| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yxeK [H]
Identifier: 158424802
GI number: 158424802
Start: 3633820
End: 3635193
Strand: Direct
Name: yxeK [H]
Synonym: AZC_3178
Alternate gene names: 158424802
Gene position: 3633820-3635193 (Clockwise)
Preceding gene: 158424801
Following gene: 158424803
Centisome position: 67.67
GC content: 67.83
Gene sequence:
>1374_bases ATGTCGCCCCGCCGTGAACTGCGCCTCAACACCTTCCAGATGGCCGCGCCCTCGCACAATTGGGCGGGGCTCTGGAGCCA TCCGCGGGACAACCAGACGCAGTACAACACCCTCGCTTATTGGACCGAGATGGCGAAGACCGCCGAGCGCGGCCTGCTTG ACGGCATTTTCATCGCGGACGTGTTCGGCCTCTATGACGTCTATGGCGGCTCCGGAGACGCCGCGATCGCCGCCGGCGCG CAGGCGCCCAATGCCGACCCGACTCTCGCCATCTCCGCCATGGCGCTGGTGACGCAGCACATCGGCTTCGGCGTCACCGC CAATCTCACCTATGAGCATCCCTTCCAGTTCGCCCGCCGCTTCACCACCCTCGACCACCTCACAGGCGGGAGGCTCGGCT GGAACATCGTCACCGGCTATCTCGACAGCGGCGCGCGCGGCATGGGCGAGAGCCTGAACCGCGACCATGACGAGCGCTAC GAGGCGGCCGAGGATTTCATGGCCGCCATCTACAAGCTCTGGGAAGGCTCGTGGGAGGATGACGCCGCCCTTCGCGACAA GGCGCGGGGCCTCTTCACCGACCCGGCCAAGGTCCACCGCATTCTCCATGACGGGGCCTATTACAAGGTGGACGGCCGGG CGCTGGCCGAACCCTCTCCCCAGCGCACGCCCGTGCTCTATCAGGCGGGCACCTCCGCGCGGGGACGGGTGTTCTGCGGT CGCCATGCGGAGGCGACCTTCTTGAATGGCCAGACGCCGTCCATTGCCGGCCAGGCGGTGCGGGGCGTGCGCGAGGCTGC GGTGGCCGCCGGGCGCGGCCCGCGCGACGTGCTCACCTTCCTCGGTGGCACGGTCATCGTGGCTAAGACCTCCGCCGAGG CCCATGAGCTGAAGGAAGAGTACCGACGCCACATCAACGCCGCCGGGCAGTTGGCGCTGGTTTCCGGCTGGACCGGCGTT GACCTCTCCCAGCTTTCGCTGGACGATGCGCTGAGCTTTTCCAAGAGCAACGCCATCCAGTCCACGCTGGAAAACCTCAC CCTCAAGGCCAAGGCGCCAACCCGCGTGCGCGACCTGCTGGACTTCACCCCCGCCGGCGCCCGCGCGCCCATCTTCGTCG GCTCTCCAGTGGAGGTCGCGGACCAGATGCTGGCCTGGGCGGATGAAGCGGACGTGGACGGCTTCAATCTCGTGCGCACC GTCATGCCGGAATCGCTGGAAGCCATCGTCGATCTGCTGATTCCGGAATTGCAGAACCGGGGGGCTTTCAAGACCGCCTA TCGCGAGGGGACGCTGCGGGAAAAGCTCGGCGGCACGGCCCGCCTGCCCGACAGTCATCCGGGCGCCGCCTACCGGCACC GGAGCGCGCCCTGA
Upstream 100 bases:
>100_bases CTTCACCCTCAAGCGGTGGAGGGCGTCTCACGTTTTGGGGCATCATCGCCCATTGTCTGCCGCTCCCCACTCCTGCCCTG CTCCAAGGACTGCCCATCCC
Downstream 100 bases:
>100_bases CGGGGCGGTCGGGACGGGGCTGGTCTGATTCGAGCGAACACGCGGGCGGACAATCCCGGTTCTACATCGTTTGAATGAAA TCCATCGAGCGACCGCCGTC
Product: hypothetical protein
Products: an aldehyde; SO3; H2O; FMN [C]
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MSPRRELRLNTFQMAAPSHNWAGLWSHPRDNQTQYNTLAYWTEMAKTAERGLLDGIFIADVFGLYDVYGGSGDAAIAAGA QAPNADPTLAISAMALVTQHIGFGVTANLTYEHPFQFARRFTTLDHLTGGRLGWNIVTGYLDSGARGMGESLNRDHDERY EAAEDFMAAIYKLWEGSWEDDAALRDKARGLFTDPAKVHRILHDGAYYKVDGRALAEPSPQRTPVLYQAGTSARGRVFCG RHAEATFLNGQTPSIAGQAVRGVREAAVAAGRGPRDVLTFLGGTVIVAKTSAEAHELKEEYRRHINAAGQLALVSGWTGV DLSQLSLDDALSFSKSNAIQSTLENLTLKAKAPTRVRDLLDFTPAGARAPIFVGSPVEVADQMLAWADEADVDGFNLVRT VMPESLEAIVDLLIPELQNRGAFKTAYREGTLREKLGGTARLPDSHPGAAYRHRSAP
Sequences:
>Translated_457_residues MSPRRELRLNTFQMAAPSHNWAGLWSHPRDNQTQYNTLAYWTEMAKTAERGLLDGIFIADVFGLYDVYGGSGDAAIAAGA QAPNADPTLAISAMALVTQHIGFGVTANLTYEHPFQFARRFTTLDHLTGGRLGWNIVTGYLDSGARGMGESLNRDHDERY EAAEDFMAAIYKLWEGSWEDDAALRDKARGLFTDPAKVHRILHDGAYYKVDGRALAEPSPQRTPVLYQAGTSARGRVFCG RHAEATFLNGQTPSIAGQAVRGVREAAVAAGRGPRDVLTFLGGTVIVAKTSAEAHELKEEYRRHINAAGQLALVSGWTGV DLSQLSLDDALSFSKSNAIQSTLENLTLKAKAPTRVRDLLDFTPAGARAPIFVGSPVEVADQMLAWADEADVDGFNLVRT VMPESLEAIVDLLIPELQNRGAFKTAYREGTLREKLGGTARLPDSHPGAAYRHRSAP >Mature_456_residues SPRRELRLNTFQMAAPSHNWAGLWSHPRDNQTQYNTLAYWTEMAKTAERGLLDGIFIADVFGLYDVYGGSGDAAIAAGAQ APNADPTLAISAMALVTQHIGFGVTANLTYEHPFQFARRFTTLDHLTGGRLGWNIVTGYLDSGARGMGESLNRDHDERYE AAEDFMAAIYKLWEGSWEDDAALRDKARGLFTDPAKVHRILHDGAYYKVDGRALAEPSPQRTPVLYQAGTSARGRVFCGR HAEATFLNGQTPSIAGQAVRGVREAAVAAGRGPRDVLTFLGGTVIVAKTSAEAHELKEEYRRHINAAGQLALVSGWTGVD LSQLSLDDALSFSKSNAIQSTLENLTLKAKAPTRVRDLLDFTPAGARAPIFVGSPVEVADQMLAWADEADVDGFNLVRTV MPESLEAIVDLLIPELQNRGAFKTAYREGTLREKLGGTARLPDSHPGAAYRHRSAP
Specific function: Involved In Desulfonation Of Aliphatic Sulfonates. Catalyzes The Conversion Of Pentanesulfonic Acid To Sulfite And Pentaldehyde And Is Able To Desulfonate A Wide Range Of Sulfonated Substrates Including C-2 To C-10 Unsubstituted Linear Alkanesulfonates, S
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1787166, Length=222, Percent_Identity=27.9279279279279, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR016215 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: 1.14.14.5 [C]
Molecular weight: Translated: 49679; Mature: 49548
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRRELRLNTFQMAAPSHNWAGLWSHPRDNQTQYNTLAYWTEMAKTAERGLLDGIFIAD CCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VFGLYDVYGGSGDAAIAAGAQAPNADPTLAISAMALVTQHIGFGVTANLTYEHPFQFARR HHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH FTTLDHLTGGRLGWNIVTGYLDSGARGMGESLNRDHDERYEAAEDFMAAIYKLWEGSWED HHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC DAALRDKARGLFTDPAKVHRILHDGAYYKVDGRALAEPSPQRTPVLYQAGTSARGRVFCG CHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCEECCCCCCCCCEEEECCCCCCCCEEEC RHAEATFLNGQTPSIAGQAVRGVREAAVAAGRGPRDVLTFLGGTVIVAKTSAEAHELKEE CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCHHHHHHHHH YRRHINAAGQLALVSGWTGVDLSQLSLDDALSFSKSNAIQSTLENLTLKAKAPTRVRDLL HHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHH DFTPAGARAPIFVGSPVEVADQMLAWADEADVDGFNLVRTVMPESLEAIVDLLIPELQNR HCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GAFKTAYREGTLREKLGGTARLPDSHPGAAYRHRSAP CCHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SPRRELRLNTFQMAAPSHNWAGLWSHPRDNQTQYNTLAYWTEMAKTAERGLLDGIFIAD CCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VFGLYDVYGGSGDAAIAAGAQAPNADPTLAISAMALVTQHIGFGVTANLTYEHPFQFARR HHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH FTTLDHLTGGRLGWNIVTGYLDSGARGMGESLNRDHDERYEAAEDFMAAIYKLWEGSWED HHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC DAALRDKARGLFTDPAKVHRILHDGAYYKVDGRALAEPSPQRTPVLYQAGTSARGRVFCG CHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCEECCCCCCCCCEEEECCCCCCCCEEEC RHAEATFLNGQTPSIAGQAVRGVREAAVAAGRGPRDVLTFLGGTVIVAKTSAEAHELKEE CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCHHHHHHHHH YRRHINAAGQLALVSGWTGVDLSQLSLDDALSFSKSNAIQSTLENLTLKAKAPTRVRDLL HHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHH DFTPAGARAPIFVGSPVEVADQMLAWADEADVDGFNLVRTVMPESLEAIVDLLIPELQNR HCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GAFKTAYREGTLREKLGGTARLPDSHPGAAYRHRSAP CCHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: an alkanesulfonate; O2; FMNH2 [C]
Specific reaction: an alkanesulfonate + O2 + FMNH2 = an aldehyde + SO3 + H2O + FMN [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]