Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is 158424942

Identifier: 158424942

GI number: 158424942

Start: 3841026

End: 3841340

Strand: Direct

Name: 158424942

Synonym: AZC_3318

Alternate gene names: NA

Gene position: 3841026-3841340 (Clockwise)

Preceding gene: 158424941

Following gene: 158424953

Centisome position: 71.53

GC content: 74.6

Gene sequence:

>315_bases
ATGGCCTTCTGCCGCGAGACTGCCGACGGGCTTGAGGTCAGCGTGCGCGCCACCCCCAAGGGTGGCCGCGACGCCCTCGA
CGGCGTGAGCCAGCTGTCCGATGGGCGCGACGTTCTGAAGATCCGCGTCCGGGCGGCGCCCGAGGATGGCGCGGCCACCG
CCGCCGTCGCCAAGGTTCTGGCTGGCGCCGCGGGCGTTGCCCCCTCCGCCGTGCGCCTCGCCTCAGGCGCCACGGCGCGC
CTCAAGGTATTCCGCATTTCGGGCGACGCCGCCCGCCTGCGCGCGACACTCGAAGCGGCCGTCGCCGCCCTTTGA

Upstream 100 bases:

>100_bases
CGGCCTCGATCTCTCCCCCATGGTACTGATCCTGATCATCTTTTTCCTGGAGCGGGTGATCGCCTACTACATCTACCCCA
TGGTGTTCTGATCCTGCCCC

Downstream 100 bases:

>100_bases
TCTTCCGTTAAGTCGCAGAAACGCAAACGGCCCGCCGAAGCGGGCCGTCCGGCTGAGGCATGCGCCGATCAGGCGACCTT
GCGTTCGGGCGCTTCCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MAFCRETADGLEVSVRATPKGGRDALDGVSQLSDGRDVLKIRVRAAPEDGAATAAVAKVLAGAAGVAPSAVRLASGATAR
LKVFRISGDAARLRATLEAAVAAL

Sequences:

>Translated_104_residues
MAFCRETADGLEVSVRATPKGGRDALDGVSQLSDGRDVLKIRVRAAPEDGAATAAVAKVLAGAAGVAPSAVRLASGATAR
LKVFRISGDAARLRATLEAAVAAL
>Mature_103_residues
AFCRETADGLEVSVRATPKGGRDALDGVSQLSDGRDVLKIRVRAAPEDGAATAAVAKVLAGAAGVAPSAVRLASGATARL
KVFRISGDAARLRATLEAAVAAL

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 10414; Mature: 10283

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFCRETADGLEVSVRATPKGGRDALDGVSQLSDGRDVLKIRVRAAPEDGAATAAVAKVL
CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHH
AGAAGVAPSAVRLASGATARLKVFRISGDAARLRATLEAAVAAL
HCCCCCCCCHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AFCRETADGLEVSVRATPKGGRDALDGVSQLSDGRDVLKIRVRAAPEDGAATAAVAKVL
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHH
AGAAGVAPSAVRLASGATARLKVFRISGDAARLRATLEAAVAAL
HCCCCCCCCHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA