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The map label for this gene is ssuC [H]

Identifier: 158424785

GI number: 158424785

Start: 3616393

End: 3617244

Strand: Direct

Name: ssuC [H]

Synonym: AZC_3161

Alternate gene names: 158424785

Gene position: 3616393-3617244 (Clockwise)

Preceding gene: 158424784

Following gene: 158424786

Centisome position: 67.35

GC content: 67.84

Gene sequence:

>852_bases
ATGAGCGACGCCGCCATCGAGAGCGCGACGCTGGCCTCGGCCCCCGCCGTCTCCCGGCAGCGGGGCAGCGTGCTGAAGGC
CCTCGCCGGCGGCCTGCTGCCCTGGGCGCTGCCGCTCGCGGTGCTGGTTCTGTGGCAGGCGGCTGCGAGCTTCGGCTTCC
TCTCCTCCCGCGTCCTGCCGGCGCCGACCGACGTAGCGCTCGCCTTCTGGCGCACGCTGAAGGATGGCTCCCTGCTCGCC
AACATCGCCGTCAGCACGAAGCGGGCCCTCACCGGCCTTTTCATCGGCGGCGGGATCGGCTTTGCGCTCGGCGTGCTCAA
CGGCATCTGGCGGCCCGCCGAGACGGCCCTCGATTCCACCCTCCAGATGCTGCGCAACGTGCCGCATCTCGCCATCATCC
CGCTGGTCATCCTGTGGTTCGGCATCGATGAGGAGGCGAAGGTCTTCCTCGTCGCCATCGGCGTTGCCTTTCCCATCTAT
CTCAACACCTTCCACGGCATCCGCACGGTGGATCGCGGCCTCGTGGAGATGGCGCGGGTCTATGGTCTTTCGCCAGCGGC
CCTGTTCTGGCGCATCGTTCTGCCGGGCGCCCTGCCCTCCATTCTCGTGGGCCTGCGCTATGCGCTCGGCATCATGTGGC
TGACGCTCATCGTTGCGGAGACCATCTCCTCCACCTCCGGCATCGGCTACATGACCATGAATGCCCGCGAGTTTCTCCAG
ACCGACGTGGTGGTGCTGGGCGTGCTTGCCTATGCCCTGCTGGGCAAACTGGCGGACAGCCTGACACGCGCCATCGAGCA
CCGGGCGCTGGCCTGGCATCCCGCTTATCAGGGCAAGGGGCTTGCCGCATGA

Upstream 100 bases:

>100_bases
CGGTGGTGGCTCAGCAGCAGCAGGTGGCGGACGCCTTCTTCAAGCTGGGCCTCATCCCCAAGGAGATCCGCATCTCCGAC
GCGGTGCGGGCCCTCAAATC

Downstream 100 bases:

>100_bases
GCACGCCCCTCGTGGCCTTCGGCGACGGCCTGCTCACTGCCCCGCGCGCGCCCACCGAGGCGGCGCCCGCGCGCTTCGGC
GGCGCGCCCGTCTCCCTCTC

Product: alkanesulfonate transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSDAAIESATLASAPAVSRQRGSVLKALAGGLLPWALPLAVLVLWQAAASFGFLSSRVLPAPTDVALAFWRTLKDGSLLA
NIAVSTKRALTGLFIGGGIGFALGVLNGIWRPAETALDSTLQMLRNVPHLAIIPLVILWFGIDEEAKVFLVAIGVAFPIY
LNTFHGIRTVDRGLVEMARVYGLSPAALFWRIVLPGALPSILVGLRYALGIMWLTLIVAETISSTSGIGYMTMNAREFLQ
TDVVVLGVLAYALLGKLADSLTRAIEHRALAWHPAYQGKGLAA

Sequences:

>Translated_283_residues
MSDAAIESATLASAPAVSRQRGSVLKALAGGLLPWALPLAVLVLWQAAASFGFLSSRVLPAPTDVALAFWRTLKDGSLLA
NIAVSTKRALTGLFIGGGIGFALGVLNGIWRPAETALDSTLQMLRNVPHLAIIPLVILWFGIDEEAKVFLVAIGVAFPIY
LNTFHGIRTVDRGLVEMARVYGLSPAALFWRIVLPGALPSILVGLRYALGIMWLTLIVAETISSTSGIGYMTMNAREFLQ
TDVVVLGVLAYALLGKLADSLTRAIEHRALAWHPAYQGKGLAA
>Mature_282_residues
SDAAIESATLASAPAVSRQRGSVLKALAGGLLPWALPLAVLVLWQAAASFGFLSSRVLPAPTDVALAFWRTLKDGSLLAN
IAVSTKRALTGLFIGGGIGFALGVLNGIWRPAETALDSTLQMLRNVPHLAIIPLVILWFGIDEEAKVFLVAIGVAFPIYL
NTFHGIRTVDRGLVEMARVYGLSPAALFWRIVLPGALPSILVGLRYALGIMWLTLIVAETISSTSGIGYMTMNAREFLQT
DVVVLGVLAYALLGKLADSLTRAIEHRALAWHPAYQGKGLAA

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=246, Percent_Identity=61.7886178861789, Blast_Score=289, Evalue=1e-79,
Organism=Escherichia coli, GI1786564, Length=242, Percent_Identity=34.297520661157, Blast_Score=139, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30082; Mature: 29951

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAAIESATLASAPAVSRQRGSVLKALAGGLLPWALPLAVLVLWQAAASFGFLSSRVLP
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
APTDVALAFWRTLKDGSLLANIAVSTKRALTGLFIGGGIGFALGVLNGIWRPAETALDST
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LQMLRNVPHLAIIPLVILWFGIDEEAKVFLVAIGVAFPIYLNTFHGIRTVDRGLVEMARV
HHHHHCCCHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGLSPAALFWRIVLPGALPSILVGLRYALGIMWLTLIVAETISSTSGIGYMTMNAREFLQ
HCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHH
TDVVVLGVLAYALLGKLADSLTRAIEHRALAWHPAYQGKGLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
>Mature Secondary Structure 
SDAAIESATLASAPAVSRQRGSVLKALAGGLLPWALPLAVLVLWQAAASFGFLSSRVLP
CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
APTDVALAFWRTLKDGSLLANIAVSTKRALTGLFIGGGIGFALGVLNGIWRPAETALDST
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LQMLRNVPHLAIIPLVILWFGIDEEAKVFLVAIGVAFPIYLNTFHGIRTVDRGLVEMARV
HHHHHCCCHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGLSPAALFWRIVLPGALPSILVGLRYALGIMWLTLIVAETISSTSGIGYMTMNAREFLQ
HCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHH
TDVVVLGVLAYALLGKLADSLTRAIEHRALAWHPAYQGKGLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]