| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425121
Identifier: 158425121
GI number: 158425121
Start: 4014761
End: 4015174
Strand: Direct
Name: 158425121
Synonym: AZC_3497
Alternate gene names: NA
Gene position: 4014761-4015174 (Clockwise)
Preceding gene: 158425119
Following gene: 158425122
Centisome position: 74.77
GC content: 66.18
Gene sequence:
>414_bases ATGGATCAGGAGAACCGCATGCCCCTCTCCCGCCGCACGTTCGCGCTCGCAAGCCTCTCTCTGCCGCTCGCCGTTGCGGC CGCCCCCGCCTTTGCCGCCGCCTTCCAGCCTTACACGCCCGCGGCCTTCGCGGCGGCGACGAAGGCGGGCGGACCGGTCT TCGTGCATGTCTATGCCCCCTGGTGCCTGCAATGCCGGGCGCAGGAGGGCATCCTTTCCCGGCTGGTGAACGATCCGAAA TACGCCAAGGCGACCTTCCTGCGCGTGGCCTATGACGAGCAGAAGGATGTGGTCGCGAAACTCGGTGTCCCCCGATCCAC CCTCATCGCCTATGACGGCAGCAAGGAAACCGGCCGCATGTCGTGGGGCGTGACCGAGGCGGATGTGGTGAAGGTTCTGG ATTCGGCTTACTGA
Upstream 100 bases:
>100_bases GACCCGACAAAGCCTTCAAGCCCCCGTGAGGGGATGATCCGCCATGCGCGGCGGGCCGTAGCCTGCCTATGACTGGGATG CGGCCCGCAGCCGCGCACCG
Downstream 100 bases:
>100_bases GGCCGCCCGGTGACCTGCCTCCCGCCCCCAAGCCGATGGTCACGGCCCGCCTCCGGCGGCGCCCGCTCTGGGGCGCGTGA GCCATGATCCTCGCCCTGAG
Product: thioredoxin-related precursor
Products: NA
Alternate protein names: Thioredoxin; Thioredoxin Domain-Containing Protein; Thioredoxin Domain Protein
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MDQENRMPLSRRTFALASLSLPLAVAAAPAFAAAFQPYTPAAFAAATKAGGPVFVHVYAPWCLQCRAQEGILSRLVNDPK YAKATFLRVAYDEQKDVVAKLGVPRSTLIAYDGSKETGRMSWGVTEADVVKVLDSAY
Sequences:
>Translated_137_residues MDQENRMPLSRRTFALASLSLPLAVAAAPAFAAAFQPYTPAAFAAATKAGGPVFVHVYAPWCLQCRAQEGILSRLVNDPK YAKATFLRVAYDEQKDVVAKLGVPRSTLIAYDGSKETGRMSWGVTEADVVKVLDSAY >Mature_137_residues MDQENRMPLSRRTFALASLSLPLAVAAAPAFAAAFQPYTPAAFAAATKAGGPVFVHVYAPWCLQCRAQEGILSRLVNDPK YAKATFLRVAYDEQKDVVAKLGVPRSTLIAYDGSKETGRMSWGVTEADVVKVLDSAY
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14784; Mature: 14784
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQENRMPLSRRTFALASLSLPLAVAAAPAFAAAFQPYTPAAFAAATKAGGPVFVHVYAP CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECC WCLQCRAQEGILSRLVNDPKYAKATFLRVAYDEQKDVVAKLGVPRSTLIAYDGSKETGRM HHHHHHHHHHHHHHHHCCCCHHHHEEEEEEECCCHHHHHHCCCCCCEEEEECCCCCCCCE SWGVTEADVVKVLDSAY ECCCCHHHHHHHHHCCC >Mature Secondary Structure MDQENRMPLSRRTFALASLSLPLAVAAAPAFAAAFQPYTPAAFAAATKAGGPVFVHVYAP CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECC WCLQCRAQEGILSRLVNDPKYAKATFLRVAYDEQKDVVAKLGVPRSTLIAYDGSKETGRM HHHHHHHHHHHHHHHHCCCCHHHHEEEEEEECCCHHHHHHCCCCCCEEEEECCCCCCCCE SWGVTEADVVKVLDSAY ECCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA