| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424828
Identifier: 158424828
GI number: 158424828
Start: 3663257
End: 3664633
Strand: Direct
Name: 158424828
Synonym: AZC_3204
Alternate gene names: NA
Gene position: 3663257-3664633 (Clockwise)
Preceding gene: 158424827
Following gene: 158424829
Centisome position: 68.22
GC content: 71.17
Gene sequence:
>1377_bases ATGAGCACTCCCACCTTCTCGCCCGCCGCCGAACCTGCGCTGTGGGCGCGGTCTGCCAGTGAACTGAACGCGCTCTACGC CGCCGGTCAGGCAACCCCCGAGGACACCCTCACGTCCGTGCTGGAGCGGCTGGAGGCGGTGAACCCAGCGCTCAATGCCG TGATCGCCCTCGATCACGCGGGCGCCCTCGCAGCGGCCAGGGCGAGCACGGAGCGCTGGCGGGCCGGCACACCGCTCTCG CCGCTCGATGGCGTGCCGGTGAGCGTGAAGGACAACATCCTCCAGCAGGGCCTGCCCGCCACATGGGGCAGCCGGCTGTA CCGGGATTTCGTGCCGGAGCGCGACGAGACGCCGGTGGCCCGCCTGAGGGCGGCGGGCGCCCTGCTGTTCGGCAAGACCA ACGTGCCGGAATTCACCCTCCAGGGCTATACGGACAACCTGCTCTTCGGCGTGACCGGCAATCCCTTCGACCCCACCCTG ACCCCCGGCGGCTCCAGCGGCGGTGCGGTGGCAGCGGTCGCAGCCGGCATCGGCCCCATCGCGCTCGGCACCGACGGCGG CGGCTCCATCCGCCGGCCGGCGGGCTATGCCGGACTGTTCGGCCTCAAGCCCTCGCGCGGTCTGGTGCCGCGCGCCCACG GCTTTCCCACCATTCTCCATGACTTCGAGGTCGCAGGCCCGCTCGCGCGCACGGTGGCAGACATCCAGCTCACCCTCACC GTCATTGCGGACGGCTTTGCACCCGCCGCTGTCACGGCTCCCCTGCGTATTCTCTTCGCGCCCACGTTCGGCACGGCACC GGTGGATCCGGAGATCGCGGCCAGCCTCGAAGAGGCCGCCCGGCAGTTCGAAGCCATGGGCCACAGTGTCGAACGGGCGG AGCCTTTCCTTCTCGCAGAGCCCATGCTCGACATCTGGCCGGTGGTCAGCCAGACCGCCGCCGCAGCGGTGATGGAAGAG CATCCGGGACAGGAGCACCTCATCGCGCCGGCACTGGCGGAGATGGCGCGGCAGGGCGCAGCGCGATCGGCCACGGAGTA CCTCGGCGCCCTGAACCGGATCACCGCCATGGGCCGGGAGTTCGACGCGCTCTTCGCCCGCCATGACATCCTGCTGACGC CGGCGGCGGCGGCCCTGCCCTGGCCCGCCCACGAGCCCTATCCCACGCAGATCGCCGGCCGACCGGTGGGGCCGCGCGGG CATGCGGTCTTCACGCCCTTTGCCAATGTGCTGGGTCTGCCCGGCCTCAGCATTCCCGTCCGGCCCTCGGCCACCGGCCT GCCCATCGGCGCACAGATCGTCGGCCCGCACGGTTCGGATGCCCGGCTTCTGGCGCTGGCTGCCGCTTTCGGAGAGGTTC CCCGCTCGTCATCATAA
Upstream 100 bases:
>100_bases TGATCGCGTCGGTGACGGGTGATCCCGCCATCTTCGTCTCGGGCGGCACCGAGCATCAGTGCGCGCCCGGCGCCGCACCC ATCGCGGCGATCGTGCGCGC
Downstream 100 bases:
>100_bases GACCCGTCCGGAGGCGAAGGGGACGCAGCGCCTCGCCGTTTCGTCGGCTTGCCTTTTGCGCGCGCCTCGCGCACCAATGC CGGGAATCTGGAACATCCAA
Product: glutamyl-tRNA(Gln) amidotransferase subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MSTPTFSPAAEPALWARSASELNALYAAGQATPEDTLTSVLERLEAVNPALNAVIALDHAGALAAARASTERWRAGTPLS PLDGVPVSVKDNILQQGLPATWGSRLYRDFVPERDETPVARLRAAGALLFGKTNVPEFTLQGYTDNLLFGVTGNPFDPTL TPGGSSGGAVAAVAAGIGPIALGTDGGGSIRRPAGYAGLFGLKPSRGLVPRAHGFPTILHDFEVAGPLARTVADIQLTLT VIADGFAPAAVTAPLRILFAPTFGTAPVDPEIAASLEEAARQFEAMGHSVERAEPFLLAEPMLDIWPVVSQTAAAAVMEE HPGQEHLIAPALAEMARQGAARSATEYLGALNRITAMGREFDALFARHDILLTPAAAALPWPAHEPYPTQIAGRPVGPRG HAVFTPFANVLGLPGLSIPVRPSATGLPIGAQIVGPHGSDARLLALAAAFGEVPRSSS
Sequences:
>Translated_458_residues MSTPTFSPAAEPALWARSASELNALYAAGQATPEDTLTSVLERLEAVNPALNAVIALDHAGALAAARASTERWRAGTPLS PLDGVPVSVKDNILQQGLPATWGSRLYRDFVPERDETPVARLRAAGALLFGKTNVPEFTLQGYTDNLLFGVTGNPFDPTL TPGGSSGGAVAAVAAGIGPIALGTDGGGSIRRPAGYAGLFGLKPSRGLVPRAHGFPTILHDFEVAGPLARTVADIQLTLT VIADGFAPAAVTAPLRILFAPTFGTAPVDPEIAASLEEAARQFEAMGHSVERAEPFLLAEPMLDIWPVVSQTAAAAVMEE HPGQEHLIAPALAEMARQGAARSATEYLGALNRITAMGREFDALFARHDILLTPAAAALPWPAHEPYPTQIAGRPVGPRG HAVFTPFANVLGLPGLSIPVRPSATGLPIGAQIVGPHGSDARLLALAAAFGEVPRSSS >Mature_457_residues STPTFSPAAEPALWARSASELNALYAAGQATPEDTLTSVLERLEAVNPALNAVIALDHAGALAAARASTERWRAGTPLSP LDGVPVSVKDNILQQGLPATWGSRLYRDFVPERDETPVARLRAAGALLFGKTNVPEFTLQGYTDNLLFGVTGNPFDPTLT PGGSSGGAVAAVAAGIGPIALGTDGGGSIRRPAGYAGLFGLKPSRGLVPRAHGFPTILHDFEVAGPLARTVADIQLTLTV IADGFAPAAVTAPLRILFAPTFGTAPVDPEIAASLEEAARQFEAMGHSVERAEPFLLAEPMLDIWPVVSQTAAAAVMEEH PGQEHLIAPALAEMARQGAARSATEYLGALNRITAMGREFDALFARHDILLTPAAAALPWPAHEPYPTQIAGRPVGPRGH AVFTPFANVLGLPGLSIPVRPSATGLPIGAQIVGPHGSDARLLALAAAFGEVPRSSS
Specific function: Unknown
COG id: COG0154
COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amidase family [H]
Homologues:
Organism=Homo sapiens, GI222831590, Length=502, Percent_Identity=29.8804780876494, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI195972892, Length=493, Percent_Identity=24.9492900608519, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI166795287, Length=235, Percent_Identity=33.6170212765957, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17537465, Length=483, Percent_Identity=25.2587991718427, Blast_Score=121, Evalue=7e-28, Organism=Caenorhabditis elegans, GI17543272, Length=409, Percent_Identity=26.6503667481663, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17556264, Length=184, Percent_Identity=35.3260869565217, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17538252, Length=132, Percent_Identity=40.9090909090909, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71990152, Length=155, Percent_Identity=37.4193548387097, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17538254, Length=239, Percent_Identity=30.9623430962343, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17556276, Length=293, Percent_Identity=29.3515358361775, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17556278, Length=338, Percent_Identity=28.1065088757396, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323950, Length=476, Percent_Identity=24.7899159663866, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6319685, Length=392, Percent_Identity=27.2959183673469, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6320448, Length=180, Percent_Identity=37.7777777777778, Blast_Score=87, Evalue=6e-18, Organism=Drosophila melanogaster, GI24648113, Length=502, Percent_Identity=28.2868525896414, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI24648435, Length=469, Percent_Identity=26.4392324093817, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24648437, Length=469, Percent_Identity=26.4392324093817, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI45550774, Length=469, Percent_Identity=26.4392324093817, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI161078093, Length=502, Percent_Identity=28.2868525896414, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI24652985, Length=491, Percent_Identity=27.0875763747454, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI19922090, Length=491, Percent_Identity=27.0875763747454, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24652981, Length=491, Percent_Identity=27.0875763747454, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24652983, Length=491, Percent_Identity=27.0875763747454, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI21356731, Length=465, Percent_Identity=28.6021505376344, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI24644968, Length=492, Percent_Identity=25.4065040650407, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI24648441, Length=402, Percent_Identity=26.865671641791, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24648439, Length=402, Percent_Identity=26.865671641791, Blast_Score=114, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000120 - InterPro: IPR020556 [H]
Pfam domain/function: PF01425 Amidase [H]
EC number: =3.5.1.4 [H]
Molecular weight: Translated: 47406; Mature: 47275
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPTFSPAAEPALWARSASELNALYAAGQATPEDTLTSVLERLEAVNPALNAVIALDHA CCCCCCCCCCCCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHEEEEECCC GALAAARASTERWRAGTPLSPLDGVPVSVKDNILQQGLPATWGSRLYRDFVPERDETPVA CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH RLRAAGALLFGKTNVPEFTLQGYTDNLLFGVTGNPFDPTLTPGGSSGGAVAAVAAGIGPI HHHHHCEEEECCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCE ALGTDGGGSIRRPAGYAGLFGLKPSRGLVPRAHGFPTILHDFEVAGPLARTVADIQLTLT EEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEE VIADGFAPAAVTAPLRILFAPTFGTAPVDPEIAASLEEAARQFEAMGHSVERAEPFLLAE EEECCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEC PMLDIWPVVSQTAAAAVMEEHPGQEHLIAPALAEMARQGAARSATEYLGALNRITAMGRE CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCH FDALFARHDILLTPAAAALPWPAHEPYPTQIAGRPVGPRGHAVFTPFANVLGLPGLSIPV HHHHHHHCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCCCC RPSATGLPIGAQIVGPHGSDARLLALAAAFGEVPRSSS CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure STPTFSPAAEPALWARSASELNALYAAGQATPEDTLTSVLERLEAVNPALNAVIALDHA CCCCCCCCCCCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHEEEEECCC GALAAARASTERWRAGTPLSPLDGVPVSVKDNILQQGLPATWGSRLYRDFVPERDETPVA CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH RLRAAGALLFGKTNVPEFTLQGYTDNLLFGVTGNPFDPTLTPGGSSGGAVAAVAAGIGPI HHHHHCEEEECCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCE ALGTDGGGSIRRPAGYAGLFGLKPSRGLVPRAHGFPTILHDFEVAGPLARTVADIQLTLT EEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEE VIADGFAPAAVTAPLRILFAPTFGTAPVDPEIAASLEEAARQFEAMGHSVERAEPFLLAE EEECCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEC PMLDIWPVVSQTAAAAVMEEHPGQEHLIAPALAEMARQGAARSATEYLGALNRITAMGRE CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCH FDALFARHDILLTPAAAALPWPAHEPYPTQIAGRPVGPRGHAVFTPFANVLGLPGLSIPV HHHHHHHCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCCCC RPSATGLPIGAQIVGPHGSDARLLALAAAFGEVPRSSS CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]