| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158425170
Identifier: 158425170
GI number: 158425170
Start: 4072525
End: 4073616
Strand: Direct
Name: 158425170
Synonym: AZC_3546
Alternate gene names: NA
Gene position: 4072525-4073616 (Clockwise)
Preceding gene: 158425169
Following gene: 158425172
Centisome position: 75.84
GC content: 70.88
Gene sequence:
>1092_bases ATGCACCGCACCGGTGTTCTGCTCGCGCTCCTCTCCGCTGTGCTGTTCGGCGCCAGCACGCCGCTCGCCAAGCTGCTGCT GGGCGCGGTGGACCCGTGGATGATGGCGGGCCTGCTCTATCTCGGCGCGGGTTTAGGGCTCGGCCTCATGAAAGCGGGCC ACAGGCTGGCCGGACAGCCCGCCAGCGAAGCGCCGCTGCAACGGGCGGACCTGCCGTGGCTGGCGCTGGTTATTCTCGCC GGCGGCGTGCTCGGGCCGCTGCTGCTCATGCTGGGCCTCAGCCGCACGGATGCCGCCAGCGCCTCGCTGCTGCTCAATCT GGAGAGCCTCGCCACCCTCGCCATCGCCTGGGTGGCCTTCCATGAAAATGTGGACCGCCGGCTTCTGGTAGGTGCCGGCG CCATCCTCGCGGGCGCGCTGGTTCTGTCCTGGCAGGGCGGTGGACAATGGGGATGGGGCGCGCCGCTCATCGCGGGCGCG TGCCTGTGCTGGGGTATCGACAACAATCTCACCCGCAAGCTTTCCGCCGCCGATCCGGTGCAGATCGCCTTGCTGAAGGG GGTGGTGGCGGGGAGCGTGAACCTCGGGCTGGCCCTGGCTTCGGGCGCGCCCTTGCCCGCGCCGGCCCTTCTCGCGGCGG TGCTGGCGGTCGGCTTCCTCGGCTATGGCGTCAGTCTGGTTCTTTTCGTGCTCGGCCTGCGCCATCTCGGGGCCGCACGG ACTGGCGCCTATTTCGCGCTGGCACCCTTCGTCGGCGCACTTCTGGCGGTGGGGCTGCTCGGCGAGCCGCTCACCGTGCG GCTGCTGCTGGCGGGGGGACTCATGGCCATCGGGCTCTGGCTGCACCTGACAGAACAGCATGAGCACGAGCACGACCACC TGCCCCTCGCCCATGCCCATCGCCACCGGCACGACGCGCACCACCAGCACGCCCACGGCCCCGATGACGCGCCCGGCGAA CCGCACAGCCACTGGCATGTGCATACACCGCTGCGGCACCGCCATCCCCATTACCCGGACCTGCACCACCGCCACCGGCA CGACGGCGCGGCCGCTGAAGCCGACGAACCGCCCGCGCATCCGCACGGCTGA
Upstream 100 bases:
>100_bases GAGCGTGAACGCGCAGGCCGCCGCCAGCTGAGCGGTGCCCGACACGACACATCCGAAGCCCTCGCCCTCCGGCGGGGGCT TTTTTGTCTGAGGACGGTCC
Downstream 100 bases:
>100_bases GACCGGCCCCGCCCACCAGACATAAGAAAGGCCGGTGCTCGCCGGCCTTTCTCGGGAGTATCGCCGCTTATTGCGGCGGC TTGGTATCCGGGGGCGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MHRTGVLLALLSAVLFGASTPLAKLLLGAVDPWMMAGLLYLGAGLGLGLMKAGHRLAGQPASEAPLQRADLPWLALVILA GGVLGPLLLMLGLSRTDAASASLLLNLESLATLAIAWVAFHENVDRRLLVGAGAILAGALVLSWQGGGQWGWGAPLIAGA CLCWGIDNNLTRKLSAADPVQIALLKGVVAGSVNLGLALASGAPLPAPALLAAVLAVGFLGYGVSLVLFVLGLRHLGAAR TGAYFALAPFVGALLAVGLLGEPLTVRLLLAGGLMAIGLWLHLTEQHEHEHDHLPLAHAHRHRHDAHHQHAHGPDDAPGE PHSHWHVHTPLRHRHPHYPDLHHRHRHDGAAAEADEPPAHPHG
Sequences:
>Translated_363_residues MHRTGVLLALLSAVLFGASTPLAKLLLGAVDPWMMAGLLYLGAGLGLGLMKAGHRLAGQPASEAPLQRADLPWLALVILA GGVLGPLLLMLGLSRTDAASASLLLNLESLATLAIAWVAFHENVDRRLLVGAGAILAGALVLSWQGGGQWGWGAPLIAGA CLCWGIDNNLTRKLSAADPVQIALLKGVVAGSVNLGLALASGAPLPAPALLAAVLAVGFLGYGVSLVLFVLGLRHLGAAR TGAYFALAPFVGALLAVGLLGEPLTVRLLLAGGLMAIGLWLHLTEQHEHEHDHLPLAHAHRHRHDAHHQHAHGPDDAPGE PHSHWHVHTPLRHRHPHYPDLHHRHRHDGAAAEADEPPAHPHG >Mature_363_residues MHRTGVLLALLSAVLFGASTPLAKLLLGAVDPWMMAGLLYLGAGLGLGLMKAGHRLAGQPASEAPLQRADLPWLALVILA GGVLGPLLLMLGLSRTDAASASLLLNLESLATLAIAWVAFHENVDRRLLVGAGAILAGALVLSWQGGGQWGWGAPLIAGA CLCWGIDNNLTRKLSAADPVQIALLKGVVAGSVNLGLALASGAPLPAPALLAAVLAVGFLGYGVSLVLFVLGLRHLGAAR TGAYFALAPFVGALLAVGLLGEPLTVRLLLAGGLMAIGLWLHLTEQHEHEHDHLPLAHAHRHRHDAHHQHAHGPDDAPGE PHSHWHVHTPLRHRHPHYPDLHHRHRHDGAAAEADEPPAHPHG
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 37931; Mature: 37931
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRTGVLLALLSAVLFGASTPLAKLLLGAVDPWMMAGLLYLGAGLGLGLMKAGHRLAGQP CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCC ASEAPLQRADLPWLALVILAGGVLGPLLLMLGLSRTDAASASLLLNLESLATLAIAWVAF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HENVDRRLLVGAGAILAGALVLSWQGGGQWGWGAPLIAGACLCWGIDNNLTRKLSAADPV HHCCCCEEECCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCH QIALLKGVVAGSVNLGLALASGAPLPAPALLAAVLAVGFLGYGVSLVLFVLGLRHLGAAR HHHHHHHHHHCCCHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH TGAYFALAPFVGALLAVGLLGEPLTVRLLLAGGLMAIGLWLHLTEQHEHEHDHLPLAHAH CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RHRHDAHHQHAHGPDDAPGEPHSHWHVHTPLRHRHPHYPDLHHRHRHDGAAAEADEPPAH HHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCC PHG CCC >Mature Secondary Structure MHRTGVLLALLSAVLFGASTPLAKLLLGAVDPWMMAGLLYLGAGLGLGLMKAGHRLAGQP CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCC ASEAPLQRADLPWLALVILAGGVLGPLLLMLGLSRTDAASASLLLNLESLATLAIAWVAF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HENVDRRLLVGAGAILAGALVLSWQGGGQWGWGAPLIAGACLCWGIDNNLTRKLSAADPV HHCCCCEEECCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCH QIALLKGVVAGSVNLGLALASGAPLPAPALLAAVLAVGFLGYGVSLVLFVLGLRHLGAAR HHHHHHHHHHCCCHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH TGAYFALAPFVGALLAVGLLGEPLTVRLLLAGGLMAIGLWLHLTEQHEHEHDHLPLAHAH CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RHRHDAHHQHAHGPDDAPGEPHSHWHVHTPLRHRHPHYPDLHHRHRHDGAAAEADEPPAH HHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCC PHG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]