| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is pheP [C]
Identifier: 158425191
GI number: 158425191
Start: 4094044
End: 4095600
Strand: Direct
Name: pheP [C]
Synonym: AZC_3567
Alternate gene names: 158425191
Gene position: 4094044-4095600 (Clockwise)
Preceding gene: 158425189
Following gene: 158425193
Centisome position: 76.24
GC content: 65.57
Gene sequence:
>1557_bases GTGCTCTTTCATTGCGGCGGCCGGTACGAATGGAGACCTGCCATGAGCGACAGTAGCCTGTCCAAATCGTCATCCGGCAT CAGCTACACCACGGTCGACACCGCCTATTTCGAGCAGCGCAAGCTGAAGCGCCACGCCCGTGTCTGGTCCCTCTGGGCGC TGGGCGTCGGGGCGGTCATTTCCGGCCATTTCTCCGGCTGGAACCTCGGCATCGCCTCCGGCGGCTGGGGCGGCATGTTC ATCGCCGCCGTCATCATCGCCGTCATGTATCTCGGCCTCACCTTCTCCATCGCCGAAATGTCCGCGGCGCTGCCGCACAC GGGCGCGGCCTATTCCTTCGCCCGCACCACCATGGGTCCGTGGGGCGGCTTCGTCACCGGCCTGTGCGAGAATGTGGAAT ATGTCATCACGCCGGCGGTCGTGGTGTCCTTCATCGGCGCCTATATGGGCTCCATCTTCGGCACACCAACATCATTCCAG CCGGTCTACTGGATTTTCGGCTACATCATCTTCGTCGGGCTGAACGTGGTGGGCGTCGAGCTCTCCTTCCGCGTCACGCT GGTGGTGACGCTGGCGGCCCTGGCCTGCCTCGTCGCCTTCTGGGTCTCGGCGCTGCCGGTGATGGACTTCTCCCGCTGGG CGCTCAACATGGGCGTGGGGCCGGACGGCACGGCGGTGGAGCTGCCGAATGGCGGCGGCCCCTTCCTGCCCTTCGGCATC GGCGGGGCGCTGGCGGCCATGCCGTTCGCCGTGTGGCTGTTCCTCGCCATCGAGCAACTGCCGCTGGCGGCCGAGGAATC GGTTGATCCCAAGACCGACATGCCGCGCGGCATTATCGCCGGCATGGCAACGCTCATCGTCTCGGCCTTCATGATCCTGT GGCTCAATTCGTCCGTTGCCAAAGGCGCCTTCGGCCTCTCCACGTCCACCGAGCCTCTGCTCGACGGCTTCAAGGCCATC TATGGCACCGGCATCGCGCAACTGCTGGCGCTGGTGGCGGTGATCGGCCTCATCGCCTCCTTCCACACCATCATCTATGC GCAGGGCCGGCAGATCTATTCGCTCTCCCGGGCCGGCTACTTCCCGCGCGGCCTGTCCGTCACCCACGGCTCGCGCAAGA CCCCGCACGTGGCGATGGCGGCGGGCGCCGTCGTCGGCCTCGCCATCATGCTGGTGATCTGGTTCTCACTGGGCGCGGAT GCCGGCTCTGCGGCCATTGGCGGCACGCTGCTCAACATGGCGGTGTTCGGCGCCATGCTCTCTTACGTGATGCAGGCCAT CTCCTTCATCCGCATGCGGAAGAACATGCCCCATGTGGAGCGGCCCTACACGAGCCCCTTCGGCATTCCGGGCGCAGTGG CCACCATCCTCATAGCGCTCGTGACCATCTACTTCCAGCTCTCCGACCCGACCTACCGGGCCGGCGTCATCGGCGTCGCC ATCTGGTTCGCCATCGGCATCGCCTATTTCGCCCTGCACGGACGGCACAAGCTGGTGCTCTCGCCGGAGGAGGAGTTCGC CCTCTCCGGCGGCACCTCGGAATACAAGAGCTATTGA
Upstream 100 bases:
>100_bases CCGTCATGACAGTTTCACGACAACACACGTTCCATCGGGCATGGAACTTGCCTGAGATCTTCTGCCTCCCCGCCAGGAGT GCCGTCGCCTCCGGCGCGCG
Downstream 100 bases:
>100_bases CTTTCAAAACAACTGCCTCGGCCCAGCCACCGCGCTGGGCCGAGCGCGCCGGCAGGGATCAGACAGGCACGCTCACACCG GCTCGACCGACACCACGCGG
Product: amino acid transporter
Products: Proton [Cytoplasm]; L-phenylalanine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MLFHCGGRYEWRPAMSDSSLSKSSSGISYTTVDTAYFEQRKLKRHARVWSLWALGVGAVISGHFSGWNLGIASGGWGGMF IAAVIIAVMYLGLTFSIAEMSAALPHTGAAYSFARTTMGPWGGFVTGLCENVEYVITPAVVVSFIGAYMGSIFGTPTSFQ PVYWIFGYIIFVGLNVVGVELSFRVTLVVTLAALACLVAFWVSALPVMDFSRWALNMGVGPDGTAVELPNGGGPFLPFGI GGALAAMPFAVWLFLAIEQLPLAAEESVDPKTDMPRGIIAGMATLIVSAFMILWLNSSVAKGAFGLSTSTEPLLDGFKAI YGTGIAQLLALVAVIGLIASFHTIIYAQGRQIYSLSRAGYFPRGLSVTHGSRKTPHVAMAAGAVVGLAIMLVIWFSLGAD AGSAAIGGTLLNMAVFGAMLSYVMQAISFIRMRKNMPHVERPYTSPFGIPGAVATILIALVTIYFQLSDPTYRAGVIGVA IWFAIGIAYFALHGRHKLVLSPEEEFALSGGTSEYKSY
Sequences:
>Translated_518_residues MLFHCGGRYEWRPAMSDSSLSKSSSGISYTTVDTAYFEQRKLKRHARVWSLWALGVGAVISGHFSGWNLGIASGGWGGMF IAAVIIAVMYLGLTFSIAEMSAALPHTGAAYSFARTTMGPWGGFVTGLCENVEYVITPAVVVSFIGAYMGSIFGTPTSFQ PVYWIFGYIIFVGLNVVGVELSFRVTLVVTLAALACLVAFWVSALPVMDFSRWALNMGVGPDGTAVELPNGGGPFLPFGI GGALAAMPFAVWLFLAIEQLPLAAEESVDPKTDMPRGIIAGMATLIVSAFMILWLNSSVAKGAFGLSTSTEPLLDGFKAI YGTGIAQLLALVAVIGLIASFHTIIYAQGRQIYSLSRAGYFPRGLSVTHGSRKTPHVAMAAGAVVGLAIMLVIWFSLGAD AGSAAIGGTLLNMAVFGAMLSYVMQAISFIRMRKNMPHVERPYTSPFGIPGAVATILIALVTIYFQLSDPTYRAGVIGVA IWFAIGIAYFALHGRHKLVLSPEEEFALSGGTSEYKSY >Mature_518_residues MLFHCGGRYEWRPAMSDSSLSKSSSGISYTTVDTAYFEQRKLKRHARVWSLWALGVGAVISGHFSGWNLGIASGGWGGMF IAAVIIAVMYLGLTFSIAEMSAALPHTGAAYSFARTTMGPWGGFVTGLCENVEYVITPAVVVSFIGAYMGSIFGTPTSFQ PVYWIFGYIIFVGLNVVGVELSFRVTLVVTLAALACLVAFWVSALPVMDFSRWALNMGVGPDGTAVELPNGGGPFLPFGI GGALAAMPFAVWLFLAIEQLPLAAEESVDPKTDMPRGIIAGMATLIVSAFMILWLNSSVAKGAFGLSTSTEPLLDGFKAI YGTGIAQLLALVAVIGLIASFHTIIYAQGRQIYSLSRAGYFPRGLSVTHGSRKTPHVAMAAGAVVGLAIMLVIWFSLGAD AGSAAIGGTLLNMAVFGAMLSYVMQAISFIRMRKNMPHVERPYTSPFGIPGAVATILIALVTIYFQLSDPTYRAGVIGVA IWFAIGIAYFALHGRHKLVLSPEEEFALSGGTSEYKSY
Specific function: Probable amino-acid or metabolite transport protein [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786789, Length=434, Percent_Identity=23.0414746543779, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1786302, Length=410, Percent_Identity=21.9512195121951, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1789017, Length=412, Percent_Identity=25.2427184466019, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1790653, Length=478, Percent_Identity=23.4309623430962, Blast_Score=62, Evalue=9e-11, Organism=Drosophila melanogaster, GI221512776, Length=423, Percent_Identity=25.7683215130024, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI24666159, Length=423, Percent_Identity=25.7683215130024, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24668806, Length=426, Percent_Identity=21.830985915493, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI21356285, Length=426, Percent_Identity=21.830985915493, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI24668802, Length=426, Percent_Identity=21.830985915493, Blast_Score=76, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 55074; Mature: 55074
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFHCGGRYEWRPAMSDSSLSKSSSGISYTTVDTAYFEQRKLKRHARVWSLWALGVGAVI CEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGHFSGWNLGIASGGWGGMFIAAVIIAVMYLGLTFSIAEMSAALPHTGAAYSFARTTMGP HCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC WGGFVTGLCENVEYVITPAVVVSFIGAYMGSIFGTPTSFQPVYWIFGYIIFVGLNVVGVE CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEE LSFRVTLVVTLAALACLVAFWVSALPVMDFSRWALNMGVGPDGTAVELPNGGGPFLPFGI EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC GGALAAMPFAVWLFLAIEQLPLAAEESVDPKTDMPRGIIAGMATLIVSAFMILWLNSSVA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH KGAFGLSTSTEPLLDGFKAIYGTGIAQLLALVAVIGLIASFHTIIYAQGRQIYSLSRAGY CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCC FPRGLSVTHGSRKTPHVAMAAGAVVGLAIMLVIWFSLGADAGSAAIGGTLLNMAVFGAML CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SYVMQAISFIRMRKNMPHVERPYTSPFGIPGAVATILIALVTIYFQLSDPTYRAGVIGVA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHH IWFAIGIAYFALHGRHKLVLSPEEEFALSGGTSEYKSY HHHHHHHHHHHHCCCCEEEECCCHHHEECCCCHHHCCC >Mature Secondary Structure MLFHCGGRYEWRPAMSDSSLSKSSSGISYTTVDTAYFEQRKLKRHARVWSLWALGVGAVI CEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGHFSGWNLGIASGGWGGMFIAAVIIAVMYLGLTFSIAEMSAALPHTGAAYSFARTTMGP HCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC WGGFVTGLCENVEYVITPAVVVSFIGAYMGSIFGTPTSFQPVYWIFGYIIFVGLNVVGVE CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEE LSFRVTLVVTLAALACLVAFWVSALPVMDFSRWALNMGVGPDGTAVELPNGGGPFLPFGI EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC GGALAAMPFAVWLFLAIEQLPLAAEESVDPKTDMPRGIIAGMATLIVSAFMILWLNSSVA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH KGAFGLSTSTEPLLDGFKAIYGTGIAQLLALVAVIGLIASFHTIIYAQGRQIYSLSRAGY CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCC FPRGLSVTHGSRKTPHVAMAAGAVVGLAIMLVIWFSLGADAGSAAIGGTLLNMAVFGAML CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SYVMQAISFIRMRKNMPHVERPYTSPFGIPGAVATILIALVTIYFQLSDPTYRAGVIGVA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHH IWFAIGIAYFALHGRHKLVLSPEEEFALSGGTSEYKSY HHHHHHHHHHHHCCCCEEEECCCHHHEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-phenylalanine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-phenylalanine [Periplasm] = Proton [Cytoplasm] + L-phenylalanine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]