| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is phnI [H]
Identifier: 158425018
GI number: 158425018
Start: 3924476
End: 3925591
Strand: Direct
Name: phnI [H]
Synonym: AZC_3394
Alternate gene names: 158425018
Gene position: 3924476-3925591 (Clockwise)
Preceding gene: 158425017
Following gene: 158425019
Centisome position: 73.08
GC content: 69.0
Gene sequence:
>1116_bases ATGTATGTGGCCGTCAAGGGTGGCGAGACCGCCATCCGCAACGCCCATGCCCTGCTCGCCGAGACCCGGCGTGGGGATAC GTCGGTGCCGGAGATCGGCATCGACCAGATCGCCGGCCAGCTCACGCTGGCGGTGGATCGCGTGATGAGCGAAGGCTCGC TTTATGACCGCCCACTCGCCGCGCTTGCCATCAAGCAGGCGCGCGGCGATCTCATCGAGGCCATCTTCCTCGTGCGCGCC TTCCGCACCACCTTGCCCCGCTTCGGCTATAGCGAGCCGGTGGACACGGGCCGGATGCGCGTGGAACGGCGCATCTCCGC CACCTACAAGGACATTCCGGGCGGCCAGGTGCTCGGCCCCACCTTCGATTACACCCATCGCCTGCTGGACCCGACGCTCG CGACGACCGGCGGCGCGGCCGGTGCGCCCAAGGGCCAGCCCGCACGCGCGGACGGCGCGGCGGAGCCCGGTCCCATGCCC CGCGTCACCGATCTTCTGGGCGACGAGGGGCTGATCGAGCCGGCGCCCGCCACCGGCGAGGAGCCGCGCGATCTCACCCG GGAACCCTTGAGCTTCCCCGCCGACCGTCCCCTCCGCCTCCAGAATCTCGCGCGGGGCGATGAGGGCTTCCTGCTCTCGC TCGGCTATTCCACCCAGCGCGGCTATGCCCGCAGCCATCCCTTCGTGGGCGAGATCCGCTTCGGCACCGTCGAGGTGGAG CTGTTCGTGGAGGAACTGGGCTTTGCGGTGCCGCTCGGCGACATCGCGCTCACCGAGTGCCAGATGGTGAACCAGTTCAA GGGCTCCGCCAGCGAGCCGCCGAAGTTCACGCGCGGCTATGGCCTCGTGTTCGGCCAGAGCGAGCGCAAGGCCATGTCGG TGGCGCTGGTGGATCGCGCGCTCCGCTTCAAGGAACTGGGCGAAGAACAGTCCGCCCCCGCGCAGGACGAGGAATTTGTC CTCTCCCACTCCGACAATGTGCAGGCCACCGGCTTCGTGGAGCATCTGAAGCTGCCGCACTACGTGGATTTCCAGGCCGA ACTCGACCTCGTGCGCCGGATGCGCGCCGAGCATGCGGACGGCACCGAGACCAGCCAGCAGGAGGCGGCGGAATGA
Upstream 100 bases:
>100_bases CCGGCTGCTGTTTCCGCTGGGTGTCGATCTCATCTTCACCACGTCAGGGCTGGTGTCGGCCCTGCCGCGCTCCACCCGCA TCACCGCGGAGGCCTGATCC
Downstream 100 bases:
>100_bases ACGCGCCCTTCGAAACCGCACAGGCGTCAACGCCCGCCGGCATGCCGGCCATCACCTACAATTTTGCCTATCTGGACGAG CAGACGAAAAGGATGATCCG
Product: phosphonate metabolism protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MYVAVKGGETAIRNAHALLAETRRGDTSVPEIGIDQIAGQLTLAVDRVMSEGSLYDRPLAALAIKQARGDLIEAIFLVRA FRTTLPRFGYSEPVDTGRMRVERRISATYKDIPGGQVLGPTFDYTHRLLDPTLATTGGAAGAPKGQPARADGAAEPGPMP RVTDLLGDEGLIEPAPATGEEPRDLTREPLSFPADRPLRLQNLARGDEGFLLSLGYSTQRGYARSHPFVGEIRFGTVEVE LFVEELGFAVPLGDIALTECQMVNQFKGSASEPPKFTRGYGLVFGQSERKAMSVALVDRALRFKELGEEQSAPAQDEEFV LSHSDNVQATGFVEHLKLPHYVDFQAELDLVRRMRAEHADGTETSQQEAAE
Sequences:
>Translated_371_residues MYVAVKGGETAIRNAHALLAETRRGDTSVPEIGIDQIAGQLTLAVDRVMSEGSLYDRPLAALAIKQARGDLIEAIFLVRA FRTTLPRFGYSEPVDTGRMRVERRISATYKDIPGGQVLGPTFDYTHRLLDPTLATTGGAAGAPKGQPARADGAAEPGPMP RVTDLLGDEGLIEPAPATGEEPRDLTREPLSFPADRPLRLQNLARGDEGFLLSLGYSTQRGYARSHPFVGEIRFGTVEVE LFVEELGFAVPLGDIALTECQMVNQFKGSASEPPKFTRGYGLVFGQSERKAMSVALVDRALRFKELGEEQSAPAQDEEFV LSHSDNVQATGFVEHLKLPHYVDFQAELDLVRRMRAEHADGTETSQQEAAE >Mature_371_residues MYVAVKGGETAIRNAHALLAETRRGDTSVPEIGIDQIAGQLTLAVDRVMSEGSLYDRPLAALAIKQARGDLIEAIFLVRA FRTTLPRFGYSEPVDTGRMRVERRISATYKDIPGGQVLGPTFDYTHRLLDPTLATTGGAAGAPKGQPARADGAAEPGPMP RVTDLLGDEGLIEPAPATGEEPRDLTREPLSFPADRPLRLQNLARGDEGFLLSLGYSTQRGYARSHPFVGEIRFGTVEVE LFVEELGFAVPLGDIALTECQMVNQFKGSASEPPKFTRGYGLVFGQSERKAMSVALVDRALRFKELGEEQSAPAQDEEFV LSHSDNVQATGFVEHLKLPHYVDFQAELDLVRRMRAEHADGTETSQQEAAE
Specific function: Belongs to an operon involved in utilization of glyphosate and other phosphonates [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=361, Percent_Identity=60.9418282548476, Blast_Score=436, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 40407; Mature: 40407
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAVKGGETAIRNAHALLAETRRGDTSVPEIGIDQIAGQLTLAVDRVMSEGSLYDRPLA CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH ALAIKQARGDLIEAIFLVRAFRTTLPRFGYSEPVDTGRMRVERRISATYKDIPGGQVLGP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECC TFDYTHRLLDPTLATTGGAAGAPKGQPARADGAAEPGPMPRVTDLLGDEGLIEPAPATGE CHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC EPRDLTREPLSFPADRPLRLQNLARGDEGFLLSLGYSTQRGYARSHPFVGEIRFGTVEVE CCHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECEEEEE LFVEELGFAVPLGDIALTECQMVNQFKGSASEPPKFTRGYGLVFGQSERKAMSVALVDRA HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH LRFKELGEEQSAPAQDEEFVLSHSDNVQATGFVEHLKLPHYVDFQAELDLVRRMRAEHAD HHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCEECHHHHHHHHHHHHHHCCC GTETSQQEAAE CCCCCHHHCCC >Mature Secondary Structure MYVAVKGGETAIRNAHALLAETRRGDTSVPEIGIDQIAGQLTLAVDRVMSEGSLYDRPLA CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH ALAIKQARGDLIEAIFLVRAFRTTLPRFGYSEPVDTGRMRVERRISATYKDIPGGQVLGP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECC TFDYTHRLLDPTLATTGGAAGAPKGQPARADGAAEPGPMPRVTDLLGDEGLIEPAPATGE CHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC EPRDLTREPLSFPADRPLRLQNLARGDEGFLLSLGYSTQRGYARSHPFVGEIRFGTVEVE CCHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECEEEEE LFVEELGFAVPLGDIALTECQMVNQFKGSASEPPKFTRGYGLVFGQSERKAMSVALVDRA HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH LRFKELGEEQSAPAQDEEFVLSHSDNVQATGFVEHLKLPHYVDFQAELDLVRRMRAEHAD HHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCEECHHHHHHHHHHHHHHCCC GTETSQQEAAE CCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]