Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is 158425090

Identifier: 158425090

GI number: 158425090

Start: 3981841

End: 3984180

Strand: Direct

Name: 158425090

Synonym: AZC_3466

Alternate gene names: NA

Gene position: 3981841-3984180 (Clockwise)

Preceding gene: 158425080

Following gene: 158425093

Centisome position: 74.15

GC content: 69.1

Gene sequence:

>2340_bases
TTGCCGCAGGCCGCCCTCCGCCCGCGCCAGACAAGCCTCAAGCAAGTGACAGGGCCGACAAGTGCCCACTGGAACCATCC
GGGCGGAACGGCCCGGCGCGCCGTGAGCATGGAGGGGAACATGGGCAAGGGTCAGCGGGCGGCATTCGGCCAGCCCGACG
GCGGACGTCTGAAGTCCGCCAAGGATGCGCTGCGCGCCGGCACCCTGCATCAGGCCGGCGACCACAAGGGCGCCGCCCAG
CTCTATGCCGCCTCTCTGAAGCGCGACCCGAAGAACCCCATCGTCCAGCACATGTATGCGCTGTGCCTGCGCCAGATCGG
CCGCATCCCGGAAGCGGTCGCGGCGCTGCGCATCTCCACCGCGCTCGATCCCCGGAACGTGGAGGCGCTCGCGGACTACG
GCAGCCTGCTGCTCCAGATGGGCGACCGTGCCGCCGCCCGCGAGGCGTTCGAGAAGGCGCTGGCGCTGCGCCCGAACCAC
CCGGTAGCGAAAGCCGGCATCGCCCGCCTCTCGGCCGTGGACGGCTCCCTCGACGACCTGCTGCGCACGGTGGCGGAACA
GCCCGGCAACGGGCAGGCCGCGCTCGCGCTCGGCTGCGCCATCATTTCGAGCGGCGGAGAGCCGGACGACGCGGCCAAGG
TCTGGGTCGAGGCCGTGCAGCGCGGCGCGCTCACGCCCGAGGACATCGGCATCGAGGGCGTGAACGCCTATCGCGGCGGA
CGCGACCGCGAAGCCCTCGCCCTGCTCAAGATCGCCGCCACGCTGAAGCCGACGGTGGCCGCGCTCCACGCCAATCTCGG
CATGATCCTGCTGGAGAAGCGGCGGCACGCCGAGGCCATGGAGGCGCTGGGCGAAGCGCTGAAGGTGGACCCGAACCACG
TGGGCGCGCTGCTGAACCTCGGCAGCGTCTGCCTCGACCGGAAGGCCTATCCCGAGGCCCTCGCCTATCTGAACCGCGTC
CTGAAGATCGAGCCCGACAATGTGGTGGCGCGCCTCGGCGCGGCCAACGCCTCGCGGCAGATCTGCCAGTGGCGCAATGT
GGAGCAGGAAGAAGCGGCCATCGCAAAGCTGCTGGCCCAGAGCGCGACCCGCACCGGCCCCTTCCTTCTCCTGTCCTCGC
ACATGACGCCGAAGGACCACCTGCGCGCCGCCCGCGTATGGGCGCAGGGCGTGCGCGTGGAGCGCGACGACAAGCTGCCG
CCGGCGCCGCCCGCCGATCCGTCCCGGCGCATCCGCATCGGCTATCTGTCCAACGACTATTACAATCACGCCACCACCTT
CCTGGCGGTGGAGATGTTCGAGCGGCACGACCGCGAGAAGTTCGAGATCTTCGCTTATTCGCATAGCCCCGACGACAAGT
CGGACATGCGCCGGCGCGTGGTTTCCGCCTTCGACCATTTCGTGGAAATCGAGCGCATGAGCAATCCGGAGGCGGCGCGC
CGCATCCGGGCGGACGGCATCGACATCCTCGTCGATCTCAAGGGCTACACCCAGGGCGCCAGGTCCGAGATCATGGCCCT
GCGGCCCGCGCCGGTCCAGGTGAACTTCCTCGGCTATCCCGGCAGCATGGGCGCCGACTTCATAGACTATGTGGTGGGCG
ACCGCTTCGTGACCCCGCTGTCCGCCGCGGCCGACTATGACGAGAAGATCGTCCAGCTGCCCCACTGCTACCAGCCCAAC
GACCGGCATCGTCGCATCTCGGAAACCCTGCCGAGCCGCGCGGCCTGCGGGCTGCCGGAGAGCGGCTTCGTCTTCTGCTG
CTTCAACAACACCTACAAGATCACGCCCGCGGTCTTCTCGGTCTGGATGCGGCTGCTGGACGAGGTGCCCGACTCGGTGC
TGTGGCTCTATGAGGCCAATGCGGCGGCGCGCGACAACCTCGCCTATGAGGCCGCGAAGTTCGGCATCGAGCCCGACCGC
ATCATCTTCGCGCCCAATGCCCTGCTGGCGGATCATCTGGCGCGGCATGCGCACGCCGACCTGTTCCTCGACACCCTGCC
CTACAATGCCCACACCACGGCCAGCGATGCGCTCTGGGCCGGTGTGCCGATCGTCACCTGCGCGGGCGAGACCTTCGCGG
CGCGCGTCGCCGCAAGCCTGCTCGACGCCGTGGGCATGCCGGAACTGATCACCACGTCGCTAGCTGACTATGAGGCCCTG
GCGCTGGCGCTCGCCCGCGATCCGGAGCGGCTTGCCGGCCTCAAGGCCCGCCTCGTCGAAGCCCGCGCGACGGCACCCTT
GTTCGATTCCGAGAAATTCACCCGCGATATCGAGGCCGCCTACCAGCGCATGCACGCGCTGCGCAGCGCCGGCAAGGTGC
CGGAACCGATCGTGGTGTGA

Upstream 100 bases:

>100_bases
CGCCGTTCACCCTCTGATCCGTTCTTCCGCCGCTTCCTGCGCCGGTGATGGTCCGTTCATAGCCGAGCGCCCCCCGCGCC
GCCACGATTCGGCGCCCACA

Downstream 100 bases:

>100_bases
GCGGGGACCACTCGTTTCGCGTCGAAAGCCCAAACGAAGAGGGCGTGGTGATCGGAAGATCACCGCGCCCTTTGTGTCTC
CGGACCGCGATACGCCGTTA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; SPINDLY Family O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_1 Repeat-Containing Protein; Methyltransferase Type; TPR Repeat Protein; TPR Domain Protein; FkbM Family Methyltransferase; Tetratricopeptide Repeat-Containing Protein; SPY Protein; Glycosyltransferase TPR Domain Protein; Glycosyl Transferase Family Protein; Tetratricopeptide Repeat Domain Protein; Tpr Repeat-Containing Protein; Porphyrin Biosynthesis Protein; Transferase; Tetratricopeptide Repeat Family Protein; Sulfotransferase; TPR Domain/SEC-C Motif Domain Protein; TPR Repeat; O-Linked N-Acetylglucosamine TransferaNDLY Family; Tetratricopeptide Repeat Protein; O-Linked Acetylglucosamine Transferase; Glycosyltransferase TPR Domain-Containing Protein; Methyltransferase Regulatory Domain; Tetratricopeptide Domain Protein; TPR Repeat Domain-Containing Protein; TPR Repeat-Containing Glycosyl Transferase; O-Linked GLCNAC Transferase; Glycosyl Transferase TPR Repeat Protein

Number of amino acids: Translated: 779; Mature: 778

Protein sequence:

>779_residues
MPQAALRPRQTSLKQVTGPTSAHWNHPGGTARRAVSMEGNMGKGQRAAFGQPDGGRLKSAKDALRAGTLHQAGDHKGAAQ
LYAASLKRDPKNPIVQHMYALCLRQIGRIPEAVAALRISTALDPRNVEALADYGSLLLQMGDRAAAREAFEKALALRPNH
PVAKAGIARLSAVDGSLDDLLRTVAEQPGNGQAALALGCAIISSGGEPDDAAKVWVEAVQRGALTPEDIGIEGVNAYRGG
RDREALALLKIAATLKPTVAALHANLGMILLEKRRHAEAMEALGEALKVDPNHVGALLNLGSVCLDRKAYPEALAYLNRV
LKIEPDNVVARLGAANASRQICQWRNVEQEEAAIAKLLAQSATRTGPFLLLSSHMTPKDHLRAARVWAQGVRVERDDKLP
PAPPADPSRRIRIGYLSNDYYNHATTFLAVEMFERHDREKFEIFAYSHSPDDKSDMRRRVVSAFDHFVEIERMSNPEAAR
RIRADGIDILVDLKGYTQGARSEIMALRPAPVQVNFLGYPGSMGADFIDYVVGDRFVTPLSAAADYDEKIVQLPHCYQPN
DRHRRISETLPSRAACGLPESGFVFCCFNNTYKITPAVFSVWMRLLDEVPDSVLWLYEANAAARDNLAYEAAKFGIEPDR
IIFAPNALLADHLARHAHADLFLDTLPYNAHTTASDALWAGVPIVTCAGETFAARVAASLLDAVGMPELITTSLADYEAL
ALALARDPERLAGLKARLVEARATAPLFDSEKFTRDIEAAYQRMHALRSAGKVPEPIVV

Sequences:

>Translated_779_residues
MPQAALRPRQTSLKQVTGPTSAHWNHPGGTARRAVSMEGNMGKGQRAAFGQPDGGRLKSAKDALRAGTLHQAGDHKGAAQ
LYAASLKRDPKNPIVQHMYALCLRQIGRIPEAVAALRISTALDPRNVEALADYGSLLLQMGDRAAAREAFEKALALRPNH
PVAKAGIARLSAVDGSLDDLLRTVAEQPGNGQAALALGCAIISSGGEPDDAAKVWVEAVQRGALTPEDIGIEGVNAYRGG
RDREALALLKIAATLKPTVAALHANLGMILLEKRRHAEAMEALGEALKVDPNHVGALLNLGSVCLDRKAYPEALAYLNRV
LKIEPDNVVARLGAANASRQICQWRNVEQEEAAIAKLLAQSATRTGPFLLLSSHMTPKDHLRAARVWAQGVRVERDDKLP
PAPPADPSRRIRIGYLSNDYYNHATTFLAVEMFERHDREKFEIFAYSHSPDDKSDMRRRVVSAFDHFVEIERMSNPEAAR
RIRADGIDILVDLKGYTQGARSEIMALRPAPVQVNFLGYPGSMGADFIDYVVGDRFVTPLSAAADYDEKIVQLPHCYQPN
DRHRRISETLPSRAACGLPESGFVFCCFNNTYKITPAVFSVWMRLLDEVPDSVLWLYEANAAARDNLAYEAAKFGIEPDR
IIFAPNALLADHLARHAHADLFLDTLPYNAHTTASDALWAGVPIVTCAGETFAARVAASLLDAVGMPELITTSLADYEAL
ALALARDPERLAGLKARLVEARATAPLFDSEKFTRDIEAAYQRMHALRSAGKVPEPIVV
>Mature_778_residues
PQAALRPRQTSLKQVTGPTSAHWNHPGGTARRAVSMEGNMGKGQRAAFGQPDGGRLKSAKDALRAGTLHQAGDHKGAAQL
YAASLKRDPKNPIVQHMYALCLRQIGRIPEAVAALRISTALDPRNVEALADYGSLLLQMGDRAAAREAFEKALALRPNHP
VAKAGIARLSAVDGSLDDLLRTVAEQPGNGQAALALGCAIISSGGEPDDAAKVWVEAVQRGALTPEDIGIEGVNAYRGGR
DREALALLKIAATLKPTVAALHANLGMILLEKRRHAEAMEALGEALKVDPNHVGALLNLGSVCLDRKAYPEALAYLNRVL
KIEPDNVVARLGAANASRQICQWRNVEQEEAAIAKLLAQSATRTGPFLLLSSHMTPKDHLRAARVWAQGVRVERDDKLPP
APPADPSRRIRIGYLSNDYYNHATTFLAVEMFERHDREKFEIFAYSHSPDDKSDMRRRVVSAFDHFVEIERMSNPEAARR
IRADGIDILVDLKGYTQGARSEIMALRPAPVQVNFLGYPGSMGADFIDYVVGDRFVTPLSAAADYDEKIVQLPHCYQPND
RHRRISETLPSRAACGLPESGFVFCCFNNTYKITPAVFSVWMRLLDEVPDSVLWLYEANAAARDNLAYEAAKFGIEPDRI
IFAPNALLADHLARHAHADLFLDTLPYNAHTTASDALWAGVPIVTCAGETFAARVAASLLDAVGMPELITTSLADYEALA
LALARDPERLAGLKARLVEARATAPLFDSEKFTRDIEAAYQRMHALRSAGKVPEPIVV

Specific function: Unknown

COG id: COG3914

COG function: function code O; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=604, Percent_Identity=27.9801324503311, Blast_Score=216, Evalue=6e-56,
Organism=Homo sapiens, GI32307150, Length=604, Percent_Identity=27.9801324503311, Blast_Score=216, Evalue=7e-56,
Organism=Caenorhabditis elegans, GI115532690, Length=535, Percent_Identity=26.5420560747664, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI115532692, Length=535, Percent_Identity=26.5420560747664, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI17647755, Length=531, Percent_Identity=29.5668549905838, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24585827, Length=531, Percent_Identity=29.5668549905838, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24585829, Length=531, Percent_Identity=29.5668549905838, Blast_Score=206, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84794; Mature: 84662

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQAALRPRQTSLKQVTGPTSAHWNHPGGTARRAVSMEGNMGKGQRAAFGQPDGGRLKSA
CCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCHHH
KDALRAGTLHQAGDHKGAAQLYAASLKRDPKNPIVQHMYALCLRQIGRIPEAVAALRIST
HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ALDPRNVEALADYGSLLLQMGDRAAAREAFEKALALRPNHPVAKAGIARLSAVDGSLDDL
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHH
LRTVAEQPGNGQAALALGCAIISSGGEPDDAAKVWVEAVQRGALTPEDIGIEGVNAYRGG
HHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCHHHCCC
RDREALALLKIAATLKPTVAALHANLGMILLEKRRHAEAMEALGEALKVDPNHVGALLNL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
GSVCLDRKAYPEALAYLNRVLKIEPDNVVARLGAANASRQICQWRNVEQEEAAIAKLLAQ
HHHHHCCCCCHHHHHHHHHHEEECCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHH
SATRTGPFLLLSSHMTPKDHLRAARVWAQGVRVERDDKLPPAPPADPSRRIRIGYLSNDY
HCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
YNHATTFLAVEMFERHDREKFEIFAYSHSPDDKSDMRRRVVSAFDHFVEIERMSNPEAAR
HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RIRADGIDILVDLKGYTQGARSEIMALRPAPVQVNFLGYPGSMGADFIDYVVGDRFVTPL
HHHCCCCEEEEEECCCCCCCHHHEEEECCCCEEEEEECCCCCCCHHHHHHHHCCHHCCCH
SAAADYDEKIVQLPHCYQPNDRHRRISETLPSRAACGLPESGFVFCCFNNTYKITPAVFS
HHHCCHHHHHHCCCCCCCCCHHHHHHHHHCCCHHCCCCCCCCEEEEEECCCEEECHHHHH
VWMRLLDEVPDSVLWLYEANAAARDNLAYEAAKFGIEPDRIIFAPNALLADHLARHAHAD
HHHHHHHHCCCCEEEEEECCCCHHCCHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH
LFLDTLPYNAHTTASDALWAGVPIVTCAGETFAARVAASLLDAVGMPELITTSLADYEAL
HEEECCCCCCCCCCCCHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ALALARDPERLAGLKARLVEARATAPLFDSEKFTRDIEAAYQRMHALRSAGKVPEPIVV
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PQAALRPRQTSLKQVTGPTSAHWNHPGGTARRAVSMEGNMGKGQRAAFGQPDGGRLKSA
CCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCHHH
KDALRAGTLHQAGDHKGAAQLYAASLKRDPKNPIVQHMYALCLRQIGRIPEAVAALRIST
HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ALDPRNVEALADYGSLLLQMGDRAAAREAFEKALALRPNHPVAKAGIARLSAVDGSLDDL
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHH
LRTVAEQPGNGQAALALGCAIISSGGEPDDAAKVWVEAVQRGALTPEDIGIEGVNAYRGG
HHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCHHHCCC
RDREALALLKIAATLKPTVAALHANLGMILLEKRRHAEAMEALGEALKVDPNHVGALLNL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
GSVCLDRKAYPEALAYLNRVLKIEPDNVVARLGAANASRQICQWRNVEQEEAAIAKLLAQ
HHHHHCCCCCHHHHHHHHHHEEECCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHH
SATRTGPFLLLSSHMTPKDHLRAARVWAQGVRVERDDKLPPAPPADPSRRIRIGYLSNDY
HCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
YNHATTFLAVEMFERHDREKFEIFAYSHSPDDKSDMRRRVVSAFDHFVEIERMSNPEAAR
HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RIRADGIDILVDLKGYTQGARSEIMALRPAPVQVNFLGYPGSMGADFIDYVVGDRFVTPL
HHHCCCCEEEEEECCCCCCCHHHEEEECCCCEEEEEECCCCCCCHHHHHHHHCCHHCCCH
SAAADYDEKIVQLPHCYQPNDRHRRISETLPSRAACGLPESGFVFCCFNNTYKITPAVFS
HHHCCHHHHHHCCCCCCCCCHHHHHHHHHCCCHHCCCCCCCCEEEEEECCCEEECHHHHH
VWMRLLDEVPDSVLWLYEANAAARDNLAYEAAKFGIEPDRIIFAPNALLADHLARHAHAD
HHHHHHHHCCCCEEEEEECCCCHHCCHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH
LFLDTLPYNAHTTASDALWAGVPIVTCAGETFAARVAASLLDAVGMPELITTSLADYEAL
HEEECCCCCCCCCCCCHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ALALARDPERLAGLKARLVEARATAPLFDSEKFTRDIEAAYQRMHALRSAGKVPEPIVV
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA