| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425042
Identifier: 158425042
GI number: 158425042
Start: 3943926
End: 3944699
Strand: Direct
Name: 158425042
Synonym: AZC_3418
Alternate gene names: NA
Gene position: 3943926-3944699 (Clockwise)
Preceding gene: 158425041
Following gene: 158425043
Centisome position: 73.45
GC content: 69.77
Gene sequence:
>774_bases ATGACGGATGACATCGACGAGGCTCTGGACTGGCAGGGCCACGACATCGATTGCGCTAGCTGCACCCATCGCGACATCGA GGCCGAAGGCCGCTGCCGGCTGAAGCATGCCTGCGTGCATGATCGCTACGCCCGGCGCATCGACCGTTTCTTCAACTGGA ACCCCGGCCTCGCCAACCGTTATGTGGCGCATCCGCATTTCGAGGTGCGGGCCATCGCCGCCAAGCACGCCAGCACCTTC CTGCTGCCGCCGCTGCTGGAGGATCCGGAGGAGACCGTGCGCTGGAATGCGGCGCGCCGCTTGCCCAAGCGCCTCATCCT GCCGCTGCGCCACGATCCGCACCGGGAGGTGCGCATCCGCATCGTCTCCCTGCTGGAAGATGCCGACCTCGGCCCGATGA TGGCGGACGAGGATTATTATGTGCGCCTCGTGGTCGCCCGGCGCGTGCCGCCCGCCCTGCTCGGGCGAATGATGGCCGAT CCGGAGACGGAGGTCCGCCGCGTCGTCGCGCAGCGCCTGCCCCGCGAGTGGCTGCTGCGCATGGCCGATGACGCCGACGC CACCGTGCGGCTTGAGATCGCCCGCCGCCTTTCGCCCGACCTCGTGGCACGGCTCAAGAACGATGCGGACTGGCGTGTGC GCTATGAGGTGGCCTGCGCCGCCCCCGTCGGCGAACTCGCCGCTCTCGCCGACGACTGCGACGATCTTGTGCGCGAGGCC GCCCGCGCCCGGCAGGCGACGCCGTACGCCGACGGCATCGGGAGCCGGCCATGA
Upstream 100 bases:
>100_bases GAAGGGCGTGCCGCCGCCACCAAGCTGATGCAGCTCGACCCGAGCGACAAGATCGGCGCCCGCGTGCTGCTCGACATTCT GGACCGGGCGGAGCAAGACG
Downstream 100 bases:
>100_bases GCAACATTGTTCGCGACAGCGACGTGGTGGAACTGAATGATCCGCCCTATTTCTCCTATGGCGAGAAGGTGCGCGCCCGC CGCACCATCCGGAACGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTDDIDEALDWQGHDIDCASCTHRDIEAEGRCRLKHACVHDRYARRIDRFFNWNPGLANRYVAHPHFEVRAIAAKHASTF LLPPLLEDPEETVRWNAARRLPKRLILPLRHDPHREVRIRIVSLLEDADLGPMMADEDYYVRLVVARRVPPALLGRMMAD PETEVRRVVAQRLPREWLLRMADDADATVRLEIARRLSPDLVARLKNDADWRVRYEVACAAPVGELAALADDCDDLVREA ARARQATPYADGIGSRP
Sequences:
>Translated_257_residues MTDDIDEALDWQGHDIDCASCTHRDIEAEGRCRLKHACVHDRYARRIDRFFNWNPGLANRYVAHPHFEVRAIAAKHASTF LLPPLLEDPEETVRWNAARRLPKRLILPLRHDPHREVRIRIVSLLEDADLGPMMADEDYYVRLVVARRVPPALLGRMMAD PETEVRRVVAQRLPREWLLRMADDADATVRLEIARRLSPDLVARLKNDADWRVRYEVACAAPVGELAALADDCDDLVREA ARARQATPYADGIGSRP >Mature_256_residues TDDIDEALDWQGHDIDCASCTHRDIEAEGRCRLKHACVHDRYARRIDRFFNWNPGLANRYVAHPHFEVRAIAAKHASTFL LPPLLEDPEETVRWNAARRLPKRLILPLRHDPHREVRIRIVSLLEDADLGPMMADEDYYVRLVVARRVPPALLGRMMADP ETEVRRVVAQRLPREWLLRMADDADATVRLEIARRLSPDLVARLKNDADWRVRYEVACAAPVGELAALADDCDDLVREAA RARQATPYADGIGSRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR004830 - InterPro: IPR008665 [H]
Pfam domain/function: PF01816 LRV; PF05484 LRV_FeS [H]
EC number: NA
Molecular weight: Translated: 29430; Mature: 29299
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDIDEALDWQGHDIDCASCTHRDIEAEGRCRLKHACVHDRYARRIDRFFNWNPGLANR CCCCHHHHHCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC YVAHPHFEVRAIAAKHASTFLLPPLLEDPEETVRWNAARRLPKRLILPLRHDPHREVRIR CCCCCCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHH IVSLLEDADLGPMMADEDYYVRLVVARRVPPALLGRMMADPETEVRRVVAQRLPREWLLR HHHHHHCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH MADDADATVRLEIARRLSPDLVARLKNDADWRVRYEVACAAPVGELAALADDCDDLVREA HCCCCCCEEEEHHHHHCCHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHH ARARQATPYADGIGSRP HHHHCCCCCCCCCCCCC >Mature Secondary Structure TDDIDEALDWQGHDIDCASCTHRDIEAEGRCRLKHACVHDRYARRIDRFFNWNPGLANR CCCHHHHHCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC YVAHPHFEVRAIAAKHASTFLLPPLLEDPEETVRWNAARRLPKRLILPLRHDPHREVRIR CCCCCCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHH IVSLLEDADLGPMMADEDYYVRLVVARRVPPALLGRMMADPETEVRRVVAQRLPREWLLR HHHHHHCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH MADDADATVRLEIARRLSPDLVARLKNDADWRVRYEVACAAPVGELAALADDCDDLVREA HCCCCCCEEEEHHHHHCCHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHH ARARQATPYADGIGSRP HHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2836706 [H]