| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425006
Identifier: 158425006
GI number: 158425006
Start: 3911449
End: 3912414
Strand: Direct
Name: 158425006
Synonym: AZC_3382
Alternate gene names: NA
Gene position: 3911449-3912414 (Clockwise)
Preceding gene: 158425005
Following gene: 158425007
Centisome position: 72.84
GC content: 70.81
Gene sequence:
>966_bases ATGAGCCCATCCGCACCCGATTATTCCGGCCCGGCCTTCACCGGCCTCGTCGCCCGGCTGGACGAACTGATCGCCGCCCG TCCCGGCGGGCGGGACGGCTTCGGCACGTCCGGGCGCGTGCGCACGCGGCAGATGGGCGGCTATCGCTCGCCCTTCCGCG GACGGGGCATGGAGTTTGACGAGGTGCGCGCCTATCAGCCCGGCGACGACATCCGCACCATCGACTGGCGCGTCACCGCC CGCACCGGCCGCACCCACACCAAGCTCTTCCAGGAGGAGCGCGAGCGCCCGGTCCTCATCCTCATGGATGCACGGGCCTT CATGCGCTTCGGCACCCGCGCCTGCTTCAAGTCCGTGCTCGCCGCCAAGGCCGCCGCCGTGCTCGCCTGGACTTCCATGG ACGGCGGCGACCGTGTGGGCGGGCTCCTCGTCACGCCCTATGCCCTCAAGGTCTTCAGCGCCGAGCGCAGCCGCTCGCGC GTGCTGGGCTTCGTGAAGGGCATGGCCGAGGCGACGCAGGTGGGCTTCGGCGCTGAACCGCCGGAGGCCGAACCATCTCT CGCCGAGGCCTTCGCCCGCCTGCGCCACGCGGCACGGCCTGGTACGCTGGTCTTCATCGTCAGCGATTTTCATGATTTCG ACGGCGAGGCGGCCAAGGAGCTGAACCGCCTGTCGCACCATGCGCATATCACCAACGTCTTCATCTATGACGCGCTGGAG GCGGCAACACCGGCCCGCGGCGCCTATCCGGTGAGCGATGGAGAGGCGGTGGCGACGCTCGATGCCGACCGGGATGCCGT GCGGCAGGCCTATGCCCGGCGCTTCGCCATGCGCCGGGAGGCCGTGGAAGAGGCCGCCCGCTCGCGGGGCATGTCCTTCC TCATGCTGCGCACGGGGGAAGATCCGGCCGAGGCCCTCCACCCCGAGCGGCTGGCACGCAAGATGCGCGCGGGAGCGGCG GCTTGA
Upstream 100 bases:
>100_bases TTCGAGGCGCAGGCGGACGGCATGACCACCGACCGCTTCCTCGACACCCTGCTCGCCCGCGTGCCGGTGGCGTGAGGACG GTGCGTCCGGCGGCACTGCC
Downstream 100 bases:
>100_bases TCGCGAGCCTCTCCCTGCCCCGCGGTGACGCGCTCCTGCGCCTCGCGCAGTTCCAGCCCGCGCCCGGCAGCGCCCCAGCC GCTGCGCCCGGTGGCGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSPSAPDYSGPAFTGLVARLDELIAARPGGRDGFGTSGRVRTRQMGGYRSPFRGRGMEFDEVRAYQPGDDIRTIDWRVTA RTGRTHTKLFQEERERPVLILMDARAFMRFGTRACFKSVLAAKAAAVLAWTSMDGGDRVGGLLVTPYALKVFSAERSRSR VLGFVKGMAEATQVGFGAEPPEAEPSLAEAFARLRHAARPGTLVFIVSDFHDFDGEAAKELNRLSHHAHITNVFIYDALE AATPARGAYPVSDGEAVATLDADRDAVRQAYARRFAMRREAVEEAARSRGMSFLMLRTGEDPAEALHPERLARKMRAGAA A
Sequences:
>Translated_321_residues MSPSAPDYSGPAFTGLVARLDELIAARPGGRDGFGTSGRVRTRQMGGYRSPFRGRGMEFDEVRAYQPGDDIRTIDWRVTA RTGRTHTKLFQEERERPVLILMDARAFMRFGTRACFKSVLAAKAAAVLAWTSMDGGDRVGGLLVTPYALKVFSAERSRSR VLGFVKGMAEATQVGFGAEPPEAEPSLAEAFARLRHAARPGTLVFIVSDFHDFDGEAAKELNRLSHHAHITNVFIYDALE AATPARGAYPVSDGEAVATLDADRDAVRQAYARRFAMRREAVEEAARSRGMSFLMLRTGEDPAEALHPERLARKMRAGAA A >Mature_320_residues SPSAPDYSGPAFTGLVARLDELIAARPGGRDGFGTSGRVRTRQMGGYRSPFRGRGMEFDEVRAYQPGDDIRTIDWRVTAR TGRTHTKLFQEERERPVLILMDARAFMRFGTRACFKSVLAAKAAAVLAWTSMDGGDRVGGLLVTPYALKVFSAERSRSRV LGFVKGMAEATQVGFGAEPPEAEPSLAEAFARLRHAARPGTLVFIVSDFHDFDGEAAKELNRLSHHAHITNVFIYDALEA ATPARGAYPVSDGEAVATLDADRDAVRQAYARRFAMRREAVEEAARSRGMSFLMLRTGEDPAEALHPERLARKMRAGAAA
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.avium MAV169 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002881 - InterPro: IPR002035 [H]
Pfam domain/function: PF01882 DUF58 [H]
EC number: NA
Molecular weight: Translated: 35123; Mature: 34992
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSAPDYSGPAFTGLVARLDELIAARPGGRDGFGTSGRVRTRQMGGYRSPFRGRGMEFD CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCCCHH EVRAYQPGDDIRTIDWRVTARTGRTHTKLFQEERERPVLILMDARAFMRFGTRACFKSVL HHCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHH AAKAAAVLAWTSMDGGDRVGGLLVTPYALKVFSAERSRSRVLGFVKGMAEATQVGFGAEP HHHHHHHEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PEAEPSLAEAFARLRHAARPGTLVFIVSDFHDFDGEAAKELNRLSHHAHITNVFIYDALE CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AATPARGAYPVSDGEAVATLDADRDAVRQAYARRFAMRREAVEEAARSRGMSFLMLRTGE HCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC DPAEALHPERLARKMRAGAAA CHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure SPSAPDYSGPAFTGLVARLDELIAARPGGRDGFGTSGRVRTRQMGGYRSPFRGRGMEFD CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCCCHH EVRAYQPGDDIRTIDWRVTARTGRTHTKLFQEERERPVLILMDARAFMRFGTRACFKSVL HHCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHH AAKAAAVLAWTSMDGGDRVGGLLVTPYALKVFSAERSRSRVLGFVKGMAEATQVGFGAEP HHHHHHHEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PEAEPSLAEAFARLRHAARPGTLVFIVSDFHDFDGEAAKELNRLSHHAHITNVFIYDALE CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AATPARGAYPVSDGEAVATLDADRDAVRQAYARRFAMRREAVEEAARSRGMSFLMLRTGE HCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC DPAEALHPERLARKMRAGAAA CHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]