| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is ssuA [H]
Identifier: 158424787
GI number: 158424787
Start: 3618096
End: 3619070
Strand: Direct
Name: ssuA [H]
Synonym: AZC_3163
Alternate gene names: 158424787
Gene position: 3618096-3619070 (Clockwise)
Preceding gene: 158424786
Following gene: 158424788
Centisome position: 67.38
GC content: 67.9
Gene sequence:
>975_bases ATGACCGGCTTCCTGCCCACCCGCCGCGCCCTCATGGCCGCCGCCCTCGGCCTCATGGCCGCCAGCCTGCCCGCCCGCGC CGAGGCGCCCAAGGAGATCCGCATCGACTGGGCGACCTATAATCCGGTCTCCCTCGTGCTCAAGGACCAGAAACTGCTGG AGCAGGAATTCGCGAAAGACGGCATCACCATCCGCTGGGTGCAGTCCGCCGGCTCCAACAAGGCGCTGGAATTCCTCAAT GCCGGCTCGCTGGACTTCGGCTCGACCGCTGGCGCGGCGGCGCTGATCGGCAAGATCAACGGCAACCCCATCAAGTCCGT CTATGTCTATTCCCGTCCGGAATGGACGGCGCTGGTGACCCGGCCGGACACCGGCATCAAGACCGTCGCCGACCTCAAGG GCAAGACGGTCGCGGTGACCCGCGGCACCGATCCGCACATCTTCCTCGTGCGGGCGCTCGCCGCCAACGGCCTCACGGAG AAGGACGTGAAGCTGGTGCTGCTCCAGCACGCGGACGGGCGCCTCGCCCTCCAGCGCAAGGATGTGGACGCCTGGGCGGG CCTCGATCCCATCATGGCCTCGGCCGAGGTGGAGGACGGCGCCGTGCTCTTCTTCCGCAAGCCCGAAGACAACACCTGGG GCGTGCTGAACGTGCGCGAAGATTTCGCCAAGGCGAACCCGGACATCGTGAAGCGCGTGCTCGCCACCTATGAGAAGGCG CGCCTCTGGTCGGTGCAGCATCCCAAGGATCTGTCCGCCGCGCTCGTCTCGGCCACCAAGCTGCCCGAGCCGGTCATCGC CCGGCAGCTTGAGCGCACGGATCTCTCCTTCGGCCCCATCGGCAAGGCGCAGAAGGACACCATCCTCGCCGCCGGCGAAG CGCTCCAGAAGGCGGGCGTCGTCGCCGCCGACGTCAACGTGCCGGCGCAGGCGGATGCGCTCATCGACGGCCAGTATCTC ATCGTGGGGCAGTGA
Upstream 100 bases:
>100_bases CAGCCTTCAGGCGCGCATTCTCGCCGCTGTCTGACGGCCATCCGCCCCACCGCTTCGCGCTCCGGCGGCGAGGCGGCGAC CCAACTCTGAGGAGACACCG
Downstream 100 bases:
>100_bases CGCCGTGACCCTGTCGCAGGCCGAGACCTTCTCCGGAGCGGCCGGGCGCGCGGCCGCCACCCCGCGCCGGACAACCGGCT GGCGGCGCTGGCGGTTCGCG
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTGFLPTRRALMAAALGLMAASLPARAEAPKEIRIDWATYNPVSLVLKDQKLLEQEFAKDGITIRWVQSAGSNKALEFLN AGSLDFGSTAGAAALIGKINGNPIKSVYVYSRPEWTALVTRPDTGIKTVADLKGKTVAVTRGTDPHIFLVRALAANGLTE KDVKLVLLQHADGRLALQRKDVDAWAGLDPIMASAEVEDGAVLFFRKPEDNTWGVLNVREDFAKANPDIVKRVLATYEKA RLWSVQHPKDLSAALVSATKLPEPVIARQLERTDLSFGPIGKAQKDTILAAGEALQKAGVVAADVNVPAQADALIDGQYL IVGQ
Sequences:
>Translated_324_residues MTGFLPTRRALMAAALGLMAASLPARAEAPKEIRIDWATYNPVSLVLKDQKLLEQEFAKDGITIRWVQSAGSNKALEFLN AGSLDFGSTAGAAALIGKINGNPIKSVYVYSRPEWTALVTRPDTGIKTVADLKGKTVAVTRGTDPHIFLVRALAANGLTE KDVKLVLLQHADGRLALQRKDVDAWAGLDPIMASAEVEDGAVLFFRKPEDNTWGVLNVREDFAKANPDIVKRVLATYEKA RLWSVQHPKDLSAALVSATKLPEPVIARQLERTDLSFGPIGKAQKDTILAAGEALQKAGVVAADVNVPAQADALIDGQYL IVGQ >Mature_323_residues TGFLPTRRALMAAALGLMAASLPARAEAPKEIRIDWATYNPVSLVLKDQKLLEQEFAKDGITIRWVQSAGSNKALEFLNA GSLDFGSTAGAAALIGKINGNPIKSVYVYSRPEWTALVTRPDTGIKTVADLKGKTVAVTRGTDPHIFLVRALAANGLTEK DVKLVLLQHADGRLALQRKDVDAWAGLDPIMASAEVEDGAVLFFRKPEDNTWGVLNVREDFAKANPDIVKRVLATYEKAR LWSVQHPKDLSAALVSATKLPEPVIARQLERTDLSFGPIGKAQKDTILAAGEALQKAGVVAADVNVPAQADALIDGQYLI VGQ
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081803, Length=269, Percent_Identity=31.2267657992565, Blast_Score=111, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 34809; Mature: 34678
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGFLPTRRALMAAALGLMAASLPARAEAPKEIRIDWATYNPVSLVLKDQKLLEQEFAKD CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEEECCHHHHHHHHHHC GITIRWVQSAGSNKALEFLNAGSLDFGSTAGAAALIGKINGNPIKSVYVYSRPEWTALVT CCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEE RPDTGIKTVADLKGKTVAVTRGTDPHIFLVRALAANGLTEKDVKLVLLQHADGRLALQRK CCCCCCHHHHHCCCCEEEEECCCCCCEEEEEEHHHCCCCCCCEEEEEEEECCCEEEEEEC DVDAWAGLDPIMASAEVEDGAVLFFRKPEDNTWGVLNVREDFAKANPDIVKRVLATYEKA CCHHHCCCCHHHHCCCCCCCEEEEEECCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHH RLWSVQHPKDLSAALVSATKLPEPVIARQLERTDLSFGPIGKAQKDTILAAGEALQKAGV HEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHCCC VAADVNVPAQADALIDGQYLIVGQ EEEECCCCCCCCEEECCEEEEEEC >Mature Secondary Structure TGFLPTRRALMAAALGLMAASLPARAEAPKEIRIDWATYNPVSLVLKDQKLLEQEFAKD CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEEECCHHHHHHHHHHC GITIRWVQSAGSNKALEFLNAGSLDFGSTAGAAALIGKINGNPIKSVYVYSRPEWTALVT CCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEE RPDTGIKTVADLKGKTVAVTRGTDPHIFLVRALAANGLTEKDVKLVLLQHADGRLALQRK CCCCCCHHHHHCCCCEEEEECCCCCCEEEEEEHHHCCCCCCCEEEEEEEECCCEEEEEEC DVDAWAGLDPIMASAEVEDGAVLFFRKPEDNTWGVLNVREDFAKANPDIVKRVLATYEKA CCHHHCCCCHHHHCCCCCCCEEEEEECCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHH RLWSVQHPKDLSAALVSATKLPEPVIARQLERTDLSFGPIGKAQKDTILAAGEALQKAGV HEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHCCC VAADVNVPAQADALIDGQYLIVGQ EEEECCCCCCCCEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10506196; 8905232; 9278503 [H]