Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is yhcQ [C]

Identifier: 158424829

GI number: 158424829

Start: 3664682

End: 3666013

Strand: Direct

Name: yhcQ [C]

Synonym: AZC_3205

Alternate gene names: 158424829

Gene position: 3664682-3666013 (Clockwise)

Preceding gene: 158424828

Following gene: 158424830

Centisome position: 68.25

GC content: 70.65

Gene sequence:

>1332_bases
TTGCCTTTTGCGCGCGCCTCGCGCACCAATGCCGGGAATCTGGAACATCCAAGACTGGCCCCGATGAGCGCTCCGGCCCC
GGCCTTCCGCAATACGAGCCCGGATCAGCTCGACCTCATGGTCCGCGTGTCTTCGCCCATGGGCTGGCTGGTGCTGGCGG
TGTTCATCTGCGTGGTGCTCGGCGGACTTGCCTGGTCGATCCTCGGCACGGCGCCGATCAAGGTGGCGGGCACAGGCGTG
CTTCAGGGCACAGGCGGCGTCCTGCTCGTGTCGTCGCCGGGCAACGGGCCGGTCTCGGACCTCAAGGTGGCCGTGGGGGC
GCAGGTGCATGCCGGCGAGATCGTCGCCGTGCTGTCCGATCCCGTGCTGGACGCCCGCGCCCAGACCATCACCGCGCGCC
TTGCCCAGTTGCAGGAGGAACAGCGCAAGCTCGCAGCGTTTCAGGCGCGCGAGAAGGAGGTGCGCGCCCGCGCCGATGCC
CAGCGCAAGGAAGCGCTTGAAAACACCATCCGCCAGGCCCGCGAGCGCGAGGCCGCCCTCACCCAGGTGCTCGCCAACCA
GCGGGATCTGTTGAGTAGGGGCCTCGCCACCCGCGACCGCGTGCTGATCACCGAGAACGACCGCGAGCAGGCCCGCCGGG
ATGCGGCGGATGCGGCCAACGCCATCAATGCCCTCGGCGTCGAGGCGGACGAGCGCGGCATCCGTGCCGAGCGCGATATG
CTCGATCTGTCCGCCCGCCTCAGCCAGAGCCGGCAGGAACTGGCGGAAGTCGAGGCCGAACGGGCGGCACGCACCCTGGT
GCGCGCGCCGGGCGATGGCCGCATCATCGAACTGTCGGTGGCGCTGGGCGACCGGGTGAGCGCCGGCAGCAGCCTCATGC
GCCTCGTCCCCGAAGTGCGGGGCGCAGCGGGCGAGGGCCTCGTGGGCATCCTTTATGTGCCCTCCAGCGAGGGCAAGAAG
GTGCGGCCCGGCATGCCGGTGCAGGTGGTGCCCTCCACCGTGAACATGGAGCGCGACGGCTTCATCCGGGGCGAGGTCAT
CCGCGTGTCCGAGACGCCGGCGACCCGCGAGGCGGTGCAGCAGACCCTGAAGAACGAGGCCTTCGTCGCCCGCCTGCTCG
CCAATGGCCCGCCCTTCGAAGTGCAGGTGGCCTTGAAGCGGGATCCCTCGAGCGTCAGCGGCTTTGCCTGGTCCTCCGAG
CTTGGCGCCACGCGGCCGGTGGAAGCGGGCACGGTGGTCTCCGGCAGCGTGGTGGTGGAGCGCGTGCGCATCATCACCCT
GGTCTTCCCGGCCTTCGAGCGCCTGTTCCACGCCCTCGGGGGCGGCCGGTGA

Upstream 100 bases:

>100_bases
GCTTCTGGCGCTGGCTGCCGCTTTCGGAGAGGTTCCCCGCTCGTCATCATAAGACCCGTCCGGAGGCGAAGGGGACGCAG
CGCCTCGCCGTTTCGTCGGC

Downstream 100 bases:

>100_bases
GCGAGCCCCGGCGCGCCGGACGGCCCACGGCGAAGCTCAGGCGCGTGCCGTCCATCTTCCAGATGGAGGCGGTGGAATGC
GGCGCGGCGTCGCTCGCCAT

Product: membrane-fusion protein

Products: NA

Alternate protein names: Membrane-Fusion Protein; Secretion Protein HlyD Family Protein; Type I Secretion Adaptor Protein; Chromosome Segregation ATPase-Like Protein

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MPFARASRTNAGNLEHPRLAPMSAPAPAFRNTSPDQLDLMVRVSSPMGWLVLAVFICVVLGGLAWSILGTAPIKVAGTGV
LQGTGGVLLVSSPGNGPVSDLKVAVGAQVHAGEIVAVLSDPVLDARAQTITARLAQLQEEQRKLAAFQAREKEVRARADA
QRKEALENTIRQAREREAALTQVLANQRDLLSRGLATRDRVLITENDREQARRDAADAANAINALGVEADERGIRAERDM
LDLSARLSQSRQELAEVEAERAARTLVRAPGDGRIIELSVALGDRVSAGSSLMRLVPEVRGAAGEGLVGILYVPSSEGKK
VRPGMPVQVVPSTVNMERDGFIRGEVIRVSETPATREAVQQTLKNEAFVARLLANGPPFEVQVALKRDPSSVSGFAWSSE
LGATRPVEAGTVVSGSVVVERVRIITLVFPAFERLFHALGGGR

Sequences:

>Translated_443_residues
MPFARASRTNAGNLEHPRLAPMSAPAPAFRNTSPDQLDLMVRVSSPMGWLVLAVFICVVLGGLAWSILGTAPIKVAGTGV
LQGTGGVLLVSSPGNGPVSDLKVAVGAQVHAGEIVAVLSDPVLDARAQTITARLAQLQEEQRKLAAFQAREKEVRARADA
QRKEALENTIRQAREREAALTQVLANQRDLLSRGLATRDRVLITENDREQARRDAADAANAINALGVEADERGIRAERDM
LDLSARLSQSRQELAEVEAERAARTLVRAPGDGRIIELSVALGDRVSAGSSLMRLVPEVRGAAGEGLVGILYVPSSEGKK
VRPGMPVQVVPSTVNMERDGFIRGEVIRVSETPATREAVQQTLKNEAFVARLLANGPPFEVQVALKRDPSSVSGFAWSSE
LGATRPVEAGTVVSGSVVVERVRIITLVFPAFERLFHALGGGR
>Mature_442_residues
PFARASRTNAGNLEHPRLAPMSAPAPAFRNTSPDQLDLMVRVSSPMGWLVLAVFICVVLGGLAWSILGTAPIKVAGTGVL
QGTGGVLLVSSPGNGPVSDLKVAVGAQVHAGEIVAVLSDPVLDARAQTITARLAQLQEEQRKLAAFQAREKEVRARADAQ
RKEALENTIRQAREREAALTQVLANQRDLLSRGLATRDRVLITENDREQARRDAADAANAINALGVEADERGIRAERDML
DLSARLSQSRQELAEVEAERAARTLVRAPGDGRIIELSVALGDRVSAGSSLMRLVPEVRGAAGEGLVGILYVPSSEGKKV
RPGMPVQVVPSTVNMERDGFIRGEVIRVSETPATREAVQQTLKNEAFVARLLANGPPFEVQVALKRDPSSVSGFAWSSEL
GATRPVEAGTVVSGSVVVERVRIITLVFPAFERLFHALGGGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47285; Mature: 47154

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFARASRTNAGNLEHPRLAPMSAPAPAFRNTSPDQLDLMVRVSSPMGWLVLAVFICVVL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
GGLAWSILGTAPIKVAGTGVLQGTGGVLLVSSPGNGPVSDLKVAVGAQVHAGEIVAVLSD
HHHHHHHHCCCCEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHCCEECCCCEEEECCC
PVLDARAQTITARLAQLQEEQRKLAAFQAREKEVRARADAQRKEALENTIRQAREREAAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQVLANQRDLLSRGLATRDRVLITENDREQARRDAADAANAINALGVEADERGIRAERDM
HHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHH
LDLSARLSQSRQELAEVEAERAARTLVRAPGDGRIIELSVALGDRVSAGSSLMRLVPEVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHC
GAAGEGLVGILYVPSSEGKKVRPGMPVQVVPSTVNMERDGFIRGEVIRVSETPATREAVQ
CCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCEECEEEEEECCCHHHHHHH
QTLKNEAFVARLLANGPPFEVQVALKRDPSSVSGFAWSSELGATRPVEAGTVVSGSVVVE
HHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEECCCCCCCCCCCCCCEEEHHHHHH
RVRIITLVFPAFERLFHALGGGR
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PFARASRTNAGNLEHPRLAPMSAPAPAFRNTSPDQLDLMVRVSSPMGWLVLAVFICVVL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
GGLAWSILGTAPIKVAGTGVLQGTGGVLLVSSPGNGPVSDLKVAVGAQVHAGEIVAVLSD
HHHHHHHHCCCCEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHCCEECCCCEEEECCC
PVLDARAQTITARLAQLQEEQRKLAAFQAREKEVRARADAQRKEALENTIRQAREREAAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQVLANQRDLLSRGLATRDRVLITENDREQARRDAADAANAINALGVEADERGIRAERDM
HHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHH
LDLSARLSQSRQELAEVEAERAARTLVRAPGDGRIIELSVALGDRVSAGSSLMRLVPEVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHC
GAAGEGLVGILYVPSSEGKKVRPGMPVQVVPSTVNMERDGFIRGEVIRVSETPATREAVQ
CCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCEECEEEEEECCCHHHHHHH
QTLKNEAFVARLLANGPPFEVQVALKRDPSSVSGFAWSSELGATRPVEAGTVVSGSVVVE
HHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEECCCCCCCCCCCCCCEEEHHHHHH
RVRIITLVFPAFERLFHALGGGR
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA