| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is oxlT [H]
Identifier: 158425258
GI number: 158425258
Start: 4172256
End: 4173557
Strand: Reverse
Name: oxlT [H]
Synonym: AZC_3634
Alternate gene names: 158425258
Gene position: 4173557-4172256 (Counterclockwise)
Preceding gene: 158425259
Following gene: 158425257
Centisome position: 77.72
GC content: 62.75
Gene sequence:
>1302_bases ATGGTCGCTCAAGCTGGGAGCAGCCCCGCGCCGTCTACGCGCTGGCTGCAGTTGGTGGCCGGCATCGTCTGCATGGTCGC GGCTGCCAACATTCAATATTCTTGGACACTCTTCGTTCCGGAGATCCAGAACGCCCACGGCTGGACGCGTGCGTCCATTC AGGTGGCCTTCACCATCTTCGTCGTGGTGCAGACTTGGCTGACGCCGATCGAGGGCTACTTCATCGACAAGTACGGCCCG CGCGCCGTGGTGTTCGTGGGTGGTCTCTTCACCGGCCTGTCCTGGATCGTCAACTCCTATGCCACCACGCTGACGGGCTT CTACGTGGGCGCGGTCATCGGCGGCATCGGCGTCGGCTGCGTGTATGCCACCTGCGTCAACAGCGCGCTGAAGTGGTTCC CGGACAAGCGCGGTCTTGCGGTCGGTCTCACCGCGGCGGGCTACGGCTCGGGCACGGTTCTGACGATCATGCCGATCGCC AACATGCTCAAGACCTCCGGCTATCAGGACACCTTCTTCCTGTTCGGCCTCATCCAGGGCGCCATCATCCTTCTCGCGGC GGGCTTCCTGCGGCAGCCGGGCTCCGGTGAAGTGGTGTATTCGGCGAGCGTCGCCCAGTCCCGGCGTGACTACACGCTCG GCGAAGCGCTGCGCACTCCGGTCTTCTACGTCATGCTCGGCATGTTCATCTGCACCGTTACCGGCGGTCTGATGGCTGTG GCGCAGCTCGGCGTCATCGCGGAAGACCTCGGTGTGAAGAAGGTGGAAGTGAACCTCTACTTCTTCGCCATGGCCGCCCT GCCGTTCGCGCTGATGCTGGACCGTATCCTCAACGGTATTTCGCGTCCGCTGTTCGGCTGGATCTCCGACCATATCGGCC GTGAGAAGACCATGTTCTTTGCTTTCGCCATGGAAGGCATCGGCATCGTCGCCCTCGGCACGTTCGGTCACAATCCCTGG GCCTTCATCATCCTGTCCGGCGTGGTCTTCCTCGCCTGGGGTGAAGTCTACTCTCTGTTCAGTGCAACCGCGGCCGATAC GTTCGGTTCCAAGCATGTGGGCAAGATCTACGGCGTTCTTTACTGCGCCAAGGGTGTTGCGGCTCTGCTTGTTCCCGTGG CGAACCTGATCATGGAAGCATCGGGCAGCTGGGCGACGGTTCTTTACATCGTCGCGGCCATGGATCTGACCGCTGCCTTT GCCGCGCTTTTCGTTCTGCGTCCGATGCTGGCGCGCCATCACCGGCAGAACGAAGCGGCGGCCCAAGCCCTGCGCGAGCG CGACGGTATCGTCCGCGCTTGA
Upstream 100 bases:
>100_bases CAAGTTCTACGCGTTCGCAACAGCCGCCCAAAGAGGGACAGAGGGTCGGGCGGTCCTCATATCAATAGAAGAAAAATCAT CTTCATCAGGGGTAGGAAAC
Downstream 100 bases:
>100_bases ACAAAGAGCCCTCTGTCGCCCTCGGGCGACCCCTCGCGGCCCCGGCTTTGCCGGGGCCTTTTTTTTTTGTTTTCGCGCGC GATCCGGGCGCTGTTGCCCG
Product: oxalate/formate antiporter
Products: NA
Alternate protein names: OFA; Oxalate:formate antiport protein; Oxalate:formate exchange protein [H]
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MVAQAGSSPAPSTRWLQLVAGIVCMVAAANIQYSWTLFVPEIQNAHGWTRASIQVAFTIFVVVQTWLTPIEGYFIDKYGP RAVVFVGGLFTGLSWIVNSYATTLTGFYVGAVIGGIGVGCVYATCVNSALKWFPDKRGLAVGLTAAGYGSGTVLTIMPIA NMLKTSGYQDTFFLFGLIQGAIILLAAGFLRQPGSGEVVYSASVAQSRRDYTLGEALRTPVFYVMLGMFICTVTGGLMAV AQLGVIAEDLGVKKVEVNLYFFAMAALPFALMLDRILNGISRPLFGWISDHIGREKTMFFAFAMEGIGIVALGTFGHNPW AFIILSGVVFLAWGEVYSLFSATAADTFGSKHVGKIYGVLYCAKGVAALLVPVANLIMEASGSWATVLYIVAAMDLTAAF AALFVLRPMLARHHRQNEAAAQALRERDGIVRA
Sequences:
>Translated_433_residues MVAQAGSSPAPSTRWLQLVAGIVCMVAAANIQYSWTLFVPEIQNAHGWTRASIQVAFTIFVVVQTWLTPIEGYFIDKYGP RAVVFVGGLFTGLSWIVNSYATTLTGFYVGAVIGGIGVGCVYATCVNSALKWFPDKRGLAVGLTAAGYGSGTVLTIMPIA NMLKTSGYQDTFFLFGLIQGAIILLAAGFLRQPGSGEVVYSASVAQSRRDYTLGEALRTPVFYVMLGMFICTVTGGLMAV AQLGVIAEDLGVKKVEVNLYFFAMAALPFALMLDRILNGISRPLFGWISDHIGREKTMFFAFAMEGIGIVALGTFGHNPW AFIILSGVVFLAWGEVYSLFSATAADTFGSKHVGKIYGVLYCAKGVAALLVPVANLIMEASGSWATVLYIVAAMDLTAAF AALFVLRPMLARHHRQNEAAAQALRERDGIVRA >Mature_433_residues MVAQAGSSPAPSTRWLQLVAGIVCMVAAANIQYSWTLFVPEIQNAHGWTRASIQVAFTIFVVVQTWLTPIEGYFIDKYGP RAVVFVGGLFTGLSWIVNSYATTLTGFYVGAVIGGIGVGCVYATCVNSALKWFPDKRGLAVGLTAAGYGSGTVLTIMPIA NMLKTSGYQDTFFLFGLIQGAIILLAAGFLRQPGSGEVVYSASVAQSRRDYTLGEALRTPVFYVMLGMFICTVTGGLMAV AQLGVIAEDLGVKKVEVNLYFFAMAALPFALMLDRILNGISRPLFGWISDHIGREKTMFFAFAMEGIGIVALGTFGHNPW AFIILSGVVFLAWGEVYSLFSATAADTFGSKHVGKIYGVLYCAKGVAALLVPVANLIMEASGSWATVLYIVAAMDLTAAF AALFVLRPMLARHHRQNEAAAQALRERDGIVRA
Specific function: Anion transporter that carries out the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation, at the plasma membrane, and in doing so catalyzes the vectorial portion of a proton-motive metabolic cycle that drives ATP
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. OFA (TC 2.A.1.11) family [H]
Homologues:
Organism=Escherichia coli, GI1789969, Length=363, Percent_Identity=23.6914600550964, Blast_Score=110, Evalue=2e-25, Organism=Caenorhabditis elegans, GI193209150, Length=368, Percent_Identity=22.8260869565217, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46392; Mature: 46392
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS00036 BZIP_BASIC ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAQAGSSPAPSTRWLQLVAGIVCMVAAANIQYSWTLFVPEIQNAHGWTRASIQVAFTIF CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHH VVVQTWLTPIEGYFIDKYGPRAVVFVGGLFTGLSWIVNSYATTLTGFYVGAVIGGIGVGC HHHHHHHHHHCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYATCVNSALKWFPDKRGLAVGLTAAGYGSGTVLTIMPIANMLKTSGYQDTFFLFGLIQG HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHH AIILLAAGFLRQPGSGEVVYSASVAQSRRDYTLGEALRTPVFYVMLGMFICTVTGGLMAV HHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLGVIAEDLGVKKVEVNLYFFAMAALPFALMLDRILNGISRPLFGWISDHIGREKTMFF HHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AFAMEGIGIVALGTFGHNPWAFIILSGVVFLAWGEVYSLFSATAADTFGSKHVGKIYGVL EEHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH YCAKGVAALLVPVANLIMEASGSWATVLYIVAAMDLTAAFAALFVLRPMLARHHRQNEAA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH AQALRERDGIVRA HHHHHHHCCCCCC >Mature Secondary Structure MVAQAGSSPAPSTRWLQLVAGIVCMVAAANIQYSWTLFVPEIQNAHGWTRASIQVAFTIF CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHH VVVQTWLTPIEGYFIDKYGPRAVVFVGGLFTGLSWIVNSYATTLTGFYVGAVIGGIGVGC HHHHHHHHHHCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYATCVNSALKWFPDKRGLAVGLTAAGYGSGTVLTIMPIANMLKTSGYQDTFFLFGLIQG HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHH AIILLAAGFLRQPGSGEVVYSASVAQSRRDYTLGEALRTPVFYVMLGMFICTVTGGLMAV HHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLGVIAEDLGVKKVEVNLYFFAMAALPFALMLDRILNGISRPLFGWISDHIGREKTMFF HHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AFAMEGIGIVALGTFGHNPWAFIILSGVVFLAWGEVYSLFSATAADTFGSKHVGKIYGVL EEHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH YCAKGVAALLVPVANLIMEASGSWATVLYIVAAMDLTAAFAALFVLRPMLARHHRQNEAA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH AQALRERDGIVRA HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8636101; 9651403; 11919184; 11113128; 11274108; 11500368 [H]