| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425172
Identifier: 158425172
GI number: 158425172
Start: 4075874
End: 4076944
Strand: Direct
Name: 158425172
Synonym: AZC_3548
Alternate gene names: NA
Gene position: 4075874-4076944 (Clockwise)
Preceding gene: 158425170
Following gene: 158425173
Centisome position: 75.9
GC content: 68.25
Gene sequence:
>1071_bases GTGGCCCTTCAACAGAACAAAGTGCGCGAACAAGGCGCCGGTTCTTCCCCGGGAGGGGATACAGAGGAGGACGTGATGTT CAGGAAGACCGCGCGCGCGGCCTTGGCCGTGCTCATGGGTGCCGCCGCCTTCAGCCTTGCGGCGACCCCGCGGGCGGCCC AGGCGCAGGCCTATCCCGCCCGGCCGATCACCGTGGTGGTGCCCTTCGCGGCCGGCGGCCCGACCGACACGGTGGCCCGG CTCGTCGCCGAATCCATGACCAAGACGCTCGGCCAGCAGGTGATCGTGGAGAATGTGGGCGGCGCCGGCGGCACCCGCGG CGCGGGCCAGGTGGCGAAGGCCGCGCCTGATGGCTACACGCTCCTGCTCCACCACATCGGCCAGGCCACCGCCCCGAGCC TCTATCGCAAGCTGCCGTACAAGGTGACGGACTTCGAGACCGCCGGCCTGATCACCGCCGTGCCGATGACGCTCATCGCC AAGCCCGGCTTCGAGCCCAAGTCCATCGCCGACGTGGTCGCCTATGTGAAGGCGAACAAGGACAAGGTCACCTATGGCAA TGCGGGCGTCGGCTCGGCCTCGCACCTGTGCGGCATGCTCTTCATGTCGGCTGTGGGCACGCAGGTGACGACCGTGCCCT ATCAGGGCACGGGCCCGGCCATGAACGATCTCGTGGGCGGCCAGATCGACCTCATGTGCGACCAGACCACCAACACCACC GGCCAGATCAAGGGCGGCAAGGTGAAGGCCTATGCGGTGACGACCAAGGAGCCGGTGAAGTCCCTGCCCGACCTGCCCAC CATGGAAGCCGGCGGCCTCAAGGGCTTCGAAGTGACGGTGTGGCACGGCCTCTATGCGCCCAAGGGCACGCCGGCCGACG TGGTGGCCAAGCTCAACGCCGCCCTCAACACCGCGCTGGAAGACCCCAAGGTGGTGGCCCGCTTCGCCGATCTCGGCACC GAGCCGGAGCCGAAGGACCGCCGCAGCGCCGAATTCCACAAGACCTTCCTCACCGCGGAAGTCGCCAAGTGGAAGCCGAT CATCGAGGCGGCCGGCGTCTATGCCGATTGA
Upstream 100 bases:
>100_bases GGCGAGGCAGGGGGTACCACCATCCGGCAGGGCTGCCACAAGTGGCGGGCGGCGAAGCGTGACATTCCCTAGCGAAAGGA TGACTTGACGGAAGGGGCGC
Downstream 100 bases:
>100_bases TTGCCGCCACGGCTGAATCTCCCGCCCGCCGGCCTCAGGTCCGGCGGGCGGCTTCTTCTTGAGGAGGGAATCGGCTGAGC CACCCCTCCCATCCATCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MALQQNKVREQGAGSSPGGDTEEDVMFRKTARAALAVLMGAAAFSLAATPRAAQAQAYPARPITVVVPFAAGGPTDTVAR LVAESMTKTLGQQVIVENVGGAGGTRGAGQVAKAAPDGYTLLLHHIGQATAPSLYRKLPYKVTDFETAGLITAVPMTLIA KPGFEPKSIADVVAYVKANKDKVTYGNAGVGSASHLCGMLFMSAVGTQVTTVPYQGTGPAMNDLVGGQIDLMCDQTTNTT GQIKGGKVKAYAVTTKEPVKSLPDLPTMEAGGLKGFEVTVWHGLYAPKGTPADVVAKLNAALNTALEDPKVVARFADLGT EPEPKDRRSAEFHKTFLTAEVAKWKPIIEAAGVYAD
Sequences:
>Translated_356_residues MALQQNKVREQGAGSSPGGDTEEDVMFRKTARAALAVLMGAAAFSLAATPRAAQAQAYPARPITVVVPFAAGGPTDTVAR LVAESMTKTLGQQVIVENVGGAGGTRGAGQVAKAAPDGYTLLLHHIGQATAPSLYRKLPYKVTDFETAGLITAVPMTLIA KPGFEPKSIADVVAYVKANKDKVTYGNAGVGSASHLCGMLFMSAVGTQVTTVPYQGTGPAMNDLVGGQIDLMCDQTTNTT GQIKGGKVKAYAVTTKEPVKSLPDLPTMEAGGLKGFEVTVWHGLYAPKGTPADVVAKLNAALNTALEDPKVVARFADLGT EPEPKDRRSAEFHKTFLTAEVAKWKPIIEAAGVYAD >Mature_355_residues ALQQNKVREQGAGSSPGGDTEEDVMFRKTARAALAVLMGAAAFSLAATPRAAQAQAYPARPITVVVPFAAGGPTDTVARL VAESMTKTLGQQVIVENVGGAGGTRGAGQVAKAAPDGYTLLLHHIGQATAPSLYRKLPYKVTDFETAGLITAVPMTLIAK PGFEPKSIADVVAYVKANKDKVTYGNAGVGSASHLCGMLFMSAVGTQVTTVPYQGTGPAMNDLVGGQIDLMCDQTTNTTG QIKGGKVKAYAVTTKEPVKSLPDLPTMEAGGLKGFEVTVWHGLYAPKGTPADVVAKLNAALNTALEDPKVVARFADLGTE PEPKDRRSAEFHKTFLTAEVAKWKPIIEAAGVYAD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 37028; Mature: 36897
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQQNKVREQGAGSSPGGDTEEDVMFRKTARAALAVLMGAAAFSLAATPRAAQAQAYPA CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC RPITVVVPFAAGGPTDTVARLVAESMTKTLGQQVIVENVGGAGGTRGAGQVAKAAPDGYT CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHH LLLHHIGQATAPSLYRKLPYKVTDFETAGLITAVPMTLIAKPGFEPKSIADVVAYVKANK HHHHHHCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC DKVTYGNAGVGSASHLCGMLFMSAVGTQVTTVPYQGTGPAMNDLVGGQIDLMCDQTTNTT CEEEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHCCCEEEEEECCCCCCC GQIKGGKVKAYAVTTKEPVKSLPDLPTMEAGGLKGFEVTVWHGLYAPKGTPADVVAKLNA CEECCCEEEEEEECCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHH ALNTALEDPKVVARFADLGTEPEPKDRRSAEFHKTFLTAEVAKWKPIIEAAGVYAD HHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ALQQNKVREQGAGSSPGGDTEEDVMFRKTARAALAVLMGAAAFSLAATPRAAQAQAYPA CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC RPITVVVPFAAGGPTDTVARLVAESMTKTLGQQVIVENVGGAGGTRGAGQVAKAAPDGYT CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHH LLLHHIGQATAPSLYRKLPYKVTDFETAGLITAVPMTLIAKPGFEPKSIADVVAYVKANK HHHHHHCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC DKVTYGNAGVGSASHLCGMLFMSAVGTQVTTVPYQGTGPAMNDLVGGQIDLMCDQTTNTT CEEEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHCCCEEEEEECCCCCCC GQIKGGKVKAYAVTTKEPVKSLPDLPTMEAGGLKGFEVTVWHGLYAPKGTPADVVAKLNA CEECCCEEEEEEECCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHH ALNTALEDPKVVARFADLGTEPEPKDRRSAEFHKTFLTAEVAKWKPIIEAAGVYAD HHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]