Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is 158424828

Identifier: 158424828

GI number: 158424828

Start: 3663257

End: 3664633

Strand: Direct

Name: 158424828

Synonym: AZC_3204

Alternate gene names: NA

Gene position: 3663257-3664633 (Clockwise)

Preceding gene: 158424827

Following gene: 158424829

Centisome position: 68.22

GC content: 71.17

Gene sequence:

>1377_bases
ATGAGCACTCCCACCTTCTCGCCCGCCGCCGAACCTGCGCTGTGGGCGCGGTCTGCCAGTGAACTGAACGCGCTCTACGC
CGCCGGTCAGGCAACCCCCGAGGACACCCTCACGTCCGTGCTGGAGCGGCTGGAGGCGGTGAACCCAGCGCTCAATGCCG
TGATCGCCCTCGATCACGCGGGCGCCCTCGCAGCGGCCAGGGCGAGCACGGAGCGCTGGCGGGCCGGCACACCGCTCTCG
CCGCTCGATGGCGTGCCGGTGAGCGTGAAGGACAACATCCTCCAGCAGGGCCTGCCCGCCACATGGGGCAGCCGGCTGTA
CCGGGATTTCGTGCCGGAGCGCGACGAGACGCCGGTGGCCCGCCTGAGGGCGGCGGGCGCCCTGCTGTTCGGCAAGACCA
ACGTGCCGGAATTCACCCTCCAGGGCTATACGGACAACCTGCTCTTCGGCGTGACCGGCAATCCCTTCGACCCCACCCTG
ACCCCCGGCGGCTCCAGCGGCGGTGCGGTGGCAGCGGTCGCAGCCGGCATCGGCCCCATCGCGCTCGGCACCGACGGCGG
CGGCTCCATCCGCCGGCCGGCGGGCTATGCCGGACTGTTCGGCCTCAAGCCCTCGCGCGGTCTGGTGCCGCGCGCCCACG
GCTTTCCCACCATTCTCCATGACTTCGAGGTCGCAGGCCCGCTCGCGCGCACGGTGGCAGACATCCAGCTCACCCTCACC
GTCATTGCGGACGGCTTTGCACCCGCCGCTGTCACGGCTCCCCTGCGTATTCTCTTCGCGCCCACGTTCGGCACGGCACC
GGTGGATCCGGAGATCGCGGCCAGCCTCGAAGAGGCCGCCCGGCAGTTCGAAGCCATGGGCCACAGTGTCGAACGGGCGG
AGCCTTTCCTTCTCGCAGAGCCCATGCTCGACATCTGGCCGGTGGTCAGCCAGACCGCCGCCGCAGCGGTGATGGAAGAG
CATCCGGGACAGGAGCACCTCATCGCGCCGGCACTGGCGGAGATGGCGCGGCAGGGCGCAGCGCGATCGGCCACGGAGTA
CCTCGGCGCCCTGAACCGGATCACCGCCATGGGCCGGGAGTTCGACGCGCTCTTCGCCCGCCATGACATCCTGCTGACGC
CGGCGGCGGCGGCCCTGCCCTGGCCCGCCCACGAGCCCTATCCCACGCAGATCGCCGGCCGACCGGTGGGGCCGCGCGGG
CATGCGGTCTTCACGCCCTTTGCCAATGTGCTGGGTCTGCCCGGCCTCAGCATTCCCGTCCGGCCCTCGGCCACCGGCCT
GCCCATCGGCGCACAGATCGTCGGCCCGCACGGTTCGGATGCCCGGCTTCTGGCGCTGGCTGCCGCTTTCGGAGAGGTTC
CCCGCTCGTCATCATAA

Upstream 100 bases:

>100_bases
TGATCGCGTCGGTGACGGGTGATCCCGCCATCTTCGTCTCGGGCGGCACCGAGCATCAGTGCGCGCCCGGCGCCGCACCC
ATCGCGGCGATCGTGCGCGC

Downstream 100 bases:

>100_bases
GACCCGTCCGGAGGCGAAGGGGACGCAGCGCCTCGCCGTTTCGTCGGCTTGCCTTTTGCGCGCGCCTCGCGCACCAATGC
CGGGAATCTGGAACATCCAA

Product: glutamyl-tRNA(Gln) amidotransferase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MSTPTFSPAAEPALWARSASELNALYAAGQATPEDTLTSVLERLEAVNPALNAVIALDHAGALAAARASTERWRAGTPLS
PLDGVPVSVKDNILQQGLPATWGSRLYRDFVPERDETPVARLRAAGALLFGKTNVPEFTLQGYTDNLLFGVTGNPFDPTL
TPGGSSGGAVAAVAAGIGPIALGTDGGGSIRRPAGYAGLFGLKPSRGLVPRAHGFPTILHDFEVAGPLARTVADIQLTLT
VIADGFAPAAVTAPLRILFAPTFGTAPVDPEIAASLEEAARQFEAMGHSVERAEPFLLAEPMLDIWPVVSQTAAAAVMEE
HPGQEHLIAPALAEMARQGAARSATEYLGALNRITAMGREFDALFARHDILLTPAAAALPWPAHEPYPTQIAGRPVGPRG
HAVFTPFANVLGLPGLSIPVRPSATGLPIGAQIVGPHGSDARLLALAAAFGEVPRSSS

Sequences:

>Translated_458_residues
MSTPTFSPAAEPALWARSASELNALYAAGQATPEDTLTSVLERLEAVNPALNAVIALDHAGALAAARASTERWRAGTPLS
PLDGVPVSVKDNILQQGLPATWGSRLYRDFVPERDETPVARLRAAGALLFGKTNVPEFTLQGYTDNLLFGVTGNPFDPTL
TPGGSSGGAVAAVAAGIGPIALGTDGGGSIRRPAGYAGLFGLKPSRGLVPRAHGFPTILHDFEVAGPLARTVADIQLTLT
VIADGFAPAAVTAPLRILFAPTFGTAPVDPEIAASLEEAARQFEAMGHSVERAEPFLLAEPMLDIWPVVSQTAAAAVMEE
HPGQEHLIAPALAEMARQGAARSATEYLGALNRITAMGREFDALFARHDILLTPAAAALPWPAHEPYPTQIAGRPVGPRG
HAVFTPFANVLGLPGLSIPVRPSATGLPIGAQIVGPHGSDARLLALAAAFGEVPRSSS
>Mature_457_residues
STPTFSPAAEPALWARSASELNALYAAGQATPEDTLTSVLERLEAVNPALNAVIALDHAGALAAARASTERWRAGTPLSP
LDGVPVSVKDNILQQGLPATWGSRLYRDFVPERDETPVARLRAAGALLFGKTNVPEFTLQGYTDNLLFGVTGNPFDPTLT
PGGSSGGAVAAVAAGIGPIALGTDGGGSIRRPAGYAGLFGLKPSRGLVPRAHGFPTILHDFEVAGPLARTVADIQLTLTV
IADGFAPAAVTAPLRILFAPTFGTAPVDPEIAASLEEAARQFEAMGHSVERAEPFLLAEPMLDIWPVVSQTAAAAVMEEH
PGQEHLIAPALAEMARQGAARSATEYLGALNRITAMGREFDALFARHDILLTPAAAALPWPAHEPYPTQIAGRPVGPRGH
AVFTPFANVLGLPGLSIPVRPSATGLPIGAQIVGPHGSDARLLALAAAFGEVPRSSS

Specific function: Unknown

COG id: COG0154

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family [H]

Homologues:

Organism=Homo sapiens, GI222831590, Length=502, Percent_Identity=29.8804780876494, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI195972892, Length=493, Percent_Identity=24.9492900608519, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI166795287, Length=235, Percent_Identity=33.6170212765957, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17537465, Length=483, Percent_Identity=25.2587991718427, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17543272, Length=409, Percent_Identity=26.6503667481663, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17556264, Length=184, Percent_Identity=35.3260869565217, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17538252, Length=132, Percent_Identity=40.9090909090909, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71990152, Length=155, Percent_Identity=37.4193548387097, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17538254, Length=239, Percent_Identity=30.9623430962343, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17556276, Length=293, Percent_Identity=29.3515358361775, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17556278, Length=338, Percent_Identity=28.1065088757396, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323950, Length=476, Percent_Identity=24.7899159663866, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6319685, Length=392, Percent_Identity=27.2959183673469, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6320448, Length=180, Percent_Identity=37.7777777777778, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24648113, Length=502, Percent_Identity=28.2868525896414, Blast_Score=152, Evalue=5e-37,
Organism=Drosophila melanogaster, GI24648435, Length=469, Percent_Identity=26.4392324093817, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24648437, Length=469, Percent_Identity=26.4392324093817, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI45550774, Length=469, Percent_Identity=26.4392324093817, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI161078093, Length=502, Percent_Identity=28.2868525896414, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24652985, Length=491, Percent_Identity=27.0875763747454, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI19922090, Length=491, Percent_Identity=27.0875763747454, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24652981, Length=491, Percent_Identity=27.0875763747454, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24652983, Length=491, Percent_Identity=27.0875763747454, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI21356731, Length=465, Percent_Identity=28.6021505376344, Blast_Score=118, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24644968, Length=492, Percent_Identity=25.4065040650407, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24648441, Length=402, Percent_Identity=26.865671641791, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24648439, Length=402, Percent_Identity=26.865671641791, Blast_Score=114, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000120
- InterPro:   IPR020556 [H]

Pfam domain/function: PF01425 Amidase [H]

EC number: =3.5.1.4 [H]

Molecular weight: Translated: 47406; Mature: 47275

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPTFSPAAEPALWARSASELNALYAAGQATPEDTLTSVLERLEAVNPALNAVIALDHA
CCCCCCCCCCCCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHEEEEECCC
GALAAARASTERWRAGTPLSPLDGVPVSVKDNILQQGLPATWGSRLYRDFVPERDETPVA
CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH
RLRAAGALLFGKTNVPEFTLQGYTDNLLFGVTGNPFDPTLTPGGSSGGAVAAVAAGIGPI
HHHHHCEEEECCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCE
ALGTDGGGSIRRPAGYAGLFGLKPSRGLVPRAHGFPTILHDFEVAGPLARTVADIQLTLT
EEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEE
VIADGFAPAAVTAPLRILFAPTFGTAPVDPEIAASLEEAARQFEAMGHSVERAEPFLLAE
EEECCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEC
PMLDIWPVVSQTAAAAVMEEHPGQEHLIAPALAEMARQGAARSATEYLGALNRITAMGRE
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCH
FDALFARHDILLTPAAAALPWPAHEPYPTQIAGRPVGPRGHAVFTPFANVLGLPGLSIPV
HHHHHHHCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCCCC
RPSATGLPIGAQIVGPHGSDARLLALAAAFGEVPRSSS
CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STPTFSPAAEPALWARSASELNALYAAGQATPEDTLTSVLERLEAVNPALNAVIALDHA
CCCCCCCCCCCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHEEEEECCC
GALAAARASTERWRAGTPLSPLDGVPVSVKDNILQQGLPATWGSRLYRDFVPERDETPVA
CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH
RLRAAGALLFGKTNVPEFTLQGYTDNLLFGVTGNPFDPTLTPGGSSGGAVAAVAAGIGPI
HHHHHCEEEECCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCE
ALGTDGGGSIRRPAGYAGLFGLKPSRGLVPRAHGFPTILHDFEVAGPLARTVADIQLTLT
EEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEE
VIADGFAPAAVTAPLRILFAPTFGTAPVDPEIAASLEEAARQFEAMGHSVERAEPFLLAE
EEECCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEC
PMLDIWPVVSQTAAAAVMEEHPGQEHLIAPALAEMARQGAARSATEYLGALNRITAMGRE
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCH
FDALFARHDILLTPAAAALPWPAHEPYPTQIAGRPVGPRGHAVFTPFANVLGLPGLSIPV
HHHHHHHCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCCCC
RPSATGLPIGAQIVGPHGSDARLLALAAAFGEVPRSSS
CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]