| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424927
Identifier: 158424927
GI number: 158424927
Start: 3815463
End: 3818003
Strand: Reverse
Name: 158424927
Synonym: AZC_3303
Alternate gene names: NA
Gene position: 3818003-3815463 (Counterclockwise)
Preceding gene: 158424928
Following gene: 158424926
Centisome position: 71.1
GC content: 69.85
Gene sequence:
>2541_bases ATGGAGCGCGGCACGCGCAAGGGGAGGCGAGACGGCGTGTCCGGTGCGGAGACCCGCAGCATCGATTTCGAACAGGCGGC CGTCGAGAGCGTTCTCGGCGGTTACGAGACGTTGCCCGGTGTCCGCGACGAGATGATGGATGCGGACGGCCAGCCCCGTC CCCATTGGGTGGCCTTCCTTGCGGAACTCGCCGAACTCGGGCCCGATGGCATCCGTCGCCGCTTCTCCGCCGCAGACCGC TATTTGCGCGAATCCGGTGTCTTCTATCGGGTCTATGACGATGCGGGCGGCAACGAGCGCCCCTGGTCGCTGAGCCACAT CCCCCTGCTGCTGGAAAAGTCCGACTGGCAGGTGCTGGCCGAGGGCCTGATCGAGCGCGCCGAACTCCTCGAAGCCCTGC TGGCCGATCTCTATGGCCCCGGCGCCCTTGTGGCGGGCGGGGCACTGCCTGCTGCGGCCGTTGCCGGCAGCCCGGAATTC CTGCGCCCGCTGGTGGGCGTTGCACCGCGTGGCGGGCGTTACCTGCGCTTCTATGCAGCGGACGTGGGCCGTGGCCCGGA CGGGCGCTGGTGGGTGCTCTCGGACCGCACGCAGGCGCCGTCCGGCGTCGGCTATGCGCTGGAGAACAGGCTCGCGGTCA CGCGCGCCCTGCCGGATGTCTCGCGCACCCTGCGCATGGAGCGCCTCGCTTCCTTCTTCCAGAATTTCCGGGCCTCGCTG CTGAAGCTCGACACCACGGGTGAAGGGCGCGTCGGCCTGCTCACCCCCGGATCGCTGAACGAGACCTATTTCGAGCATGC ACTGCTCGCCCGCTATCTCGGCTTCCTGCTCGTGGAAGGCGAGGACCTGACCGTGCGGGGCGACGCGGTGAACGTGCGCA CCGTCGCCGGTCTCAAGCGCATCGACGTGCTGCTGCGCCGGCTGGACGCGGATTTCGGCGATCCGCTGGAGCTGAATGCC CATTCACGGCTCGGTGTGCCCGGTCTTGTCCATGCGGTACGGCAGGGCGGCGTGGCGCTGGCCAATGCGCTCGGCTCCGG CCTCGTGGAGGCACCGGCGCTCATGGCCTTCCTGCCGACGCTGGCGCTGCAGGTGCTGGGGCGCCCGCTGGCGTTGCCGC ACGTCGCCACATGGTGGTGCGGACAGGCAGCCGAGCGCGCCGAGGTGTGCGAGCATCTGGACGATCTCGTCCTCACCTCC GCCTTCGGCAATGCCATCCCCGGCCTGCCGCGCCGTTTTTCCGCCGTGGGCGCCGATCTTACGGCGGCCGAACGCAAGCG GATCGAGACCATCATGGCCCTGCGCGGCGGGGATCTGGTGGCGCAGGACATCGCCCGCATCTCCACCATGCCGGTGTGGA GCGGCGACAAGCTGGTGCCGCGCCCCTTCACCTTGCGTGTCTTCCTCGCCGCGACAGATGACGGCTGGGTGGTCATGCCC GGCGGCTTCTGCCGCATCTCGGAGAGCCGCGATGCCCGCGCCTTCTCCATGCAGCGGGGCGATCGCTCTGCGGACGTCTG GGTGCTCTCCACGGAGGAAGTGTCCTCCGCGACCCTCATGCCCAGCCCGGAGAATGTGCGCATCCGCCGTTCCTCCGGCA CGCTGCCGAGCCGGGCCGCGGATAATCTCTTCTGGCTCGGCCGCTATCTGGAGCGGGCGGAGGCTTCGCTGCGGCTGGTG CGGGCGCTGGTGGGGCGCCTGTCGGAAGTGGAATCCTCCTCCGGCCCGCTGGTGATGCGGCTCGTGAGCCTGCTGGCCAC CTGGGGCGCGGTGCCCCGCGATCTCGCGCGCGGCACGCCGGCGCGCTACGGCCTCGCGGCGCTCACCCGCAACGATCTGC CGGGCTCGCTGCCGCAACTGGTGCGCAGCGCCCGCGCCTCGGCGTCCGTCATCCGCGACCGCTTCTCGCCGGACGGCTGG CGGGCACTGCTCGATCTGGAAGCCTGCATCGAGGCGCCGCTGACCGGCAATGTCTCCGAGGCGGACGCCTATGAGCGGGC GGACGCGGCCCTGCGCATCATCGCCGCCTTCTCGGGCCTCGCCAGCGAGAACATGAACCGCCTCGCCGGCTGGCGTTTCC TGGAGATCGGCCGGCGCATCGAGCGTTCCATAGCCCTGCTGCGCTTCGCCCGCACGTTCGCCGAGCCGGCGGCGCCGCGT GGCGCGCTGAACGTGCTGCTCCAACTCGCCGACAGCCAGATCACCTATCGCACGCGCTATGTGATGCTGGAGGCGCGGGG GCCGGTGCTCGATCTGGTGCTGCTGGACCCGGACAATCCCCGCTCGCTGATGTTCCAGATCCAGCGCATCGCCGATCACC TGCGGGTGCTGCCCGGCCGCGATCCCGACCTGCCGCCCTCGCTCGCCGAGCGCCTCGTGGGGCGCATCCTCTCTGACCTC ATCGCCCATACGGCGGAGACCTTCGAGCTGAAGCATTTCGACGCCATGGAGGCCGACATGCTGAAACTCTCGGACGAGAT CGGCGCCCATTACTTCATCCAGGGTCCGGAAGAGGCCGTGTACTGGCCCGTGGCGACCTGA
Upstream 100 bases:
>100_bases GGACGGGACCGCAGGCAGAGCCGGCATTCAGGTTAAGCTCCCGTTTACCTCCGCAGCTTCAGGCAAGCGGAGGGGCGTCT AATGGCGGACCGCTCTCCCG
Downstream 100 bases:
>100_bases TATCCCTTCCACCGCTGTCCGGCGCACCGGAGGGACACCGGGCGGAGCAGCTTGGCACGAGGCCGCGCGGGAGGCGGTTC TGATGCTCTACGACATCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 846; Mature: 846
Protein sequence:
>846_residues MERGTRKGRRDGVSGAETRSIDFEQAAVESVLGGYETLPGVRDEMMDADGQPRPHWVAFLAELAELGPDGIRRRFSAADR YLRESGVFYRVYDDAGGNERPWSLSHIPLLLEKSDWQVLAEGLIERAELLEALLADLYGPGALVAGGALPAAAVAGSPEF LRPLVGVAPRGGRYLRFYAADVGRGPDGRWWVLSDRTQAPSGVGYALENRLAVTRALPDVSRTLRMERLASFFQNFRASL LKLDTTGEGRVGLLTPGSLNETYFEHALLARYLGFLLVEGEDLTVRGDAVNVRTVAGLKRIDVLLRRLDADFGDPLELNA HSRLGVPGLVHAVRQGGVALANALGSGLVEAPALMAFLPTLALQVLGRPLALPHVATWWCGQAAERAEVCEHLDDLVLTS AFGNAIPGLPRRFSAVGADLTAAERKRIETIMALRGGDLVAQDIARISTMPVWSGDKLVPRPFTLRVFLAATDDGWVVMP GGFCRISESRDARAFSMQRGDRSADVWVLSTEEVSSATLMPSPENVRIRRSSGTLPSRAADNLFWLGRYLERAEASLRLV RALVGRLSEVESSSGPLVMRLVSLLATWGAVPRDLARGTPARYGLAALTRNDLPGSLPQLVRSARASASVIRDRFSPDGW RALLDLEACIEAPLTGNVSEADAYERADAALRIIAAFSGLASENMNRLAGWRFLEIGRRIERSIALLRFARTFAEPAAPR GALNVLLQLADSQITYRTRYVMLEARGPVLDLVLLDPDNPRSLMFQIQRIADHLRVLPGRDPDLPPSLAERLVGRILSDL IAHTAETFELKHFDAMEADMLKLSDEIGAHYFIQGPEEAVYWPVAT
Sequences:
>Translated_846_residues MERGTRKGRRDGVSGAETRSIDFEQAAVESVLGGYETLPGVRDEMMDADGQPRPHWVAFLAELAELGPDGIRRRFSAADR YLRESGVFYRVYDDAGGNERPWSLSHIPLLLEKSDWQVLAEGLIERAELLEALLADLYGPGALVAGGALPAAAVAGSPEF LRPLVGVAPRGGRYLRFYAADVGRGPDGRWWVLSDRTQAPSGVGYALENRLAVTRALPDVSRTLRMERLASFFQNFRASL LKLDTTGEGRVGLLTPGSLNETYFEHALLARYLGFLLVEGEDLTVRGDAVNVRTVAGLKRIDVLLRRLDADFGDPLELNA HSRLGVPGLVHAVRQGGVALANALGSGLVEAPALMAFLPTLALQVLGRPLALPHVATWWCGQAAERAEVCEHLDDLVLTS AFGNAIPGLPRRFSAVGADLTAAERKRIETIMALRGGDLVAQDIARISTMPVWSGDKLVPRPFTLRVFLAATDDGWVVMP GGFCRISESRDARAFSMQRGDRSADVWVLSTEEVSSATLMPSPENVRIRRSSGTLPSRAADNLFWLGRYLERAEASLRLV RALVGRLSEVESSSGPLVMRLVSLLATWGAVPRDLARGTPARYGLAALTRNDLPGSLPQLVRSARASASVIRDRFSPDGW RALLDLEACIEAPLTGNVSEADAYERADAALRIIAAFSGLASENMNRLAGWRFLEIGRRIERSIALLRFARTFAEPAAPR GALNVLLQLADSQITYRTRYVMLEARGPVLDLVLLDPDNPRSLMFQIQRIADHLRVLPGRDPDLPPSLAERLVGRILSDL IAHTAETFELKHFDAMEADMLKLSDEIGAHYFIQGPEEAVYWPVAT >Mature_846_residues MERGTRKGRRDGVSGAETRSIDFEQAAVESVLGGYETLPGVRDEMMDADGQPRPHWVAFLAELAELGPDGIRRRFSAADR YLRESGVFYRVYDDAGGNERPWSLSHIPLLLEKSDWQVLAEGLIERAELLEALLADLYGPGALVAGGALPAAAVAGSPEF LRPLVGVAPRGGRYLRFYAADVGRGPDGRWWVLSDRTQAPSGVGYALENRLAVTRALPDVSRTLRMERLASFFQNFRASL LKLDTTGEGRVGLLTPGSLNETYFEHALLARYLGFLLVEGEDLTVRGDAVNVRTVAGLKRIDVLLRRLDADFGDPLELNA HSRLGVPGLVHAVRQGGVALANALGSGLVEAPALMAFLPTLALQVLGRPLALPHVATWWCGQAAERAEVCEHLDDLVLTS AFGNAIPGLPRRFSAVGADLTAAERKRIETIMALRGGDLVAQDIARISTMPVWSGDKLVPRPFTLRVFLAATDDGWVVMP GGFCRISESRDARAFSMQRGDRSADVWVLSTEEVSSATLMPSPENVRIRRSSGTLPSRAADNLFWLGRYLERAEASLRLV RALVGRLSEVESSSGPLVMRLVSLLATWGAVPRDLARGTPARYGLAALTRNDLPGSLPQLVRSARASASVIRDRFSPDGW RALLDLEACIEAPLTGNVSEADAYERADAALRIIAAFSGLASENMNRLAGWRFLEIGRRIERSIALLRFARTFAEPAAPR GALNVLLQLADSQITYRTRYVMLEARGPVLDLVLLDPDNPRSLMFQIQRIADHLRVLPGRDPDLPPSLAERLVGRILSDL IAHTAETFELKHFDAMEADMLKLSDEIGAHYFIQGPEEAVYWPVAT
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007296 - InterPro: IPR007297 - InterPro: IPR007302 [H]
Pfam domain/function: PF04168 DUF403; PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 92428; Mature: 92428
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERGTRKGRRDGVSGAETRSIDFEQAAVESVLGGYETLPGVRDEMMDADGQPRPHWVAFL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHCCCCCCCHHHHHHH AELAELGPDGIRRRFSAADRYLRESGVFYRVYDDAGGNERPWSLSHIPLLLEKSDWQVLA HHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHH EGLIERAELLEALLADLYGPGALVAGGALPAAAVAGSPEFLRPLVGVAPRGGRYLRFYAA HHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCHHHHHHHHCCCCCCCCEEEEEEE DVGRGPDGRWWVLSDRTQAPSGVGYALENRLAVTRALPDVSRTLRMERLASFFQNFRASL ECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LKLDTTGEGRVGLLTPGSLNETYFEHALLARYLGFLLVEGEDLTVRGDAVNVRTVAGLKR EEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCEEEECCCCEEEECCCEEHHHHHHHHH IDVLLRRLDADFGDPLELNAHSRLGVPGLVHAVRQGGVALANALGSGLVEAPALMAFLPT HHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHH LALQVLGRPLALPHVATWWCGQAAERAEVCEHLDDLVLTSAFGNAIPGLPRRFSAVGADL HHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCH TAAERKRIETIMALRGGDLVAQDIARISTMPVWSGDKLVPRPFTLRVFLAATDDGWVVMP HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEC GGFCRISESRDARAFSMQRGDRSADVWVLSTEEVSSATLMPSPENVRIRRSSGTLPSRAA CCEEEECCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHH DNLFWLGRYLERAEASLRLVRALVGRLSEVESSSGPLVMRLVSLLATWGAVPRDLARGTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCCC ARYGLAALTRNDLPGSLPQLVRSARASASVIRDRFSPDGWRALLDLEACIEAPLTGNVSE CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCH ADAYERADAALRIIAAFSGLASENMNRLAGWRFLEIGRRIERSIALLRFARTFAEPAAPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH GALNVLLQLADSQITYRTRYVMLEARGPVLDLVLLDPDNPRSLMFQIQRIADHLRVLPGR HHHHHHHHHHCCCEEEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCC DPDLPPSLAERLVGRILSDLIAHTAETFELKHFDAMEADMLKLSDEIGAHYFIQGPEEAV CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHCCHHHHHHHHHHHHHCCEEEEECCCCCE YWPVAT EECCCC >Mature Secondary Structure MERGTRKGRRDGVSGAETRSIDFEQAAVESVLGGYETLPGVRDEMMDADGQPRPHWVAFL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHCCCCCCCHHHHHHH AELAELGPDGIRRRFSAADRYLRESGVFYRVYDDAGGNERPWSLSHIPLLLEKSDWQVLA HHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHH EGLIERAELLEALLADLYGPGALVAGGALPAAAVAGSPEFLRPLVGVAPRGGRYLRFYAA HHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCHHHHHHHHCCCCCCCCEEEEEEE DVGRGPDGRWWVLSDRTQAPSGVGYALENRLAVTRALPDVSRTLRMERLASFFQNFRASL ECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LKLDTTGEGRVGLLTPGSLNETYFEHALLARYLGFLLVEGEDLTVRGDAVNVRTVAGLKR EEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCEEEECCCCEEEECCCEEHHHHHHHHH IDVLLRRLDADFGDPLELNAHSRLGVPGLVHAVRQGGVALANALGSGLVEAPALMAFLPT HHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHH LALQVLGRPLALPHVATWWCGQAAERAEVCEHLDDLVLTSAFGNAIPGLPRRFSAVGADL HHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCH TAAERKRIETIMALRGGDLVAQDIARISTMPVWSGDKLVPRPFTLRVFLAATDDGWVVMP HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEC GGFCRISESRDARAFSMQRGDRSADVWVLSTEEVSSATLMPSPENVRIRRSSGTLPSRAA CCEEEECCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHH DNLFWLGRYLERAEASLRLVRALVGRLSEVESSSGPLVMRLVSLLATWGAVPRDLARGTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCCC ARYGLAALTRNDLPGSLPQLVRSARASASVIRDRFSPDGWRALLDLEACIEAPLTGNVSE CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCH ADAYERADAALRIIAAFSGLASENMNRLAGWRFLEIGRRIERSIALLRFARTFAEPAAPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH GALNVLLQLADSQITYRTRYVMLEARGPVLDLVLLDPDNPRSLMFQIQRIADHLRVLPGR HHHHHHHHHHCCCEEEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCC DPDLPPSLAERLVGRILSDLIAHTAETFELKHFDAMEADMLKLSDEIGAHYFIQGPEEAV CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHCCHHHHHHHHHHHHHCCEEEEECCCCCE YWPVAT EECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]