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The map label for this gene is soxA [H]

Identifier: 158424782

GI number: 158424782

Start: 3613099

End: 3614493

Strand: Reverse

Name: soxA [H]

Synonym: AZC_3158

Alternate gene names: 158424782

Gene position: 3614493-3613099 (Counterclockwise)

Preceding gene: 158424790

Following gene: 158424781

Centisome position: 67.31

GC content: 69.18

Gene sequence:

>1395_bases
ATGGCGCGGGACATTCTCTTCAACGCCTTCGCCATGAACTGCGTCGGCCACCAGTCCCCCGGACTATGGCGCCATCCGAA
GGATCGGACGGCCGACTACAACCGGCTGCCCTATTGGCTCGATCTTGCCCGCGTGCTGGAGCGGGGGCTGTTCGACGGCC
TGTTCCTCGCCGACGTGCTGGGCGTCTATGACGTCTTCGGCGGCTCCCCGGACGCGGCCCTGCGCAACGCCACGCAAGTT
CCGGTGAATGACCCCATGCTCATCGTGCCCGCCATGGCGGCGGTGACGCAGCATCTGGGGTTCGGCGTCACCTCCACGCT
CACCTACGAGCCGCCCTATCCCTTCGCCCGGCGCATGAGCACGCTCGATCACCTCACCGAAGGGCGCGTCGGCTGGAACA
TCGTCACCGGCTATCTCGACAGCGCCGCTCGGGGCATGGGCCTTGCCCACCAGCGCGCCCATGACGACCGCTATGCGGTG
GCGGACGATTACATGGAGGTGGTCTACAAGCTCTGGGAGGGCTCGTGGGAGGAGGGGGCCGCGGTGCGCGACCGGGCGCA
GGGCGTCTTCACCGATCCCGCCAAGGTCCATCGCGTGCGCCATCAGGGGCCGCATTATGCGCTCGATGCCATCCATCTGT
GCGAGCCCTCGCCCCAGCGCACGCCCGTGCTCTATCAGGCCGGCACCTCGCCGCGTGGGCGCGCCTTTGCCGGGCGCCAT
GCGGAAGCGGTGTTCGTCTCCGGCCCCTCCGTCGCAGTGATCGCGCCGCGCGTCGCCGCCCTGCGACAGGCGGCACAGGA
GAATGGCCGTGCGGCCGATGACATCCGCATCTTCGCCATGGCCACCATCATCGTCGGGGAAACCGAGGCGGCGGCGCGGG
CGAAGCTGGACGACTACCGCGCCCACATCAGCCGCGAGGGTGCGCTGACGCTCTATTCCGGCTGGACGGGCGTCGATTTC
TCCACCTATGCCCATGACCAGCAGGTCCGCCACATCGAGAGCGAAGCCGGCCGCAGCGCCATGGACAATATGACCCGCGC
CGATCCGAACCGGGTCTGGACCGTGGGCGAGGTGGCCGAGCATGTGGGCATTGGCGGCGTCGGCCCCGTCTTTGTGGGCG
ATCCGGCGCAGGTGGCCGACGCGCTGGAGGGCTTCATCGGAGCCACCGGCATCGACGGCTTCAATCTCGCCTTCGCCATC
AGCCCCGGCAGCTATGAGGACATTGCCGATCTGGTGGTGCCCGAGTTGCAGCGGCGCGGCCGCTACAAGCGCGCCTATGC
GCCCGGCACCTTGCGCGAGAAGCTGTTCGGTGCCGCGCCCCGCCTTTCCGCCCCGCATCCGGCGGCCTCCTACCGCCGGC
TTCCCCCGCACGCCTCCGGCCTTGCGGCCGAATGA

Upstream 100 bases:

>100_bases
AATAAAATCCATCATATGAATGAGTTTAATGTTTTTCACAGCGCGGGGTGGGGGATCTGATGCCCCAGAGATCGCTGCCG
CCGGTCGGGATGGGATAGCC

Downstream 100 bases:

>100_bases
TCTCACCTTTCGAGAAGAAACCATGACCGATACCAGCGATCTCGTGCCCGCCCCCGAAGCCAATGTGCTGTGGTTCCTGC
CGACCCATGGCGACGGGCAT

Product: monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MARDILFNAFAMNCVGHQSPGLWRHPKDRTADYNRLPYWLDLARVLERGLFDGLFLADVLGVYDVFGGSPDAALRNATQV
PVNDPMLIVPAMAAVTQHLGFGVTSTLTYEPPYPFARRMSTLDHLTEGRVGWNIVTGYLDSAARGMGLAHQRAHDDRYAV
ADDYMEVVYKLWEGSWEEGAAVRDRAQGVFTDPAKVHRVRHQGPHYALDAIHLCEPSPQRTPVLYQAGTSPRGRAFAGRH
AEAVFVSGPSVAVIAPRVAALRQAAQENGRAADDIRIFAMATIIVGETEAAARAKLDDYRAHISREGALTLYSGWTGVDF
STYAHDQQVRHIESEAGRSAMDNMTRADPNRVWTVGEVAEHVGIGGVGPVFVGDPAQVADALEGFIGATGIDGFNLAFAI
SPGSYEDIADLVVPELQRRGRYKRAYAPGTLREKLFGAAPRLSAPHPAASYRRLPPHASGLAAE

Sequences:

>Translated_464_residues
MARDILFNAFAMNCVGHQSPGLWRHPKDRTADYNRLPYWLDLARVLERGLFDGLFLADVLGVYDVFGGSPDAALRNATQV
PVNDPMLIVPAMAAVTQHLGFGVTSTLTYEPPYPFARRMSTLDHLTEGRVGWNIVTGYLDSAARGMGLAHQRAHDDRYAV
ADDYMEVVYKLWEGSWEEGAAVRDRAQGVFTDPAKVHRVRHQGPHYALDAIHLCEPSPQRTPVLYQAGTSPRGRAFAGRH
AEAVFVSGPSVAVIAPRVAALRQAAQENGRAADDIRIFAMATIIVGETEAAARAKLDDYRAHISREGALTLYSGWTGVDF
STYAHDQQVRHIESEAGRSAMDNMTRADPNRVWTVGEVAEHVGIGGVGPVFVGDPAQVADALEGFIGATGIDGFNLAFAI
SPGSYEDIADLVVPELQRRGRYKRAYAPGTLREKLFGAAPRLSAPHPAASYRRLPPHASGLAAE
>Mature_463_residues
ARDILFNAFAMNCVGHQSPGLWRHPKDRTADYNRLPYWLDLARVLERGLFDGLFLADVLGVYDVFGGSPDAALRNATQVP
VNDPMLIVPAMAAVTQHLGFGVTSTLTYEPPYPFARRMSTLDHLTEGRVGWNIVTGYLDSAARGMGLAHQRAHDDRYAVA
DDYMEVVYKLWEGSWEEGAAVRDRAQGVFTDPAKVHRVRHQGPHYALDAIHLCEPSPQRTPVLYQAGTSPRGRAFAGRHA
EAVFVSGPSVAVIAPRVAALRQAAQENGRAADDIRIFAMATIIVGETEAAARAKLDDYRAHISREGALTLYSGWTGVDFS
TYAHDQQVRHIESEAGRSAMDNMTRADPNRVWTVGEVAEHVGIGGVGPVFVGDPAQVADALEGFIGATGIDGFNLAFAIS
PGSYEDIADLVVPELQRRGRYKRAYAPGTLREKLFGAAPRLSAPHPAASYRRLPPHASGLAAE

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=342, Percent_Identity=26.6081871345029, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 50476; Mature: 50345

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDILFNAFAMNCVGHQSPGLWRHPKDRTADYNRLPYWLDLARVLERGLFDGLFLADVL
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GVYDVFGGSPDAALRNATQVPVNDPMLIVPAMAAVTQHLGFGVTSTLTYEPPYPFARRMS
HHHHHCCCCCCHHHCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH
TLDHLTEGRVGWNIVTGYLDSAARGMGLAHQRAHDDRYAVADDYMEVVYKLWEGSWEEGA
HHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
AVRDRAQGVFTDPAKVHRVRHQGPHYALDAIHLCEPSPQRTPVLYQAGTSPRGRAFAGRH
HHHHHCCCCCCCHHHHHHHHHCCCCCEEEEHEECCCCCCCCCEEEECCCCCCCCCCCCCC
AEAVFVSGPSVAVIAPRVAALRQAAQENGRAADDIRIFAMATIIVGETEAAARAKLDDYR
CCEEEECCCCEEEEHHHHHHHHHHHHHCCCCHHHEEEEEEEEEEECCCHHHHHHHHHHHH
AHISREGALTLYSGWTGVDFSTYAHDQQVRHIESEAGRSAMDNMTRADPNRVWTVGEVAE
HHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
HVGIGGVGPVFVGDPAQVADALEGFIGATGIDGFNLAFAISPGSYEDIADLVVPELQRRG
HCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCC
RYKRAYAPGTLREKLFGAAPRLSAPHPAASYRRLPPHASGLAAE
CCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ARDILFNAFAMNCVGHQSPGLWRHPKDRTADYNRLPYWLDLARVLERGLFDGLFLADVL
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GVYDVFGGSPDAALRNATQVPVNDPMLIVPAMAAVTQHLGFGVTSTLTYEPPYPFARRMS
HHHHHCCCCCCHHHCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH
TLDHLTEGRVGWNIVTGYLDSAARGMGLAHQRAHDDRYAVADDYMEVVYKLWEGSWEEGA
HHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
AVRDRAQGVFTDPAKVHRVRHQGPHYALDAIHLCEPSPQRTPVLYQAGTSPRGRAFAGRH
HHHHHCCCCCCCHHHHHHHHHCCCCCEEEEHEECCCCCCCCCEEEECCCCCCCCCCCCCC
AEAVFVSGPSVAVIAPRVAALRQAAQENGRAADDIRIFAMATIIVGETEAAARAKLDDYR
CCEEEECCCCEEEEHHHHHHHHHHHHHCCCCHHHEEEEEEEEEEECCCHHHHHHHHHHHH
AHISREGALTLYSGWTGVDFSTYAHDQQVRHIESEAGRSAMDNMTRADPNRVWTVGEVAE
HHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
HVGIGGVGPVFVGDPAQVADALEGFIGATGIDGFNLAFAISPGSYEDIADLVVPELQRRG
HCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCC
RYKRAYAPGTLREKLFGAAPRLSAPHPAASYRRLPPHASGLAAE
CCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]