| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is dszA [H]
Identifier: 158424796
GI number: 158424796
Start: 3626967
End: 3628325
Strand: Reverse
Name: dszA [H]
Synonym: AZC_3172
Alternate gene names: 158424796
Gene position: 3628325-3626967 (Counterclockwise)
Preceding gene: 158424797
Following gene: 158424795
Centisome position: 67.57
GC content: 66.81
Gene sequence:
>1359_bases ATGACCGCGAAACGCCAGATCAAGCTCGGCGCCTTCCTGATGACCGACGGCCACCACATCGCGGCCTGGCGCCATCCCCG CGCACCGGCCAATGCGAATGTGCGGATCGATCATTATCTGCGCCTCGCCCGCATCGCGGAGGCCGCGAAGTTCGATGCCC TCTTCCTCGCCGACAGCGTGGGCGTGCGGAATGAGGACCTCGCCTCCCTCAGCCACACCTCTCGGGCCGTGGCCTTCGAG CCGCTGACCTTGCTCTCGGCTTTGTCGGTGGTGACGCAGAACATCGGCCTCATCGGCACGGCCAGCACCACCTTCAACGA GCCCTATCACATCGCCCGCAAGTTCGCGTCGCTGGACCTTCTGAGCGGTGGCCGGGCGGGCTGGAACGTCGTCACCTCCT CCAGCGAGGCGGAGGCCTACAACTTCAACCTCGACAAGCATGTCGCCCATGCCGACCGCTATGATCGGGCACGCGAGTTC GTGTCCGTCGTCAAGGGCTTGTGGAACACGTGGGAGGATGACGCCTTCCTTCGGGACAAGCTCGGCGGCACCTATTTCGA TGCCGAGAAATTCCATTTGCTGGATCATCGCGGCAAGCATTTCAGGGTGAAGGGGCCGCTCAATGTCGCCCGCTCCCCGC AGGGCCACCCCGTGGTGGTGCAGGCGGGCGCCTCGGAAGACGGCCGCGACCTCGCCGGCGCCACGGCGGAAGCCATCTTC GCGGCCCAGCGCACGCTGGCGGAAGCGCAGGCCTTCTACGCCGACATCAAGGGGCGTGCGGAGAATTACGGCCGCAATCC GGACCATGTGAAGATCATGCCCGGCGTCTTCCCCGTGGTCGGCGCCAGCGAGGCGGAGGCGCGGGAGAAGTTCGAGGAAT TGCAGTCCGGCATCGAGCCGGTGGTGGGTCTCCAGCTCCTCTCGCAGGTGCTGGGCGGCTTCGACCTCTCCGGCTATCCG GTGGATGGGCCCTTGCCGGAACTGCCCGAGACCAACGGACCCAAGAGCCGCCAGAAGCTGCTCATTGATGCCGCCCGCCG CGACAATCTCACGATCCGCCAGCTCTATCTGGAGATCGCCGGCGCCCGCGGCCACTGGCAGGTGGTAGGCACGCCCAAGC AGATCGCCGACCAGCTGGAGGAGCGCTTCACCAAGGGCGCCGCGGACGGCTTCAACGTGATGGCGCCCCACCTGCCCGGC GGTTTGGAAGACTTCATCGAGTTCGTGGTGCCGGAACTGCGGCGTCGCGGCCTCTTCCGCACCGAATATGAGGGCACGAC CCTGCGCGAGAACCTTGGCCTGCCGTTCCCGCAGCATCAAGCGCCCCGCGCCCGGCCGCAGGTGGTGGCGGCGGAGTGA
Upstream 100 bases:
>100_bases TCCGCCTGCGCAACGACGTGCTGGAGGCCCTCGACGCCATCAAGGACGAGGGCGCACGCCCCGGCCTCGCGCACTGATTT TCGATCCGGAGACCCTGCCC
Downstream 100 bases:
>100_bases CAGGCATGCTCGCCCGCTTCGTCCGCGCGGCCTTTGCCGCGCTCCTCCTCATCGGCGCTGCCCTCGCGGCGGTGCCGGCG GGTGCTGCGCCGCTGGTGAT
Product: xenobiotic compound monooxygenase A subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MTAKRQIKLGAFLMTDGHHIAAWRHPRAPANANVRIDHYLRLARIAEAAKFDALFLADSVGVRNEDLASLSHTSRAVAFE PLTLLSALSVVTQNIGLIGTASTTFNEPYHIARKFASLDLLSGGRAGWNVVTSSSEAEAYNFNLDKHVAHADRYDRAREF VSVVKGLWNTWEDDAFLRDKLGGTYFDAEKFHLLDHRGKHFRVKGPLNVARSPQGHPVVVQAGASEDGRDLAGATAEAIF AAQRTLAEAQAFYADIKGRAENYGRNPDHVKIMPGVFPVVGASEAEAREKFEELQSGIEPVVGLQLLSQVLGGFDLSGYP VDGPLPELPETNGPKSRQKLLIDAARRDNLTIRQLYLEIAGARGHWQVVGTPKQIADQLEERFTKGAADGFNVMAPHLPG GLEDFIEFVVPELRRRGLFRTEYEGTTLRENLGLPFPQHQAPRARPQVVAAE
Sequences:
>Translated_452_residues MTAKRQIKLGAFLMTDGHHIAAWRHPRAPANANVRIDHYLRLARIAEAAKFDALFLADSVGVRNEDLASLSHTSRAVAFE PLTLLSALSVVTQNIGLIGTASTTFNEPYHIARKFASLDLLSGGRAGWNVVTSSSEAEAYNFNLDKHVAHADRYDRAREF VSVVKGLWNTWEDDAFLRDKLGGTYFDAEKFHLLDHRGKHFRVKGPLNVARSPQGHPVVVQAGASEDGRDLAGATAEAIF AAQRTLAEAQAFYADIKGRAENYGRNPDHVKIMPGVFPVVGASEAEAREKFEELQSGIEPVVGLQLLSQVLGGFDLSGYP VDGPLPELPETNGPKSRQKLLIDAARRDNLTIRQLYLEIAGARGHWQVVGTPKQIADQLEERFTKGAADGFNVMAPHLPG GLEDFIEFVVPELRRRGLFRTEYEGTTLRENLGLPFPQHQAPRARPQVVAAE >Mature_451_residues TAKRQIKLGAFLMTDGHHIAAWRHPRAPANANVRIDHYLRLARIAEAAKFDALFLADSVGVRNEDLASLSHTSRAVAFEP LTLLSALSVVTQNIGLIGTASTTFNEPYHIARKFASLDLLSGGRAGWNVVTSSSEAEAYNFNLDKHVAHADRYDRAREFV SVVKGLWNTWEDDAFLRDKLGGTYFDAEKFHLLDHRGKHFRVKGPLNVARSPQGHPVVVQAGASEDGRDLAGATAEAIFA AQRTLAEAQAFYADIKGRAENYGRNPDHVKIMPGVFPVVGASEAEAREKFEELQSGIEPVVGLQLLSQVLGGFDLSGYPV DGPLPELPETNGPKSRQKLLIDAARRDNLTIRQLYLEIAGARGHWQVVGTPKQIADQLEERFTKGAADGFNVMAPHLPGG LEDFIEFVVPELRRRGLFRTEYEGTTLRENLGLPFPQHQAPRARPQVVAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1787247, Length=229, Percent_Identity=28.3842794759825, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR016215 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 49717; Mature: 49585
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKRQIKLGAFLMTDGHHIAAWRHPRAPANANVRIDHYLRLARIAEAAKFDALFLADSV CCCCCEEEEEEEEEECCCEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHEEEECCC GVRNEDLASLSHTSRAVAFEPLTLLSALSVVTQNIGLIGTASTTFNEPYHIARKFASLDL CCCCHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHH LSGGRAGWNVVTSSSEAEAYNFNLDKHVAHADRYDRAREFVSVVKGLWNTWEDDAFLRDK CCCCCCCCEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LGGTYFDAEKFHLLDHRGKHFRVKGPLNVARSPQGHPVVVQAGASEDGRDLAGATAEAIF CCCCEECCHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH AAQRTLAEAQAFYADIKGRAENYGRNPDHVKIMPGVFPVVGASEAEAREKFEELQSGIEP HHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH VVGLQLLSQVLGGFDLSGYPVDGPLPELPETNGPKSRQKLLIDAARRDNLTIRQLYLEIA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH GARGHWQVVGTPKQIADQLEERFTKGAADGFNVMAPHLPGGLEDFIEFVVPELRRRGLFR CCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCE TEYEGTTLRENLGLPFPQHQAPRARPQVVAAE ECCCCCCHHHHCCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure TAKRQIKLGAFLMTDGHHIAAWRHPRAPANANVRIDHYLRLARIAEAAKFDALFLADSV CCCCEEEEEEEEEECCCEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHEEEECCC GVRNEDLASLSHTSRAVAFEPLTLLSALSVVTQNIGLIGTASTTFNEPYHIARKFASLDL CCCCHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHH LSGGRAGWNVVTSSSEAEAYNFNLDKHVAHADRYDRAREFVSVVKGLWNTWEDDAFLRDK CCCCCCCCEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LGGTYFDAEKFHLLDHRGKHFRVKGPLNVARSPQGHPVVVQAGASEDGRDLAGATAEAIF CCCCEECCHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH AAQRTLAEAQAFYADIKGRAENYGRNPDHVKIMPGVFPVVGASEAEAREKFEELQSGIEP HHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH VVGLQLLSQVLGGFDLSGYPVDGPLPELPETNGPKSRQKLLIDAARRDNLTIRQLYLEIA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH GARGHWQVVGTPKQIADQLEERFTKGAADGFNVMAPHLPGGLEDFIEFVVPELRRRGLFR CCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCE TEYEGTTLRENLGLPFPQHQAPRARPQVVAAE ECCCCCCHHHHCCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]