| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425199
Identifier: 158425199
GI number: 158425199
Start: 4103040
End: 4104749
Strand: Reverse
Name: 158425199
Synonym: AZC_3575
Alternate gene names: NA
Gene position: 4104749-4103040 (Counterclockwise)
Preceding gene: 158425200
Following gene: 158425197
Centisome position: 76.44
GC content: 63.1
Gene sequence:
>1710_bases ATGGTCTCGACCAAAGAACACCTCAAATCCTCGACCCGCTTCACCGATCCCGATCCACTGAAGGCTGACTTCCGCAACTT CCTCTATGTGGTGTGGAAGCACCTCGGGTTACCTGACCCGACGCCCATTCAGTACGACATTGCTGTCTATCTACAGCACG GGCCGAAGCGCTCCATCATCGAAGCCTTCCGTGGTGTCGGCAAATCGTGGGTCACCTCGGCCTTCGTGTGCTGGCTCCTC TACTGCAACCCCGACCACAAGATTCTGGTGGTGTCGGCCTCCAAGATCAGGGCCGACGACTTCACCACCTTCACCCTGCG CCTCATCAAGGAGATGCCGGTTCTCCAACACCTGATCCCGAAGCCGGATCAGCGCGAGAGCAAGGTGGCCTTTGACGTCG GCCCGGCCAAGGCGTCGCACTCCCCGAGCGTCAAGAGCGTGGGCATCACCGGCCAGCTTGCCGGCTCCCGCGCGGACACG ATCATCGCGGACGACGTTGAGATCCCCAACAACTCGCAGACGCAGGCGATGCGCGACAAGCTCTCCGAGCTGGTGAAGGA GTTCGACGCCATTCTGAAGCCCGGCGGCCGGATCATCTATCTCGGCACCCCGCAGACGGAACAGAGCCTCTACAACGAGC TTCCGAACCGTGGCTATCAGGTCCGCATCTGGCCTGCCCGCATCCCCGACGAGAAGCAGCGGGCCATCTATGGGGAGCGC CTTGCGCCCTATATCGACGACCTGATTGCAAAGGGCTGGAAGGCCGGGGCCTCCACGGACCCCAAGCGCTTCTCCGAAGA GGACCTGTGGGAGCGTGAGGCGAGTTACGGCAGGGCCGGCTTCTCCCTGCAATTCATGCTCGACACCCGTCTGTCCGACG CTGACCGCTATCCGCTGAAGCTGTCCGACCTGATCGTGATGTCCCTCAATCCCACGCTGGCCCCGCTGAAGGTGGTCTGG GCATCATCCCCCGAGCTGGCCCATAACGAGCTGCCCAACGTGGGATTCGCCGGGGACCGCCTCTATCGCCCCATGTGGGT CGATAAGGACTGGACCGAGTACACCGGCTCGGTGATGGCAATCGACCCCTCGGGCAGGGGCGGGGACGAGACCGGCTTTG CCGTGGTGAAGTTCCTCCACGGGTTCCAGTTCGTGACCGCCGCAGGTGGCCTGCCGGGTGGCTACGATGACGACACCCTT CTCAAGCTGGCACAGACGGCCAAGCTCCACGGGGTGAACCACGTCATCATCGAGGCGAACTTCGGTGACGGCATGTTCAC GAAGCTCATCCAGCCGGTCTTTCACAAGGTCCACCCGTGCAAGATCGAGGAGGTGAAGCACTCCATGCAGAAGGAGCGCC GCATCATCGACACCCTTGAGCCGGTCATGATGCAGCACCGCCTTGTCATCGACCCGCGTGTGATCGAGCAGGACTTCAAG TCCGTGCAGACCTACCCGCCGGAGCGGGCGCAGCACTACATGCTGACGCACCAGCTCACCCGCATCACCCGCGACAGGGG CTCTCTGGTGAAGGACGACCGGCTCGATGCGCTGGCGATTGCCGTGGCCTACTGGTCCGAGCACATGGCCCGTGACGCGG ACAAGGCGAAGGCCGCGCTGCGGGAGCGCCAGCTTCAGGAGGAGTTGGACAAGTTCCTCCACGGGATCGGCGGAAAGGGG AGGGTGCCCAACCTGTGGGTGAGGGTCTGA
Upstream 100 bases:
>100_bases CTAGGAAGCCCATAGAAGCCCGTTCTTGGCCTCGGCAGGGATAGACCTGCCGGGGCTTTTTTTCGTCTCTGCGGGCCTCT CTGGCTATCTGTGACCGCAT
Downstream 100 bases:
>100_bases CAAAAGTGCAGTGAGACTGCACCGGAATTAACCCCCACTTTCAGGGGGGACCCGAAGGGGACCCAACCCCTATACGGTAT CCAAAAGGTACCTACTGGTC
Product: phage-related DNA maturase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MVSTKEHLKSSTRFTDPDPLKADFRNFLYVVWKHLGLPDPTPIQYDIAVYLQHGPKRSIIEAFRGVGKSWVTSAFVCWLL YCNPDHKILVVSASKIRADDFTTFTLRLIKEMPVLQHLIPKPDQRESKVAFDVGPAKASHSPSVKSVGITGQLAGSRADT IIADDVEIPNNSQTQAMRDKLSELVKEFDAILKPGGRIIYLGTPQTEQSLYNELPNRGYQVRIWPARIPDEKQRAIYGER LAPYIDDLIAKGWKAGASTDPKRFSEEDLWEREASYGRAGFSLQFMLDTRLSDADRYPLKLSDLIVMSLNPTLAPLKVVW ASSPELAHNELPNVGFAGDRLYRPMWVDKDWTEYTGSVMAIDPSGRGGDETGFAVVKFLHGFQFVTAAGGLPGGYDDDTL LKLAQTAKLHGVNHVIIEANFGDGMFTKLIQPVFHKVHPCKIEEVKHSMQKERRIIDTLEPVMMQHRLVIDPRVIEQDFK SVQTYPPERAQHYMLTHQLTRITRDRGSLVKDDRLDALAIAVAYWSEHMARDADKAKAALRERQLQEELDKFLHGIGGKG RVPNLWVRV
Sequences:
>Translated_569_residues MVSTKEHLKSSTRFTDPDPLKADFRNFLYVVWKHLGLPDPTPIQYDIAVYLQHGPKRSIIEAFRGVGKSWVTSAFVCWLL YCNPDHKILVVSASKIRADDFTTFTLRLIKEMPVLQHLIPKPDQRESKVAFDVGPAKASHSPSVKSVGITGQLAGSRADT IIADDVEIPNNSQTQAMRDKLSELVKEFDAILKPGGRIIYLGTPQTEQSLYNELPNRGYQVRIWPARIPDEKQRAIYGER LAPYIDDLIAKGWKAGASTDPKRFSEEDLWEREASYGRAGFSLQFMLDTRLSDADRYPLKLSDLIVMSLNPTLAPLKVVW ASSPELAHNELPNVGFAGDRLYRPMWVDKDWTEYTGSVMAIDPSGRGGDETGFAVVKFLHGFQFVTAAGGLPGGYDDDTL LKLAQTAKLHGVNHVIIEANFGDGMFTKLIQPVFHKVHPCKIEEVKHSMQKERRIIDTLEPVMMQHRLVIDPRVIEQDFK SVQTYPPERAQHYMLTHQLTRITRDRGSLVKDDRLDALAIAVAYWSEHMARDADKAKAALRERQLQEELDKFLHGIGGKG RVPNLWVRV >Mature_569_residues MVSTKEHLKSSTRFTDPDPLKADFRNFLYVVWKHLGLPDPTPIQYDIAVYLQHGPKRSIIEAFRGVGKSWVTSAFVCWLL YCNPDHKILVVSASKIRADDFTTFTLRLIKEMPVLQHLIPKPDQRESKVAFDVGPAKASHSPSVKSVGITGQLAGSRADT IIADDVEIPNNSQTQAMRDKLSELVKEFDAILKPGGRIIYLGTPQTEQSLYNELPNRGYQVRIWPARIPDEKQRAIYGER LAPYIDDLIAKGWKAGASTDPKRFSEEDLWEREASYGRAGFSLQFMLDTRLSDADRYPLKLSDLIVMSLNPTLAPLKVVW ASSPELAHNELPNVGFAGDRLYRPMWVDKDWTEYTGSVMAIDPSGRGGDETGFAVVKFLHGFQFVTAAGGLPGGYDDDTL LKLAQTAKLHGVNHVIIEANFGDGMFTKLIQPVFHKVHPCKIEEVKHSMQKERRIIDTLEPVMMQHRLVIDPRVIEQDFK SVQTYPPERAQHYMLTHQLTRITRDRGSLVKDDRLDALAIAVAYWSEHMARDADKAKAALRERQLQEELDKFLHGIGGKG RVPNLWVRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64287; Mature: 64287
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTKEHLKSSTRFTDPDPLKADFRNFLYVVWKHLGLPDPTPIQYDIAVYLQHGPKRSII CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHHH EAFRGVGKSWVTSAFVCWLLYCNPDHKILVVSASKIRADDFTTFTLRLIKEMPVLQHLIP HHHHCCCHHHHHHHHHHHEEEECCCCEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHCC KPDQRESKVAFDVGPAKASHSPSVKSVGITGQLAGSRADTIIADDVEIPNNSQTQAMRDK CCCCCCCCEEEECCCCCCCCCCCCEEECCEEEECCCCCCEEEECCCCCCCCCHHHHHHHH LSELVKEFDAILKPGGRIIYLGTPQTEQSLYNELPNRGYQVRIWPARIPDEKQRAIYGER HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHH LAPYIDDLIAKGWKAGASTDPKRFSEEDLWEREASYGRAGFSLQFMLDTRLSDADRYPLK HHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEE LSDLIVMSLNPTLAPLKVVWASSPELAHNELPNVGFAGDRLYRPMWVDKDWTEYTGSVMA EEEEEEEECCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCEECCCCHHHHCCEEEE IDPSGRGGDETGFAVVKFLHGFQFVTAAGGLPGGYDDDTLLKLAQTAKLHGVNHVIIEAN ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEE FGDGMFTKLIQPVFHKVHPCKIEEVKHSMQKERRIIDTLEPVMMQHRLVIDPRVIEQDFK CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SVQTYPPERAQHYMLTHQLTRITRDRGSLVKDDRLDALAIAVAYWSEHMARDADKAKAAL HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH RERQLQEELDKFLHGIGGKGRVPNLWVRV HHHHHHHHHHHHHHCCCCCCCCCCEEEEC >Mature Secondary Structure MVSTKEHLKSSTRFTDPDPLKADFRNFLYVVWKHLGLPDPTPIQYDIAVYLQHGPKRSII CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHHH EAFRGVGKSWVTSAFVCWLLYCNPDHKILVVSASKIRADDFTTFTLRLIKEMPVLQHLIP HHHHCCCHHHHHHHHHHHEEEECCCCEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHCC KPDQRESKVAFDVGPAKASHSPSVKSVGITGQLAGSRADTIIADDVEIPNNSQTQAMRDK CCCCCCCCEEEECCCCCCCCCCCCEEECCEEEECCCCCCEEEECCCCCCCCCHHHHHHHH LSELVKEFDAILKPGGRIIYLGTPQTEQSLYNELPNRGYQVRIWPARIPDEKQRAIYGER HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHH LAPYIDDLIAKGWKAGASTDPKRFSEEDLWEREASYGRAGFSLQFMLDTRLSDADRYPLK HHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEE LSDLIVMSLNPTLAPLKVVWASSPELAHNELPNVGFAGDRLYRPMWVDKDWTEYTGSVMA EEEEEEEECCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCEECCCCHHHHCCEEEE IDPSGRGGDETGFAVVKFLHGFQFVTAAGGLPGGYDDDTLLKLAQTAKLHGVNHVIIEAN ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEE FGDGMFTKLIQPVFHKVHPCKIEEVKHSMQKERRIIDTLEPVMMQHRLVIDPRVIEQDFK CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SVQTYPPERAQHYMLTHQLTRITRDRGSLVKDDRLDALAIAVAYWSEHMARDADKAKAAL HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH RERQLQEELDKFLHGIGGKGRVPNLWVRV HHHHHHHHHHHHHHCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA