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The map label for this gene is ydiS [C]

Identifier: 158425119

GI number: 158425119

Start: 4012296

End: 4013966

Strand: Direct

Name: ydiS [C]

Synonym: AZC_3495

Alternate gene names: 158425119

Gene position: 4012296-4013966 (Clockwise)

Preceding gene: 158425117

Following gene: 158425121

Centisome position: 74.72

GC content: 66.73

Gene sequence:

>1671_bases
ATGACCGAGGCGGAGCTGCCGGAACGCGAAGGCATGGACTATGACGTCGTGGTTGTCGGCGCCGGTCCCGCCGGCCTCGC
CACGGCCATCCGCCTGAAGCAGCTCGCCGAGGAAAAAGGCGCCGACATCTCCGTCGTGGTTGTGGAGAAGGGCTCGGAAG
CCGGTGCGCACATCCTCTCGGGCGCGGTCATCGATCCCATCGGCCTCGATCGCCTGCTGCCCGGCTGGCGCGAGGAAAGC
GATGCCCCGCTGGTGACGCAGGTCACCGACGACCGCTTCTACCTCCTCGGCCCCGCCGGTGGCATCCGCCTGCCCAATTT
CGCCATGCCGCCGCTGATGAACAATCACGGCAATTACATCGGCTCGCTGGGCAATGTGGTGCGCTGGCTCGCCCAGAAGG
CGGAAGCCGTGGGGGTCGAGATCTATCCCGGCTTCGCCGCCTCCGAAGTGCTCTATGATGACAATGGCGCCGTACGCGGC
GTCGCCACGGGCGACATGGGCGTCGATCGCGAAGGCCAGCCCAAGGGTGAATTCACGCGCGGCATGGAATTGCGCGGCCG
CTACACGGTCTTCGCCGAGGGCGCGCGCGGCCACCTCACCAAGCGCCTGATCGCCCGCTTCGGGCTCGACGCCGGCCGCG
AGCCGCCGAAGTTCGGCATCGGCCTCAAGGAGCTCTGGAAGGTGGCCCCGGAGAAGCACCAGCCGGGCCTCGTGCAGCAC
GCCTTCGGCTGGCCGCTGGACGGCAAGACCGGCGGCGGCGCCTTCCTCTACCACATGGAAGACTGTCAGGTGATGGTGGG
CTTCGTGGTCCACCTCAACTACCAGAACCCCTATCTCTCGCCCTTCGACGAGTTCCAGCGCTTCAAGACGCACCCCACCT
TCCGCGACACGTTCGAGGGCGGCAAGCGCATCTCCTATGGCGCGCGCGCCATCACCGAGGGCGGCTACCAGAGCGTGCCC
CGCCTCTCCTTCCCCGGCGGCGTGCTGGTGGGCTGCGCCGCAGGCTTCGTGAACGTGCCGCGCATCAAGGGCAGCCACAA
CGCCGTCCTCTCCGGCATGCTGGCGGCCGAGCATCTCTTCGGCCCGCTGGTGGAAGGGCGCGGCTATGACGAGGTGTCGA
GCTACGAGGCTGCCTGGCGGGCCTCGGACGTGGGCCGCGACCTTCACCGGGTGCGCAATGTGAAGCCGCTCTGGTCGCGC
TTCGGCACCTATCTCGGCATTCCGCTTGGCGCGCTGGACATGTGGACCAACACGCTCGGCTTCTCCTTCTTCGGCACCCA
GAAGCACGGCAAGACCGACGCCGCGAGCCTCAAGCCCGCCTCCGAATTCAAGCCCATCGCCTATCCCAAGCCCGATGGCG
TGCTGACCTTCGACAAGCTGTCCTCGGTGTTCATCTCGAACACCAATCACGAGGAAGACCAGCCCGTTCACCTGAAGGTG
CGCGACCTCGACCTGCAGAAGCGCTCGGAACACGACGTCTTCGCCGGCCCGTCCAACCGCTATTGTCCGGCGGGCGTCTA
TGAATGGGTGGAAGAGGCGTCCGGTCCGCGCTTCCAGATCAACGCGCAGAACTGCGTCCACTGCAAGACGTGCGACATCA
AGGACCCGAACCAGAATATCGACTGGACGGCGCCGGAGGGCGGCGGCGGGCCGAACTATCCCAACATGTGA

Upstream 100 bases:

>100_bases
GAACGCAAAGCGAATTGCCATTCGGGAAAGAGCGTGGAACAACTCCAACCTCCGCCGGCGCCACGCCCGCGCCGGCACAT
CATAACAGGGAAACAGAGAG

Downstream 100 bases:

>100_bases
GGCGGTGTTCCGCCTGAAATGATACGGGCGGCCCTGCGGCCGCCCGTTTGCGTTTGGGTTCCGGGCTCAGTGGCCCGAAA
AGCTCATGATGGTGCGCACC

Product: electrotransfer ubiquinone oxidoreductase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 556; Mature: 555

Protein sequence:

>556_residues
MTEAELPEREGMDYDVVVVGAGPAGLATAIRLKQLAEEKGADISVVVVEKGSEAGAHILSGAVIDPIGLDRLLPGWREES
DAPLVTQVTDDRFYLLGPAGGIRLPNFAMPPLMNNHGNYIGSLGNVVRWLAQKAEAVGVEIYPGFAASEVLYDDNGAVRG
VATGDMGVDREGQPKGEFTRGMELRGRYTVFAEGARGHLTKRLIARFGLDAGREPPKFGIGLKELWKVAPEKHQPGLVQH
AFGWPLDGKTGGGAFLYHMEDCQVMVGFVVHLNYQNPYLSPFDEFQRFKTHPTFRDTFEGGKRISYGARAITEGGYQSVP
RLSFPGGVLVGCAAGFVNVPRIKGSHNAVLSGMLAAEHLFGPLVEGRGYDEVSSYEAAWRASDVGRDLHRVRNVKPLWSR
FGTYLGIPLGALDMWTNTLGFSFFGTQKHGKTDAASLKPASEFKPIAYPKPDGVLTFDKLSSVFISNTNHEEDQPVHLKV
RDLDLQKRSEHDVFAGPSNRYCPAGVYEWVEEASGPRFQINAQNCVHCKTCDIKDPNQNIDWTAPEGGGGPNYPNM

Sequences:

>Translated_556_residues
MTEAELPEREGMDYDVVVVGAGPAGLATAIRLKQLAEEKGADISVVVVEKGSEAGAHILSGAVIDPIGLDRLLPGWREES
DAPLVTQVTDDRFYLLGPAGGIRLPNFAMPPLMNNHGNYIGSLGNVVRWLAQKAEAVGVEIYPGFAASEVLYDDNGAVRG
VATGDMGVDREGQPKGEFTRGMELRGRYTVFAEGARGHLTKRLIARFGLDAGREPPKFGIGLKELWKVAPEKHQPGLVQH
AFGWPLDGKTGGGAFLYHMEDCQVMVGFVVHLNYQNPYLSPFDEFQRFKTHPTFRDTFEGGKRISYGARAITEGGYQSVP
RLSFPGGVLVGCAAGFVNVPRIKGSHNAVLSGMLAAEHLFGPLVEGRGYDEVSSYEAAWRASDVGRDLHRVRNVKPLWSR
FGTYLGIPLGALDMWTNTLGFSFFGTQKHGKTDAASLKPASEFKPIAYPKPDGVLTFDKLSSVFISNTNHEEDQPVHLKV
RDLDLQKRSEHDVFAGPSNRYCPAGVYEWVEEASGPRFQINAQNCVHCKTCDIKDPNQNIDWTAPEGGGGPNYPNM
>Mature_555_residues
TEAELPEREGMDYDVVVVGAGPAGLATAIRLKQLAEEKGADISVVVVEKGSEAGAHILSGAVIDPIGLDRLLPGWREESD
APLVTQVTDDRFYLLGPAGGIRLPNFAMPPLMNNHGNYIGSLGNVVRWLAQKAEAVGVEIYPGFAASEVLYDDNGAVRGV
ATGDMGVDREGQPKGEFTRGMELRGRYTVFAEGARGHLTKRLIARFGLDAGREPPKFGIGLKELWKVAPEKHQPGLVQHA
FGWPLDGKTGGGAFLYHMEDCQVMVGFVVHLNYQNPYLSPFDEFQRFKTHPTFRDTFEGGKRISYGARAITEGGYQSVPR
LSFPGGVLVGCAAGFVNVPRIKGSHNAVLSGMLAAEHLFGPLVEGRGYDEVSSYEAAWRASDVGRDLHRVRNVKPLWSRF
GTYLGIPLGALDMWTNTLGFSFFGTQKHGKTDAASLKPASEFKPIAYPKPDGVLTFDKLSSVFISNTNHEEDQPVHLKVR
DLDLQKRSEHDVFAGPSNRYCPAGVYEWVEEASGPRFQINAQNCVHCKTCDIKDPNQNIDWTAPEGGGGPNYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=560, Percent_Identity=52.5, Blast_Score=574, Evalue=1e-164,
Organism=Escherichia coli, GI1787991, Length=332, Percent_Identity=28.0120481927711, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI87082155, Length=384, Percent_Identity=27.6041666666667, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1786227, Length=332, Percent_Identity=25.3012048192771, Blast_Score=84, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI25144720, Length=564, Percent_Identity=50.709219858156, Blast_Score=548, Evalue=1e-156,
Organism=Saccharomyces cerevisiae, GI6324932, Length=587, Percent_Identity=45.8262350936968, Blast_Score=491, Evalue=1e-139,
Organism=Drosophila melanogaster, GI24652256, Length=570, Percent_Identity=55.9649122807018, Blast_Score=612, Evalue=1e-175,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60644; Mature: 60513

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAELPEREGMDYDVVVVGAGPAGLATAIRLKQLAEEKGADISVVVVEKGSEAGAHILS
CCCCCCCHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHC
GAVIDPIGLDRLLPGWREESDAPLVTQVTDDRFYLLGPAGGIRLPNFAMPPLMNNHGNYI
CCEECCCCHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHH
GSLGNVVRWLAQKAEAVGVEIYPGFAASEVLYDDNGAVRGVATGDMGVDREGQPKGEFTR
HHHHHHHHHHHHHHHHCCEEEECCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCHHC
GMELRGRYTVFAEGARGHLTKRLIARFGLDAGREPPKFGIGLKELWKVAPEKHQPGLVQH
CEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHH
AFGWPLDGKTGGGAFLYHMEDCQVMVGFVVHLNYQNPYLSPFDEFQRFKTHPTFRDTFEG
HCCCCCCCCCCCCEEEEEECCHHEEEEEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHCC
GKRISYGARAITEGGYQSVPRLSFPGGVLVGCAAGFVNVPRIKGSHNAVLSGMLAAEHLF
CCEEECCCHHHCCCCCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
GPLVEGRGYDEVSSYEAAWRASDVGRDLHRVRNVKPLWSRFGTYLGIPLGALDMWTNTLG
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHC
FSFFGTQKHGKTDAASLKPASEFKPIAYPKPDGVLTFDKLSSVFISNTNHEEDQPVHLKV
CEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEHHHHHHHEEECCCCCCCCCEEEEE
RDLDLQKRSEHDVFAGPSNRYCPAGVYEWVEEASGPRFQINAQNCVHCKTCDIKDPNQNI
ECCCCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCC
DWTAPEGGGGPNYPNM
CEECCCCCCCCCCCCC
>Mature Secondary Structure 
TEAELPEREGMDYDVVVVGAGPAGLATAIRLKQLAEEKGADISVVVVEKGSEAGAHILS
CCCCCCHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHC
GAVIDPIGLDRLLPGWREESDAPLVTQVTDDRFYLLGPAGGIRLPNFAMPPLMNNHGNYI
CCEECCCCHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHH
GSLGNVVRWLAQKAEAVGVEIYPGFAASEVLYDDNGAVRGVATGDMGVDREGQPKGEFTR
HHHHHHHHHHHHHHHHCCEEEECCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCHHC
GMELRGRYTVFAEGARGHLTKRLIARFGLDAGREPPKFGIGLKELWKVAPEKHQPGLVQH
CEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHH
AFGWPLDGKTGGGAFLYHMEDCQVMVGFVVHLNYQNPYLSPFDEFQRFKTHPTFRDTFEG
HCCCCCCCCCCCCEEEEEECCHHEEEEEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHCC
GKRISYGARAITEGGYQSVPRLSFPGGVLVGCAAGFVNVPRIKGSHNAVLSGMLAAEHLF
CCEEECCCHHHCCCCCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
GPLVEGRGYDEVSSYEAAWRASDVGRDLHRVRNVKPLWSRFGTYLGIPLGALDMWTNTLG
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHC
FSFFGTQKHGKTDAASLKPASEFKPIAYPKPDGVLTFDKLSSVFISNTNHEEDQPVHLKV
CEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEHHHHHHHEEECCCCCCCCCEEEEE
RDLDLQKRSEHDVFAGPSNRYCPAGVYEWVEEASGPRFQINAQNCVHCKTCDIKDPNQNI
ECCCCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCC
DWTAPEGGGGPNYPNM
CEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]