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The map label for this gene is sufB [C]

Identifier: 158425239

GI number: 158425239

Start: 4144077

End: 4145459

Strand: Reverse

Name: sufB [C]

Synonym: AZC_3615

Alternate gene names: 158425239

Gene position: 4145459-4144077 (Counterclockwise)

Preceding gene: 158425240

Following gene: 158425238

Centisome position: 77.2

GC content: 62.55

Gene sequence:

>1383_bases
ATGCCAGCAGTCCAGGAGACGGTCGAACGCGTCCGGTCGATCGACGTCGATCAGTACAAGTACGGGTTCGTCACCGATAT
CGAGAGCGAGAAGGCCCCGAAGGGTCTGAACGAGGACACCGTCCGCTACATCTCGGCCAAGAAGAACGAGCCCGAGTGGA
TGCTGGAGTGGCGCCTCGACGCCTTCCGCCGCTGGCTGACCATGGAGGAGCCCACCTGGGCCCGCGTCAGCTACCCCAAG
ATCGATTTCCAGGACTATTATTACTACGCCCAGCCCAAGGCGAAGCCGAAGTCGCTGGACGAGATCGATCCGGAAATCCT
CGCCACCTATGACAAGCTCGGCATCCCGCTGCGCGAGCGCGAGGCGCTGCTCGGCATCGAGAGCGGTTCGCGTCCCATCG
CGGTGGATGCGGTGTTCGACAGCGTGTCGGTGGCCACCACCTTCAAGGCCGAGCTCGCCAAGGCAGGCGTGATCTTCTGC
TCCATCTCGGAAGCCATCCGCGAGCATCCCGATCTGGTGAAGCAGTATCTCGGCTCCGTCGTGCCGGTGTCCGACAATTT
CTATGCGACGCTGAACACGGCGGTCTTCTCGGACGGCTCCTTCGTCTATGTGCCGAAGGGCGTGCGCTGCCCCATGGAGC
TCTCCACCTACTTCCGCATCAATGAGCGGAATACGGGCCAGTTCGAGCGCACCCTCATCATCGCCGATGAAGGTGCCTAT
GTGAGCTATCTCGAAGGCTGCACCGCCCCGCAGCGCGACGAGAACCAGCTCCACGCGGCGGTGGTCGAGCTCGTCGCCCT
CAAGGATGCCGAGATCAAGTATTCCACCGTCCAGAACTGGTATCCCGGCGACAAGGACGGAAAGGGCGGCATCTACAATT
TCGTCACCAAGCGTGGCGACTGCCGCGGCGACAATTCCAAGATCTCGTGGACGCAGGTGGAGACGGGCTCCGCCATCACC
TGGAAGTATCCGAGCTGCATCCTGCGCGGCGACAACAGCCAGGGCGAGTTCTATTCCATCGCCATTTCCAACGGCTTCCA
GCAGGTCGACTCCGGGACCAAGATGATCCACCTCGGCAAGAACACGTCGAGCCGGATCATCTCCAAGGGCATCGCCGCCG
GCCGCTCGGAGAACACCTATCGCGGTCAGGTGACCGCGCACCGCCGGGCCACCGGCGCGCGCAACTTCACCAATTGCGAT
TCGCTCCTCATCGGCGACAAGTGCGGCGCGCACACCGTGCCTTACATCGAGGCCAAGAACGCCTCCGCCGTGTTCGAGCA
CGAGGCGACACCTCCAAGATCTCCGAGGACCAGCTGTTCTATTGTATGCAGCGCGGCCTCTCGCAGGAGGAGGCGGTGGC
GCTCATCGTCAATGGCTTCGTGA

Upstream 100 bases:

>100_bases
CTTGCGCCGCGTCGTTCCGCAGGTGAGAAGCCGCTCGCTGAGAGCGGCGTGAGGAACTTGACCCGCGGGCCTTGACCCCG
CGCGGGAGAGGAGACGGAAG

Downstream 100 bases:

>100_bases
AGGACGTGCTCCAGCAACTGCCCATGGAGTTCGCCGTCGAGGCCCAGAAGCTGATCTCCGTGAGCCTCGAAGGCTCGGTG
GGCTGATTGACCTCACGCCC

Product: FeS assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MPAVQETVERVRSIDVDQYKYGFVTDIESEKAPKGLNEDTVRYISAKKNEPEWMLEWRLDAFRRWLTMEEPTWARVSYPK
IDFQDYYYYAQPKAKPKSLDEIDPEILATYDKLGIPLREREALLGIESGSRPIAVDAVFDSVSVATTFKAELAKAGVIFC
SISEAIREHPDLVKQYLGSVVPVSDNFYATLNTAVFSDGSFVYVPKGVRCPMELSTYFRINERNTGQFERTLIIADEGAY
VSYLEGCTAPQRDENQLHAAVVELVALKDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAIT
WKYPSCILRGDNSQGEFYSIAISNGFQQVDSGTKMIHLGKNTSSRIISKGIAAGRSENTYRGQVTAHRRATGARNFTNCD
SLLIGDKCGAHTVPYIEAKNASAVFEHEATPPRSPRTSCSIVCSAASRRRRRWRSSSMAS

Sequences:

>Translated_460_residues
MPAVQETVERVRSIDVDQYKYGFVTDIESEKAPKGLNEDTVRYISAKKNEPEWMLEWRLDAFRRWLTMEEPTWARVSYPK
IDFQDYYYYAQPKAKPKSLDEIDPEILATYDKLGIPLREREALLGIESGSRPIAVDAVFDSVSVATTFKAELAKAGVIFC
SISEAIREHPDLVKQYLGSVVPVSDNFYATLNTAVFSDGSFVYVPKGVRCPMELSTYFRINERNTGQFERTLIIADEGAY
VSYLEGCTAPQRDENQLHAAVVELVALKDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAIT
WKYPSCILRGDNSQGEFYSIAISNGFQQVDSGTKMIHLGKNTSSRIISKGIAAGRSENTYRGQVTAHRRATGARNFTNCD
SLLIGDKCGAHTVPYIEAKNASAVFEHEATPPRSPRTSCSIVCSAASRRRRRWRSSSMAS
>Mature_459_residues
PAVQETVERVRSIDVDQYKYGFVTDIESEKAPKGLNEDTVRYISAKKNEPEWMLEWRLDAFRRWLTMEEPTWARVSYPKI
DFQDYYYYAQPKAKPKSLDEIDPEILATYDKLGIPLREREALLGIESGSRPIAVDAVFDSVSVATTFKAELAKAGVIFCS
ISEAIREHPDLVKQYLGSVVPVSDNFYATLNTAVFSDGSFVYVPKGVRCPMELSTYFRINERNTGQFERTLIIADEGAYV
SYLEGCTAPQRDENQLHAAVVELVALKDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAITW
KYPSCILRGDNSQGEFYSIAISNGFQQVDSGTKMIHLGKNTSSRIISKGIAAGRSENTYRGQVTAHRRATGARNFTNCDS
LLIGDKCGAHTVPYIEAKNASAVFEHEATPPRSPRTSCSIVCSAASRRRRRWRSSSMAS

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=431, Percent_Identity=60.3248259860789, Blast_Score=557, Evalue=1e-160,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 51500; Mature: 51369

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVQETVERVRSIDVDQYKYGFVTDIESEKAPKGLNEDTVRYISAKKNEPEWMLEWRLD
CCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHEEECCCCCCCEEEHHHHH
AFRRWLTMEEPTWARVSYPKIDFQDYYYYAQPKAKPKSLDEIDPEILATYDKLGIPLRER
HHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCHHCCHHHHHHHHHHCCCHHHC
EALLGIESGSRPIAVDAVFDSVSVATTFKAELAKAGVIFCSISEAIREHPDLVKQYLGSV
HHEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEHHHHHHCCHHHHHHHHCCE
VPVSDNFYATLNTAVFSDGSFVYVPKGVRCPMELSTYFRINERNTGQFERTLIIADEGAY
EECCCCEEEEEEEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCE
VSYLEGCTAPQRDENQLHAAVVELVALKDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGD
EHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCCCCHHHHHHCCCC
CRGDNSKISWTQVETGSAITWKYPSCILRGDNSQGEFYSIAISNGFQQVDSGTKMIHLGK
CCCCCCEEEEEEEECCCEEEEECCEEEEECCCCCCCEEEEEECCCHHHHCCCCEEEEECC
NTSSRIISKGIAAGRSENTYRGQVTAHRRATGARNFTNCDSLLIGDKCGAHTVPYIEAKN
CCHHHHHHHHHHCCCCCCCEECEEEEEHHHCCCCCCCCCCCEEECCCCCCCCCCEEECCC
ASAVFEHEATPPRSPRTSCSIVCSAASRRRRRWRSSSMAS
CCEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PAVQETVERVRSIDVDQYKYGFVTDIESEKAPKGLNEDTVRYISAKKNEPEWMLEWRLD
CCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHEEECCCCCCCEEEHHHHH
AFRRWLTMEEPTWARVSYPKIDFQDYYYYAQPKAKPKSLDEIDPEILATYDKLGIPLRER
HHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCHHCCHHHHHHHHHHCCCHHHC
EALLGIESGSRPIAVDAVFDSVSVATTFKAELAKAGVIFCSISEAIREHPDLVKQYLGSV
HHEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEHHHHHHCCHHHHHHHHCCE
VPVSDNFYATLNTAVFSDGSFVYVPKGVRCPMELSTYFRINERNTGQFERTLIIADEGAY
EECCCCEEEEEEEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCE
VSYLEGCTAPQRDENQLHAAVVELVALKDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGD
EHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCCCCHHHHHHCCCC
CRGDNSKISWTQVETGSAITWKYPSCILRGDNSQGEFYSIAISNGFQQVDSGTKMIHLGK
CCCCCCEEEEEEEECCCEEEEECCEEEEECCCCCCCEEEEEECCCHHHHCCCCEEEEECC
NTSSRIISKGIAAGRSENTYRGQVTAHRRATGARNFTNCDSLLIGDKCGAHTVPYIEAKN
CCHHHHHHHHHHCCCCCCCEECEEEEEHHHCCCCCCCCCCCEEECCCCCCCCCCEEECCC
ASAVFEHEATPPRSPRTSCSIVCSAASRRRRRWRSSSMAS
CCEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]