| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is algJ [H]
Identifier: 158424845
GI number: 158424845
Start: 3689141
End: 3690112
Strand: Direct
Name: algJ [H]
Synonym: AZC_3221
Alternate gene names: 158424845
Gene position: 3689141-3690112 (Clockwise)
Preceding gene: 158424844
Following gene: 158424846
Centisome position: 68.7
GC content: 66.26
Gene sequence:
>972_bases TTGAACCGCCGCACTGTCCTCAGCCTCGCCGCCGCACTCGCCGGCGCGAGCCTGCTGGCACCGGCCGCCAAGGCGCAGGA AAACGTGATCATCATGGGCAAGAACGGCTGGCTGTTTCCCGGCTGGGAGAGCCTGACGGATGCGGACAAGCCGGGCATCG AGGGAGTGATCGGGCTCATCAAGGATGCACGCGACCGGCTCAATGCCCGAAACATCAAGCTCATCACCATGGTGGTGCCG CTGAAGGCCAGCTTCTATCAAGACCGTCTGCCCGACGGCACGCGCCTGACGCCTGACGTCGGCGCGCGCTACGACTTCGT CCTCTCCCAGCTCAAGGCCGCAGGTGTCGATACCGTTGATCTGCGTCCGGTGCTCAAGAGCGTGGAGACGGGCCGGCAGA CGGCCTTCTACCGCGCCGATTACCATTGGACCGCCTGGTCTGCCGAGGCGGCGGCGGACGAGGTCGCCAAGGTCATCAAG GCCGGCGTCAGACTGTCCGGCAGCGCCGGCACGGGAGACAAGCTCGGCGAGTGGGTCACCCAGCGCAACATGGGAGATCT CGCCCAGCGCTTCCTTTCGCCTGAGCAGCAGAAGCAGGTCGGTCCCGACCTCTACACGGTACGGACGCCTCCGGAGGCCA AGAAGACCCTGCTGGACGCCGCGCCCGCCCCCGTCCATGTGGTGGGCAACAGTTTCGTGCAGCCCTACCTCGGCTTCCCG CAGCGCCTCTCGAACGATCTCGACAGGCCCGTGTCGCTCACCTGGAATCCCGGCAACGTGGGGCCCTGGTTCACCTTCCT GCAATATGTGACTTCGCCGGATTTCGCCAAGCAGCCGCCGCAGGTCGTCGTCTGGCAGTTCAACGAGGGGGCGTTCCATA GCGGCCCGGCCGCCAGCGCACAGTGGGATTCCACATCCCTGATGCAGCCCCAGGTCTGGCGTGACCGCATGGCGGCCGCC ATCGGCAAGTGA
Upstream 100 bases:
>100_bases GTGAAGCTGGTGATATGGGAATGGCCCGCCCGCTCCCTCACGCTTCCGCTCACTGCGGCGGAGCGCCGCTACATGGAGAT CCATGCCCATGACTGACACG
Downstream 100 bases:
>100_bases GGGCGCCCAAAATCTTTCGGATCCGTAAATATCCGGACATGTCATCTGTCCTGCGCAGGTGATGGAAAAGTAAAAAGCCG AGGCCCGAGTTAACCTTAAC
Product: twin-arginine translocation pathway signal precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MNRRTVLSLAAALAGASLLAPAAKAQENVIIMGKNGWLFPGWESLTDADKPGIEGVIGLIKDARDRLNARNIKLITMVVP LKASFYQDRLPDGTRLTPDVGARYDFVLSQLKAAGVDTVDLRPVLKSVETGRQTAFYRADYHWTAWSAEAAADEVAKVIK AGVRLSGSAGTGDKLGEWVTQRNMGDLAQRFLSPEQQKQVGPDLYTVRTPPEAKKTLLDAAPAPVHVVGNSFVQPYLGFP QRLSNDLDRPVSLTWNPGNVGPWFTFLQYVTSPDFAKQPPQVVVWQFNEGAFHSGPAASAQWDSTSLMQPQVWRDRMAAA IGK
Sequences:
>Translated_323_residues MNRRTVLSLAAALAGASLLAPAAKAQENVIIMGKNGWLFPGWESLTDADKPGIEGVIGLIKDARDRLNARNIKLITMVVP LKASFYQDRLPDGTRLTPDVGARYDFVLSQLKAAGVDTVDLRPVLKSVETGRQTAFYRADYHWTAWSAEAAADEVAKVIK AGVRLSGSAGTGDKLGEWVTQRNMGDLAQRFLSPEQQKQVGPDLYTVRTPPEAKKTLLDAAPAPVHVVGNSFVQPYLGFP QRLSNDLDRPVSLTWNPGNVGPWFTFLQYVTSPDFAKQPPQVVVWQFNEGAFHSGPAASAQWDSTSLMQPQVWRDRMAAA IGK >Mature_323_residues MNRRTVLSLAAALAGASLLAPAAKAQENVIIMGKNGWLFPGWESLTDADKPGIEGVIGLIKDARDRLNARNIKLITMVVP LKASFYQDRLPDGTRLTPDVGARYDFVLSQLKAAGVDTVDLRPVLKSVETGRQTAFYRADYHWTAWSAEAAADEVAKVIK AGVRLSGSAGTGDKLGEWVTQRNMGDLAQRFLSPEQQKQVGPDLYTVRTPPEAKKTLLDAAPAPVHVVGNSFVQPYLGFP QRLSNDLDRPVSLTWNPGNVGPWFTFLQYVTSPDFAKQPPQVVVWQFNEGAFHSGPAASAQWDSTSLMQPQVWRDRMAAA IGK
Specific function: Together with AlgI and AlgF, forms an inner membrane complex which probably interacts with the alginate polymerization- transport complex and adds acetyl groups at the O-2 and O-3 positions of polymannuronic acid. Acetylation of alginate is important for
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side. Periplasm (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlgJ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35283; Mature: 35283
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRTVLSLAAALAGASLLAPAAKAQENVIIMGKNGWLFPGWESLTDADKPGIEGVIGLI CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCCCCCHHHHHHHH KDARDRLNARNIKLITMVVPLKASFYQDRLPDGTRLTPDVGARYDFVLSQLKAAGVDTVD HHHHHHCCCCCEEEEEEEECHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH LRPVLKSVETGRQTAFYRADYHWTAWSAEAAADEVAKVIKAGVRLSGSAGTGDKLGEWVT HHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHH QRNMGDLAQRFLSPEQQKQVGPDLYTVRTPPEAKKTLLDAAPAPVHVVGNSFVQPYLGFP HCCHHHHHHHHCCCHHHHHCCCCEEEECCCCHHHHHHHHCCCCCEEECCCHHHHHHCCCH QRLSNDLDRPVSLTWNPGNVGPWFTFLQYVTSPDFAKQPPQVVVWQFNEGAFHSGPAASA HHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCC QWDSTSLMQPQVWRDRMAAAIGK CCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNRRTVLSLAAALAGASLLAPAAKAQENVIIMGKNGWLFPGWESLTDADKPGIEGVIGLI CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCCCCCHHHHHHHH KDARDRLNARNIKLITMVVPLKASFYQDRLPDGTRLTPDVGARYDFVLSQLKAAGVDTVD HHHHHHCCCCCEEEEEEEECHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH LRPVLKSVETGRQTAFYRADYHWTAWSAEAAADEVAKVIKAGVRLSGSAGTGDKLGEWVT HHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHH QRNMGDLAQRFLSPEQQKQVGPDLYTVRTPPEAKKTLLDAAPAPVHVVGNSFVQPYLGFP HCCHHHHHHHHCCCHHHHHCCCCEEEECCCCHHHHHHHHCCCCCEEECCCHHHHHHCCCH QRLSNDLDRPVSLTWNPGNVGPWFTFLQYVTSPDFAKQPPQVVVWQFNEGAFHSGPAASA HHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCC QWDSTSLMQPQVWRDRMAAAIGK CCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12775688 [H]