| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424955
Identifier: 158424955
GI number: 158424955
Start: 3858242
End: 3859471
Strand: Direct
Name: 158424955
Synonym: AZC_3331
Alternate gene names: NA
Gene position: 3858242-3859471 (Clockwise)
Preceding gene: 158424954
Following gene: 158424956
Centisome position: 71.85
GC content: 61.87
Gene sequence:
>1230_bases ATGATCGCACGACCCGCGAGGAGGACATTCATGTCTGCCACTCCAGCCGCCCCCCGCCGCGCCCGCATCGGCGTGCTCAT GCCCGCCGGCAAGGTGATGGATCATGATCGCGTGGTCACCCACACCTATGGCGATCCGGAAAAGGCGACCTCGCTTTTCA CCAATATCGGCGACTGCTTCGTGTTCGAGTCCTCGCTCCGCATCCTCGATTATGCGGACGTGCAGCCCATCTATGCAGGC GAGAACACGGTTCCCTCCGACGCTTACGTGGAAAAGCTGAACCAGCTCGATTTCCTGTTCCTGCGCGGCTCAAACTACAT CAACACCAATGGCAAGTGGGACGCCATCACCGCGCTGCTGGAGCGCACGAAGGTGCCGGTCATGGCCTTCGGCATCGGCG TGCAGACGCCGGACAATTCCGAGGACTATGTGAACGAGTCCACCAAGCGCTTCCTGCAGCTGGTGGCCGACCGTTCCACC TCCATCGCCATCCGCGGCACGCTCTCGCAGAAGGCGCTTAAGTCCATCGGCATCGACAAGGTGCGCATCATCGGCTGCCC GACCGCCTTCCGCCACCGCAAGCCCACCATCTCCATCAAGCGCATCGCCAGCGGCGACATCTCGAACCTCGGCTTCACGC TGCGCCGCAAGACGCACGGCAGCCAGACCCTGCAACGCTACATGCTGCGCACGCTGGCCGAGCAGTACAAGACGCGCATT TTCTGCGCCGGCGAACTGGAAGAGAAGCAGATCTTCTATGCCGAGCGCGGCATGCTGAAGGACTCCGGCGACGTGCAGGC GAAAGCCATTGATGCGTTGATCAATGAGAACTGGTTCTATGGCCCCAGGGATCCTCTGATCGATCTCTACAAGTCCCAGC TCGCCGTCTTCGAAGCGGTGCAGGATTTCGAGGCCGGGCTGAAGGAGATGGACGGCGTGACCGGCTTCCGCCTGCACGGC AACCTGCTGGCGCTCGCCAATGGCGTGCCGGCGCTCTATGTCACCTACGACACGCGCACCCGCGAATTCGTTCAGACGCT CGGCATCCCCTCCATCGACATCAAGCAGATGGACCGCTTCTCCTTCCAGAAGGCCTGGGACAAGGCCGATTTCGGCACCT TTGAGAAGGCCTATGCCCTGCGCTTCAAGGAGCTGAAGGCTTTCCTTGAAGAGAATGGCATGCCCCACCGCCTGGAGCGC CCGATGCCCAAGCTCGTGGCCGCCGAATGA
Upstream 100 bases:
>100_bases TCGATTTTCAAAGTATATTTTTAATATTGCGCGCCGCAAAACTGCGGGCAAGATAATGAAACCAGCGTAGACAGAGAGAC CGCGCTGCCCTGTCCCACCA
Downstream 100 bases:
>100_bases GGGCGCGCGTCGCGTGAGCGGGCTCTTGCCGATGCTTCGCCGGGCGCTGCTGGCGCTCGGTGGGGCCCTCCTGATCCTGC GCGGCACCGCCGCGTCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MIARPARRTFMSATPAAPRRARIGVLMPAGKVMDHDRVVTHTYGDPEKATSLFTNIGDCFVFESSLRILDYADVQPIYAG ENTVPSDAYVEKLNQLDFLFLRGSNYINTNGKWDAITALLERTKVPVMAFGIGVQTPDNSEDYVNESTKRFLQLVADRST SIAIRGTLSQKALKSIGIDKVRIIGCPTAFRHRKPTISIKRIASGDISNLGFTLRRKTHGSQTLQRYMLRTLAEQYKTRI FCAGELEEKQIFYAERGMLKDSGDVQAKAIDALINENWFYGPRDPLIDLYKSQLAVFEAVQDFEAGLKEMDGVTGFRLHG NLLALANGVPALYVTYDTRTREFVQTLGIPSIDIKQMDRFSFQKAWDKADFGTFEKAYALRFKELKAFLEENGMPHRLER PMPKLVAAE
Sequences:
>Translated_409_residues MIARPARRTFMSATPAAPRRARIGVLMPAGKVMDHDRVVTHTYGDPEKATSLFTNIGDCFVFESSLRILDYADVQPIYAG ENTVPSDAYVEKLNQLDFLFLRGSNYINTNGKWDAITALLERTKVPVMAFGIGVQTPDNSEDYVNESTKRFLQLVADRST SIAIRGTLSQKALKSIGIDKVRIIGCPTAFRHRKPTISIKRIASGDISNLGFTLRRKTHGSQTLQRYMLRTLAEQYKTRI FCAGELEEKQIFYAERGMLKDSGDVQAKAIDALINENWFYGPRDPLIDLYKSQLAVFEAVQDFEAGLKEMDGVTGFRLHG NLLALANGVPALYVTYDTRTREFVQTLGIPSIDIKQMDRFSFQKAWDKADFGTFEKAYALRFKELKAFLEENGMPHRLER PMPKLVAAE >Mature_409_residues MIARPARRTFMSATPAAPRRARIGVLMPAGKVMDHDRVVTHTYGDPEKATSLFTNIGDCFVFESSLRILDYADVQPIYAG ENTVPSDAYVEKLNQLDFLFLRGSNYINTNGKWDAITALLERTKVPVMAFGIGVQTPDNSEDYVNESTKRFLQLVADRST SIAIRGTLSQKALKSIGIDKVRIIGCPTAFRHRKPTISIKRIASGDISNLGFTLRRKTHGSQTLQRYMLRTLAEQYKTRI FCAGELEEKQIFYAERGMLKDSGDVQAKAIDALINENWFYGPRDPLIDLYKSQLAVFEAVQDFEAGLKEMDGVTGFRLHG NLLALANGVPALYVTYDTRTREFVQTLGIPSIDIKQMDRFSFQKAWDKADFGTFEKAYALRFKELKAFLEENGMPHRLER PMPKLVAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46121; Mature: 46121
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIARPARRTFMSATPAAPRRARIGVLMPAGKVMDHDRVVTHTYGDPEKATSLFTNIGDCF CCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHE VFESSLRILDYADVQPIYAGENTVPSDAYVEKLNQLDFLFLRGSNYINTNGKWDAITALL EEECCCCEEECCCCCEEECCCCCCCCHHHHHHHCCCEEEEEECCCEECCCCCHHHHHHHH ERTKVPVMAFGIGVQTPDNSEDYVNESTKRFLQLVADRSTSIAIRGTLSQKALKSIGIDK HHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCE VRIIGCPTAFRHRKPTISIKRIASGDISNLGFTLRRKTHGSQTLQRYMLRTLAEQYKTRI EEEEECCHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCEE FCAGELEEKQIFYAERGMLKDSGDVQAKAIDALINENWFYGPRDPLIDLYKSQLAVFEAV EEECCCCCHHEEHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH QDFEAGLKEMDGVTGFRLHGNLLALANGVPALYVTYDTRTREFVQTLGIPSIDIKQMDRF HHHHHHHHHHCCCCEEEECCCEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHH SFQKAWDKADFGTFEKAYALRFKELKAFLEENGMPHRLERPMPKLVAAE HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCC >Mature Secondary Structure MIARPARRTFMSATPAAPRRARIGVLMPAGKVMDHDRVVTHTYGDPEKATSLFTNIGDCF CCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHE VFESSLRILDYADVQPIYAGENTVPSDAYVEKLNQLDFLFLRGSNYINTNGKWDAITALL EEECCCCEEECCCCCEEECCCCCCCCHHHHHHHCCCEEEEEECCCEECCCCCHHHHHHHH ERTKVPVMAFGIGVQTPDNSEDYVNESTKRFLQLVADRSTSIAIRGTLSQKALKSIGIDK HHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCE VRIIGCPTAFRHRKPTISIKRIASGDISNLGFTLRRKTHGSQTLQRYMLRTLAEQYKTRI EEEEECCHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCEE FCAGELEEKQIFYAERGMLKDSGDVQAKAIDALINENWFYGPRDPLIDLYKSQLAVFEAV EEECCCCCHHEEHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH QDFEAGLKEMDGVTGFRLHGNLLALANGVPALYVTYDTRTREFVQTLGIPSIDIKQMDRF HHHHHHHHHHCCCCEEEECCCEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHH SFQKAWDKADFGTFEKAYALRFKELKAFLEENGMPHRLERPMPKLVAAE HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA