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The map label for this gene is rtpR [H]

Identifier: 158425213

GI number: 158425213

Start: 4122652

End: 4124646

Strand: Reverse

Name: rtpR [H]

Synonym: AZC_3589

Alternate gene names: 158425213

Gene position: 4124646-4122652 (Counterclockwise)

Preceding gene: 158425214

Following gene: 158425212

Centisome position: 76.81

GC content: 62.81

Gene sequence:

>1995_bases
ATGACGACACCAACAACCCGCGCTGAGGTTATCGCCCGGCGAACCTACAACCGCCCTCTGGACACTCAGGGGGCCACTTT
CGAGACGTGGGGCGAGACTATCGCCCGCGTCATCTCGCACCAGACTTGGCTATGGGAACGGGCCAAGGGAGGCCCGCTGT
CCGCCGAGGAATGCGCCGAGTTGGAGGAACTGCGCGAGCTGATGAACAGCCGCAAGGTTCTTCCCTCGGGCCGCACCCTG
TGGCTGGGCGGAACGGAGATTGCGAAACGCCGTGAGGCTTCGCAGTTCAATTGCTCCTTCGCCCGCATCGAGACGGTCCA
CGACATCGTTGATGCCATGTGGCTCCTGCTTCAGGGCTGCGGTGTCGGCTTCGAGCCGGTGGTGGGGACCCTCAACGGAT
TCTCCCGGCCGGTTCGTGTCGAGGTGGTCCGGTCGGAGAACCGCACCACCAAGGGCCGCGAGGAGAACCTTGAGACCTTC
ACCGAGGAGCATGGCGAAAAGGTCTGGACGATCAGCCTTGGCGACAGCGCCGAGGCATGGGCCAAGGCCGCAGGCAAGCT
CCTTGCGAACAAGCGGCCGGTGGATGTCCTGCGGCTCGACTTCCGCGAAATCCGCGCCCCCGGCATCCGCCTGTCCGGCT
ACGGCTGGATCAGCTCCGGTGACGTCACGATCAGCAAGGCGTTCGTCGCCATTGCGGAAATCCTCAACCGCCGGGCCGGG
CAACTCCTGTCCCGCATCGACATCCTCGACATCGTGAATTGGCTGGGAACGACCCTGTCATCGCGGCGCTCGGCCGAGAT
CGCCGTGGTGCCGTTTGATGATCGGGAGTGGCAGGAGTTCGCCACGGCGAAGAAGGACCACTGGATCGGCAATCCGCAGC
GGGCGCAGTCCAACAACTCGCTCCTGTTCTACCGGAAGCCGGCCAAGAACGAACTGCGTCAGATATTCGACCTGATGCAG
GACGCGGGAGGATCGGAGCCGGGCTTCATCAACGCCGTGGCTGCCCTGAAGCGGGCACCTTGGTTCAAGGGCGTGAACCC
CTGCGCGGAAATCCTCCTCGGCAACAAGTCCTTCTGCAATCTCGTGGAGACGGACCTAGGCGCATTCAACGGGAACCTCG
CCGGCCTCCATCGGGCCATCCGGCTCGTGGCGCGGGCGAACTACCGTCAGACCTGCGTCTCGTTTCTGGATGGCATTCTT
CAGCGCTCTTGGCATGAGCTGAACGAGTTCCTGCGTCTGTGCGGCGTGGGCCTCACCGGCATCGTCCGGTGGGAACATCG
CGACGACGGCGCGGCCTTCCGCGAGTTGCGCCGCATTGCCCATGAGGGCGCGAACGGCATGGCCGACGAGCTGGGCCTTC
CGCGTCCGAAGGTGGTGACCACGGTCAAGCCCTCGGGCACGCTCTCCAAGGTGATGGACACCACCGAAGGCGTTCACAAG
CCGCTCGGCCGGTTCATCTTCAACAACGTCCGGTTCTCGACCCATGACCCGCTGGTGCCGGTTCTGGAACAGGCGGGCTA
TCGGGTTTTTCCCGACCCCTACGCGGGCGATGCCGTGCTGGTGACCTTCCCGGTCGATTATTCGGATGTTGCTTTCGATG
AATGCACGGTCCTCCGTGAGGGGGAGCTTGTGAAAGTCGAGGTGAATACGGAAAGCGCCATCGAACAGCTTGAGCGTTAC
AAGCTCCTGATGGACAATTACGTCGATCACAATTGCTCAATCACGGTCAGCTACAGCCCGGATGAGGTTGAAGACATCAT
CGACTGGATCGACCGCAATTGGGACAGCTACGTCGGCGTCTCGTTCATCTACCGTAACGATCCGACCAAGAACGCGAAGG
ACCTTGGCTATCCCTACCTGCCGCAGGAAGTGGTGACCGAGGAGGTCTTCCGCTCCTACGTCTCGGGCCTGCGTCCCGTG
GACATCAATCAGGGCAACAGCTTTGAGGAACTGTCCGAGGACGGCTGCGCCTCCGGTGCCTGCCCGGTTCGCTAG

Upstream 100 bases:

>100_bases
CTCGGTGCCGATGGCCGTCCGATCCGTCGCGAAGACGGGAAGGTGCTCAAGGGTCCGAACTACCAGCCCCCCAATCTTCT
CGACCTCACTTTCATCGGAG

Downstream 100 bases:

>100_bases
GGACACCTTCCGGGTCCCCGAAGCGTGCAGTCACTGCACCGGCAATTAACCCCCACTTTCAGCCTATAGACAGGAGCCCC
CGGACTAACCCTCCGGGGGA

Product: ribonucleoside triphosphate reductase

Products: NA

Alternate protein names: RTPR [H]

Number of amino acids: Translated: 664; Mature: 663

Protein sequence:

>664_residues
MTTPTTRAEVIARRTYNRPLDTQGATFETWGETIARVISHQTWLWERAKGGPLSAEECAELEELRELMNSRKVLPSGRTL
WLGGTEIAKRREASQFNCSFARIETVHDIVDAMWLLLQGCGVGFEPVVGTLNGFSRPVRVEVVRSENRTTKGREENLETF
TEEHGEKVWTISLGDSAEAWAKAAGKLLANKRPVDVLRLDFREIRAPGIRLSGYGWISSGDVTISKAFVAIAEILNRRAG
QLLSRIDILDIVNWLGTTLSSRRSAEIAVVPFDDREWQEFATAKKDHWIGNPQRAQSNNSLLFYRKPAKNELRQIFDLMQ
DAGGSEPGFINAVAALKRAPWFKGVNPCAEILLGNKSFCNLVETDLGAFNGNLAGLHRAIRLVARANYRQTCVSFLDGIL
QRSWHELNEFLRLCGVGLTGIVRWEHRDDGAAFRELRRIAHEGANGMADELGLPRPKVVTTVKPSGTLSKVMDTTEGVHK
PLGRFIFNNVRFSTHDPLVPVLEQAGYRVFPDPYAGDAVLVTFPVDYSDVAFDECTVLREGELVKVEVNTESAIEQLERY
KLLMDNYVDHNCSITVSYSPDEVEDIIDWIDRNWDSYVGVSFIYRNDPTKNAKDLGYPYLPQEVVTEEVFRSYVSGLRPV
DINQGNSFEELSEDGCASGACPVR

Sequences:

>Translated_664_residues
MTTPTTRAEVIARRTYNRPLDTQGATFETWGETIARVISHQTWLWERAKGGPLSAEECAELEELRELMNSRKVLPSGRTL
WLGGTEIAKRREASQFNCSFARIETVHDIVDAMWLLLQGCGVGFEPVVGTLNGFSRPVRVEVVRSENRTTKGREENLETF
TEEHGEKVWTISLGDSAEAWAKAAGKLLANKRPVDVLRLDFREIRAPGIRLSGYGWISSGDVTISKAFVAIAEILNRRAG
QLLSRIDILDIVNWLGTTLSSRRSAEIAVVPFDDREWQEFATAKKDHWIGNPQRAQSNNSLLFYRKPAKNELRQIFDLMQ
DAGGSEPGFINAVAALKRAPWFKGVNPCAEILLGNKSFCNLVETDLGAFNGNLAGLHRAIRLVARANYRQTCVSFLDGIL
QRSWHELNEFLRLCGVGLTGIVRWEHRDDGAAFRELRRIAHEGANGMADELGLPRPKVVTTVKPSGTLSKVMDTTEGVHK
PLGRFIFNNVRFSTHDPLVPVLEQAGYRVFPDPYAGDAVLVTFPVDYSDVAFDECTVLREGELVKVEVNTESAIEQLERY
KLLMDNYVDHNCSITVSYSPDEVEDIIDWIDRNWDSYVGVSFIYRNDPTKNAKDLGYPYLPQEVVTEEVFRSYVSGLRPV
DINQGNSFEELSEDGCASGACPVR
>Mature_663_residues
TTPTTRAEVIARRTYNRPLDTQGATFETWGETIARVISHQTWLWERAKGGPLSAEECAELEELRELMNSRKVLPSGRTLW
LGGTEIAKRREASQFNCSFARIETVHDIVDAMWLLLQGCGVGFEPVVGTLNGFSRPVRVEVVRSENRTTKGREENLETFT
EEHGEKVWTISLGDSAEAWAKAAGKLLANKRPVDVLRLDFREIRAPGIRLSGYGWISSGDVTISKAFVAIAEILNRRAGQ
LLSRIDILDIVNWLGTTLSSRRSAEIAVVPFDDREWQEFATAKKDHWIGNPQRAQSNNSLLFYRKPAKNELRQIFDLMQD
AGGSEPGFINAVAALKRAPWFKGVNPCAEILLGNKSFCNLVETDLGAFNGNLAGLHRAIRLVARANYRQTCVSFLDGILQ
RSWHELNEFLRLCGVGLTGIVRWEHRDDGAAFRELRRIAHEGANGMADELGLPRPKVVTTVKPSGTLSKVMDTTEGVHKP
LGRFIFNNVRFSTHDPLVPVLEQAGYRVFPDPYAGDAVLVTFPVDYSDVAFDECTVLREGELVKVEVNTESAIEQLERYK
LLMDNYVDHNCSITVSYSPDEVEDIIDWIDRNWDSYVGVSFIYRNDPTKNAKDLGYPYLPQEVVTEEVFRSYVSGLRPVD
INQGNSFEELSEDGCASGACPVR

Specific function: Unknown

COG id: COG1372

COG function: function code L; Intein/homing endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class II ribonucleoside-triphosphate reductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000788
- InterPro:   IPR013345 [H]

Pfam domain/function: PF02867 Ribonuc_red_lgC [H]

EC number: =1.17.4.2 [H]

Molecular weight: Translated: 74449; Mature: 74318

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPTTRAEVIARRTYNRPLDTQGATFETWGETIARVISHQTWLWERAKGGPLSAEECAE
CCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LEELRELMNSRKVLPSGRTLWLGGTEIAKRREASQFNCSFARIETVHDIVDAMWLLLQGC
HHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GVGFEPVVGTLNGFSRPVRVEVVRSENRTTKGREENLETFTEEHGEKVWTISLGDSAEAW
CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHH
AKAAGKLLANKRPVDVLRLDFREIRAPGIRLSGYGWISSGDVTISKAFVAIAEILNRRAG
HHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCEECCCCCHHHHHHHHHHHHHHHHHH
QLLSRIDILDIVNWLGTTLSSRRSAEIAVVPFDDREWQEFATAKKDHWIGNPQRAQSNNS
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHCCCCCC
LLFYRKPAKNELRQIFDLMQDAGGSEPGFINAVAALKRAPWFKGVNPCAEILLGNKSFCN
EEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHH
LVETDLGAFNGNLAGLHRAIRLVARANYRQTCVSFLDGILQRSWHELNEFLRLCGVGLTG
HHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IVRWEHRDDGAAFRELRRIAHEGANGMADELGLPRPKVVTTVKPSGTLSKVMDTTEGVHK
EEEEECCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
PLGRFIFNNVRFSTHDPLVPVLEQAGYRVFPDPYAGDAVLVTFPVDYSDVAFDECTVLRE
HHHHHHHHCCCCCCCCCHHHHHHHCCCEECCCCCCCCEEEEEECCCCCHHCHHHHHEEEC
GELVKVEVNTESAIEQLERYKLLMDNYVDHNCSITVSYSPDEVEDIIDWIDRNWDSYVGV
CCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCE
SFIYRNDPTKNAKDLGYPYLPQEVVTEEVFRSYVSGLRPVDINQGNSFEELSEDGCASGA
EEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHCCCCCCC
CPVR
CCCC
>Mature Secondary Structure 
TTPTTRAEVIARRTYNRPLDTQGATFETWGETIARVISHQTWLWERAKGGPLSAEECAE
CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LEELRELMNSRKVLPSGRTLWLGGTEIAKRREASQFNCSFARIETVHDIVDAMWLLLQGC
HHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GVGFEPVVGTLNGFSRPVRVEVVRSENRTTKGREENLETFTEEHGEKVWTISLGDSAEAW
CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHH
AKAAGKLLANKRPVDVLRLDFREIRAPGIRLSGYGWISSGDVTISKAFVAIAEILNRRAG
HHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCEECCCCCHHHHHHHHHHHHHHHHHH
QLLSRIDILDIVNWLGTTLSSRRSAEIAVVPFDDREWQEFATAKKDHWIGNPQRAQSNNS
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHCCCCCC
LLFYRKPAKNELRQIFDLMQDAGGSEPGFINAVAALKRAPWFKGVNPCAEILLGNKSFCN
EEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHH
LVETDLGAFNGNLAGLHRAIRLVARANYRQTCVSFLDGILQRSWHELNEFLRLCGVGLTG
HHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IVRWEHRDDGAAFRELRRIAHEGANGMADELGLPRPKVVTTVKPSGTLSKVMDTTEGVHK
EEEEECCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
PLGRFIFNNVRFSTHDPLVPVLEQAGYRVFPDPYAGDAVLVTFPVDYSDVAFDECTVLRE
HHHHHHHHCCCCCCCCCHHHHHHHCCCEECCCCCCCCEEEEEECCCCCHHCHHHHHEEEC
GELVKVEVNTESAIEQLERYKLLMDNYVDHNCSITVSYSPDEVEDIIDWIDRNWDSYVGV
CCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCE
SFIYRNDPTKNAKDLGYPYLPQEVVTEEVFRSYVSGLRPVDINQGNSFEELSEDGCASGA
EEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHCCCCCCC
CPVR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA