| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425260
Identifier: 158425260
GI number: 158425260
Start: 4175167
End: 4175637
Strand: Reverse
Name: 158425260
Synonym: AZC_3636
Alternate gene names: NA
Gene position: 4175637-4175167 (Counterclockwise)
Preceding gene: 158425262
Following gene: 158425259
Centisome position: 77.76
GC content: 63.69
Gene sequence:
>471_bases ATGATCTCGGTCGACGATATTCTGCGCGAGAAGCGCGACACCCGCATCGTGACGGTGCGGATGAACGAGACCATCGCCAC GGCGGCGATGATCATGCGGCGGGAGAACGTCTCCTCCGTGGTGGTGAAGGACGTGTGCCGGACCGAGGGCAATACGGTGG TGGGCGTGTTCTCCGAGCGCGACGTCACCCGCGCCCTGGTGGAGCACGGCGCAAACACGCCGAGCCTGACGGTCGGCGCC TTCCTGAAGCGTCAGGTCATCTCCTGCGCGCTGACGGACAGCATCGTCACCGTGCTGCGGCTGATGGACGAACATCAGGT GCGCCACCTGCCGGTGATGCAGGAGCATGCGCTCGTGGGCGTGATCAGCGCCACCGATCTCATGCGCCATTACTTGCATG AATCCGAGGTCGCGACTTTCGCTGAACAGGCCCACAGCGGCATGAATGTCGCTCTTGCTGCATTGCGGTAG
Upstream 100 bases:
>100_bases TGGTTCCAATGAAGGAGGTGTCATCCTCCGACGCGGCCTGCCTCAGGCGCTGCGCTTCCTCCGCGGGCTTCCGCGGCGTT CCAGCTGAATGAGGACTGCC
Downstream 100 bases:
>100_bases TTCTCGCGCAGTTGCAGCAAGAAAACGGCTGCAAAACATTTGCAGCCGTTCGGGATGAATGGTACGCTCAAATGTACTTG GTATACGGGATACAATAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: CBS Domain-Containing Protein; Signal-Transduction Protein; Signal Transduction Protein With CBS Domains; Signal Transduction Protein; CBS Domain Containing Protein; CBS Domain-Containing Signal Transduction Protein; XRE Family Transcriptional Regulator; CBS Domain Containing Membrane Protein; CBS Domain Pair Family Protein
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MISVDDILREKRDTRIVTVRMNETIATAAMIMRRENVSSVVVKDVCRTEGNTVVGVFSERDVTRALVEHGANTPSLTVGA FLKRQVISCALTDSIVTVLRLMDEHQVRHLPVMQEHALVGVISATDLMRHYLHESEVATFAEQAHSGMNVALAALR
Sequences:
>Translated_156_residues MISVDDILREKRDTRIVTVRMNETIATAAMIMRRENVSSVVVKDVCRTEGNTVVGVFSERDVTRALVEHGANTPSLTVGA FLKRQVISCALTDSIVTVLRLMDEHQVRHLPVMQEHALVGVISATDLMRHYLHESEVATFAEQAHSGMNVALAALR >Mature_156_residues MISVDDILREKRDTRIVTVRMNETIATAAMIMRRENVSSVVVKDVCRTEGNTVVGVFSERDVTRALVEHGANTPSLTVGA FLKRQVISCALTDSIVTVLRLMDEHQVRHLPVMQEHALVGVISATDLMRHYLHESEVATFAEQAHSGMNVALAALR
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17278; Mature: 17278
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISVDDILREKRDTRIVTVRMNETIATAAMIMRRENVSSVVVKDVCRTEGNTVVGVFSER CCCHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCC DVTRALVEHGANTPSLTVGAFLKRQVISCALTDSIVTVLRLMDEHQVRHLPVMQEHALVG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VISATDLMRHYLHESEVATFAEQAHSGMNVALAALR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECC >Mature Secondary Structure MISVDDILREKRDTRIVTVRMNETIATAAMIMRRENVSSVVVKDVCRTEGNTVVGVFSER CCCHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCC DVTRALVEHGANTPSLTVGAFLKRQVISCALTDSIVTVLRLMDEHQVRHLPVMQEHALVG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VISATDLMRHYLHESEVATFAEQAHSGMNVALAALR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA