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The map label for this gene is fdhD [H]

Identifier: 158425079

GI number: 158425079

Start: 3972147

End: 3973028

Strand: Direct

Name: fdhD [H]

Synonym: AZC_3455

Alternate gene names: 158425079

Gene position: 3972147-3973028 (Clockwise)

Preceding gene: 158425078

Following gene: 158425080

Centisome position: 73.97

GC content: 70.29

Gene sequence:

>882_bases
ATGACCAAGGCCCCTTCCCTCTCCCCTGACGACCTGCCGGAGATTCCGGACATTCCGGAGCCCGTCCGGCAGGTGGCCCG
CGCGGTCTGGCGCGAGGGGGAGGTCGCGCAGGGCGAGCGCACGGTGCCGGAGGAAACGCCGGTGGCGCTCACCTATAACG
GCACCACGCATGCGGTGATGATGGCCTCGCCCATCGACATCGAGGCGTTTGCGCTCGGCTTCTCGCTCACCGAAGGCATC
ATCCGCTCGTCCGCCGACATCCTCTCCCTCGACGTGATCGCGGTGGAGGATGGCATCGAGGCCCGCATGTGGATCGCCGA
GGAGCGCATGGCGCTTCTGGGCGCCCGCCGCCGCTATCTCGCCGGCCCCACCGGCTGTGGCCTGTGCGGCGTTGAGAGCC
TCGCGGAAGCGGTGAAGCCGGCCGCGCAGGTGGCGGGGGATCTCGTCATCGAGGCCAGCGCGCTTCTGGAGGCCATGGCG
GCGCTGGGTCCCGCCCAGACGCTCAATCACGAGACGCGGGCGGTGCATGCCGCCGGTTTCTACCAGCCCGGCACCGGCCT
TCTGGCGGTGGCGGAGGACGTGGGCCGGCACAATGCCCTCGACAAGCTGGTGGGCAAGGTGGCGCGCCTGCCCGAGGCGA
ACCCCGCCTCCGGCGTGCTGCTGCTGACCAGCCGCGTCTCGATCGAGATGGTGCAGAAGGCCGCCGTCCTGGGTGTGCCG
GTCATCGCCGCCGTCTCGGCCCCCACCTCGCTTGCCATCCGCACAGCGGAGCGCGCGGGCATCACCCTGGCCGCCATCGT
GCGCAGCGATGGCTTTGAACTCTTCACCCATCCCCGGCGGATCAGCCTCGGGACGAACCAACGGCAAGCCCATGTCGCAT
AG

Upstream 100 bases:

>100_bases
GCGGGCGTGGTGGCGGCCGGGCCGGGTCACGGGCAGAGTGCTTGCAGTCGGAAGCCTTCGGTCCAATCTGTGAGACAGAC
CCCGTTTCGCGGATGGCATC

Downstream 100 bases:

>100_bases
CCAGCACCACCACGAGCACAGCCACGGCGGCCACGCCCACGAGGGCACGCACAAGAGCTCGGACGAGCGCCTCGTCTATA
TGGCGAACCAGATCGCCACC

Product: formate dehydrogenase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTKAPSLSPDDLPEIPDIPEPVRQVARAVWREGEVAQGERTVPEETPVALTYNGTTHAVMMASPIDIEAFALGFSLTEGI
IRSSADILSLDVIAVEDGIEARMWIAEERMALLGARRRYLAGPTGCGLCGVESLAEAVKPAAQVAGDLVIEASALLEAMA
ALGPAQTLNHETRAVHAAGFYQPGTGLLAVAEDVGRHNALDKLVGKVARLPEANPASGVLLLTSRVSIEMVQKAAVLGVP
VIAAVSAPTSLAIRTAERAGITLAAIVRSDGFELFTHPRRISLGTNQRQAHVA

Sequences:

>Translated_293_residues
MTKAPSLSPDDLPEIPDIPEPVRQVARAVWREGEVAQGERTVPEETPVALTYNGTTHAVMMASPIDIEAFALGFSLTEGI
IRSSADILSLDVIAVEDGIEARMWIAEERMALLGARRRYLAGPTGCGLCGVESLAEAVKPAAQVAGDLVIEASALLEAMA
ALGPAQTLNHETRAVHAAGFYQPGTGLLAVAEDVGRHNALDKLVGKVARLPEANPASGVLLLTSRVSIEMVQKAAVLGVP
VIAAVSAPTSLAIRTAERAGITLAAIVRSDGFELFTHPRRISLGTNQRQAHVA
>Mature_292_residues
TKAPSLSPDDLPEIPDIPEPVRQVARAVWREGEVAQGERTVPEETPVALTYNGTTHAVMMASPIDIEAFALGFSLTEGII
RSSADILSLDVIAVEDGIEARMWIAEERMALLGARRRYLAGPTGCGLCGVESLAEAVKPAAQVAGDLVIEASALLEAMAA
LGPAQTLNHETRAVHAAGFYQPGTGLLAVAEDVGRHNALDKLVGKVARLPEANPASGVLLLTSRVSIEMVQKAAVLGVPV
IAAVSAPTSLAIRTAERAGITLAAIVRSDGFELFTHPRRISLGTNQRQAHVA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=262, Percent_Identity=43.5114503816794, Blast_Score=203, Evalue=8e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 30739; Mature: 30607

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKAPSLSPDDLPEIPDIPEPVRQVARAVWREGEVAQGERTVPEETPVALTYNGTTHAVM
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEE
MASPIDIEAFALGFSLTEGIIRSSADILSLDVIAVEDGIEARMWIAEERMALLGARRRYL
EECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
AGPTGCGLCGVESLAEAVKPAAQVAGDLVIEASALLEAMAALGPAQTLNHETRAVHAAGF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHEEEECCC
YQPGTGLLAVAEDVGRHNALDKLVGKVARLPEANPASGVLLLTSRVSIEMVQKAAVLGVP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHCCH
VIAAVSAPTSLAIRTAERAGITLAAIVRSDGFELFTHPRRISLGTNQRQAHVA
HHHHHCCCCHHEEEEHHHCCEEEEEEEECCCCEEEECCEEEECCCCCCCCCCC
>Mature Secondary Structure 
TKAPSLSPDDLPEIPDIPEPVRQVARAVWREGEVAQGERTVPEETPVALTYNGTTHAVM
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEE
MASPIDIEAFALGFSLTEGIIRSSADILSLDVIAVEDGIEARMWIAEERMALLGARRRYL
EECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
AGPTGCGLCGVESLAEAVKPAAQVAGDLVIEASALLEAMAALGPAQTLNHETRAVHAAGF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHEEEECCC
YQPGTGLLAVAEDVGRHNALDKLVGKVARLPEANPASGVLLLTSRVSIEMVQKAAVLGVP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHCCH
VIAAVSAPTSLAIRTAERAGITLAAIVRSDGFELFTHPRRISLGTNQRQAHVA
HHHHHCCCCHHEEEEHHHCCEEEEEEEECCCCEEEECCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]