCT
TCGCGCCTGGCGGCTCCCTGAGCGGCCGGCGCGGCCCGCTGCCGGATCACATGCCGGCACAGGGGCTGGGGGAGGCCTTC
CGCGATCCCCGCGTGCTCGGCTTCATGGGCGTCTGGATCGCCGCCAACCTCCTCTTCGGCGTCGGCGTGACCATGCCGGG
GGCGGAAGATGGCGAGGTCGCCTGGCAGGCGCATCTGGGCGGCTTCTTCGCCGGCCTGCTGCTCTTTTCGTTCTTCGATC
CCGTCGGTCGGCGCCTGCCGCGCGAGAAAACCGCCGCGTGA

Upstream 100 bases:

>100_bases
GCGCCCGCCGTGCTGCCGAGAAGCAGGCCGGCCAGGAGCAGCAGTCGCGCGAGAGAAGAGGGCATGAGCGGGTGTTCGCC
TTGCGGTTAACAAAAGGATA

Downstream 100 bases:

>100_bases
ACTGCCCTGACGGCATTCAGAGGTTGCACCCCGAGCGCTTCGGGTGGATCATCCTTGCGTCTGCGCCTGCGCCGGCGCCC
ACAAAAGAAACAAGCCTCCG

Product: rhomboid-like protein precursor

Products: NA

Alternate protein names: Rhomboid-Like Protein; Rhombiod Family Transmembrane Protein; Peptidase Protein; S54 Family Peptidase; Peptidase

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MPQTASVRALNPFLTLTRFPLDDTAVRAPDHRWPGRTLPVFWVALLPARAYVRRVLDITRSPGAMPRQPVFNVPGVVTAL
AAAMAVIHLVRTYVLSEGADLEILALFSFVPGRYDAEAALALPGGIGADIWTFVTYALLHANWIHLGVNLIWMLAFATPV
ARRFGPARFLAFFAVTAAVGAFAHLITHRDAMVPMIGASAAIAGLMAAAVRFAFAPGGSLSGRRGPLPDHMPAQGLGEAF
RDPRVLGFMGVWIAANLLFGVGVTMPGAEDGEVAWQAHLGGFFAGLLLFSFFDPVGRRLPREKTAA

Sequences:

>Translated_306_residues
MPQTASVRALNPFLTLTRFPLDDTAVRAPDHRWPGRTLPVFWVALLPARAYVRRVLDITRSPGAMPRQPVFNVPGVVTAL
AAAMAVIHLVRTYVLSEGADLEILALFSFVPGRYDAEAALALPGGIGADIWTFVTYALLHANWIHLGVNLIWMLAFATPV
ARRFGPARFLAFFAVTAAVGAFAHLITHRDAMVPMIGASAAIAGLMAAAVRFAFAPGGSLSGRRGPLPDHMPAQGLGEAF
RDPRVLGFMGVWIAANLLFGVGVTMPGAEDGEVAWQAHLGGFFAGLLLFSFFDPVGRRLPREKTAA
>Mature_305_residues
PQTASVRALNPFLTLTRFPLDDTAVRAPDHRWPGRTLPVFWVALLPARAYVRRVLDITRSPGAMPRQPVFNVPGVVTALA
AAMAVIHLVRTYVLSEGADLEILALFSFVPGRYDAEAALALPGGIGADIWTFVTYALLHANWIHLGVNLIWMLAFATPVA
RRFGPARFLAFFAVTAAVGAFAHLITHRDAMVPMIGASAAIAGLMAAAVRFAFAPGGSLSGRRGPLPDHMPAQGLGEAFR
DPRVLGFMGVWIAANLLFGVGVTMPGAEDGEVAWQAHLGGFFAGLLLFSFFDPVGRRLPREKTAA

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32790; Mature: 32659

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQTASVRALNPFLTLTRFPLDDTAVRAPDHRWPGRTLPVFWVALLPARAYVRRVLDITR
CCCCCCCHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
SPGAMPRQPVFNVPGVVTALAAAMAVIHLVRTYVLSEGADLEILALFSFVPGRYDAEAAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEE
ALPGGIGADIWTFVTYALLHANWIHLGVNLIWMLAFATPVARRFGPARFLAFFAVTAAVG
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAHLITHRDAMVPMIGASAAIAGLMAAAVRFAFAPGGSLSGRRGPLPDHMPAQGLGEAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
RDPRVLGFMGVWIAANLLFGVGVTMPGAEDGEVAWQAHLGGFFAGLLLFSFFDPVGRRLP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
REKTAA
CHHCCC
>Mature Secondary Structure 
PQTASVRALNPFLTLTRFPLDDTAVRAPDHRWPGRTLPVFWVALLPARAYVRRVLDITR
CCCCCCHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
SPGAMPRQPVFNVPGVVTALAAAMAVIHLVRTYVLSEGADLEILALFSFVPGRYDAEAAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEE
ALPGGIGADIWTFVTYALLHANWIHLGVNLIWMLAFATPVARRFGPARFLAFFAVTAAVG
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAHLITHRDAMVPMIGASAAIAGLMAAAVRFAFAPGGSLSGRRGPLPDHMPAQGLGEAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
RDPRVLGFMGVWIAANLLFGVGVTMPGAEDGEVAWQAHLGGFFAGLLLFSFFDPVGRRLP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
REKTAA
CHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA