| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is hisD [H]
Identifier: 158424773
GI number: 158424773
Start: 3602688
End: 3603980
Strand: Reverse
Name: hisD [H]
Synonym: AZC_3149
Alternate gene names: 158424773
Gene position: 3603980-3602688 (Counterclockwise)
Preceding gene: 158424774
Following gene: 158424772
Centisome position: 67.12
GC content: 69.37
Gene sequence:
>1293_bases ATGCCGATCCGCCTCGACGCCAAGTCCACCGCTTTCCCCGACGCCTTCGCCACCTTCCTCGCCAGCAAGCGGGAAGCGTC AACCGATGTTGCGGTGGCTGTCGCCGACATCATCGCCGGCGTGCGGGCGCGCGGGGATGCGGCCCTGATCGATTATTCGC GCACCTTCGACCGGGTCGAGCTGGAAGGCCGCATCCGCGTGACCGAGGCGGAGATCGAGGCGGCGCTCGCCGAGGTGCCG CAGGACACCTTCGAGGCGCTGAAGTTTGCGAAGGCCCGCATCGAGGCACACCACGCCCGCCAGCTTCCGGCGGACGAGCG CTATACGGATGCAGTCGGGGTCGAGCTCGGCCAGCGCTGGACGCCGGTGGATGCGGTGGGTCTTTATGTGCCCGGCGGCA CGGCGGCCTATCCCTCGTCCGTGCTCATGAATGCGGTGCCGGCGAAGGTCGCGGGCGTGCCGCGTGTCGCCATGGTGGTG CCTTCGCCCGATGGCGTCATCGCGCCGCTGGTGCTCGCCGCTGCACGTCTTGCCGGCGTGGACGAGGTCTATCGCGTGGG CGGGGCACAGGCGGTGGCCGCGCTCGCCTATGGCACCGAGACGATCGCTCCGGTGGACAAGATCGTCGGCCCGGGCAACG CCTATGTGGCGGCGGCCAAGCGGCAGGTGTTCGGCAAGGTCGGTATCGACATGATCGCCGGCCCCTCCGAGGTGCTGATC CTCGCCGACGGCAACGCCAATGCCGCCTGGATCGCCGCGGACCTGCTGGCGCAGGCCGAGCATGATGCCGCCGCCCAGTC CATCCTCGTCACCGATTCCCCCGTGCTCGCCGATGCGGTCACCCGCGCGGTCGAGGCGCAGCTCACCACGCTGCCCCGCC GCGAGATCGCGGAAGCCTCCTGGCGCGACCACGGGGCCATCATCCTGGTCGGCAGCATGGACGAGGCGCTGCCGCTGGTG GACCGCGTTGCCCCCGAGCATCTGGAAATCCATGCGGACGATGCCGATGCGCTTGCCGACCGCATCCGTCATGCGGGTGC GATCTTCGTGGGCGCCTATACGCCGGAGGCCATCGGCGACTATGTGGGCGGCACCAATCATGTGCTGCCCACCGCCCGTT CGGCCCGCTTCTCTTCCGGGCTCGGCGTCTATGACTTCCTCAAGCGCACCTCCATCCTGAAGTGCAGCCCGGCCTCGCTG AACGTGATCGGGCCGGCCGCGGTGCGCCTTGCCGAAGTGGAACGGCTCGATGCCCACGGCCGCTCTATCCTCATCCGCAC CAATGCCGGCTGA
Upstream 100 bases:
>100_bases GCGTGAAGCGCCGCCGGGCCGCTCCGGGGGCGTTTCGAGCGCCGGCGGATCCGGATGGAGCGACAGCTCCGGCCCGTGTC TCCGGCCCCGGGAACCAGAG
Downstream 100 bases:
>100_bases GGCCCGTTGAGTTCCGACCAGGTGACAGAGGGCCGCCGCGTCCACCCGGGCGCGCGCTGATCGAACCGGATGCGTGAGAC GCCATGAGCCAGACCCCGCC
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MPIRLDAKSTAFPDAFATFLASKREASTDVAVAVADIIAGVRARGDAALIDYSRTFDRVELEGRIRVTEAEIEAALAEVP QDTFEALKFAKARIEAHHARQLPADERYTDAVGVELGQRWTPVDAVGLYVPGGTAAYPSSVLMNAVPAKVAGVPRVAMVV PSPDGVIAPLVLAAARLAGVDEVYRVGGAQAVAALAYGTETIAPVDKIVGPGNAYVAAAKRQVFGKVGIDMIAGPSEVLI LADGNANAAWIAADLLAQAEHDAAAQSILVTDSPVLADAVTRAVEAQLTTLPRREIAEASWRDHGAIILVGSMDEALPLV DRVAPEHLEIHADDADALADRIRHAGAIFVGAYTPEAIGDYVGGTNHVLPTARSARFSSGLGVYDFLKRTSILKCSPASL NVIGPAAVRLAEVERLDAHGRSILIRTNAG
Sequences:
>Translated_430_residues MPIRLDAKSTAFPDAFATFLASKREASTDVAVAVADIIAGVRARGDAALIDYSRTFDRVELEGRIRVTEAEIEAALAEVP QDTFEALKFAKARIEAHHARQLPADERYTDAVGVELGQRWTPVDAVGLYVPGGTAAYPSSVLMNAVPAKVAGVPRVAMVV PSPDGVIAPLVLAAARLAGVDEVYRVGGAQAVAALAYGTETIAPVDKIVGPGNAYVAAAKRQVFGKVGIDMIAGPSEVLI LADGNANAAWIAADLLAQAEHDAAAQSILVTDSPVLADAVTRAVEAQLTTLPRREIAEASWRDHGAIILVGSMDEALPLV DRVAPEHLEIHADDADALADRIRHAGAIFVGAYTPEAIGDYVGGTNHVLPTARSARFSSGLGVYDFLKRTSILKCSPASL NVIGPAAVRLAEVERLDAHGRSILIRTNAG >Mature_429_residues PIRLDAKSTAFPDAFATFLASKREASTDVAVAVADIIAGVRARGDAALIDYSRTFDRVELEGRIRVTEAEIEAALAEVPQ DTFEALKFAKARIEAHHARQLPADERYTDAVGVELGQRWTPVDAVGLYVPGGTAAYPSSVLMNAVPAKVAGVPRVAMVVP SPDGVIAPLVLAAARLAGVDEVYRVGGAQAVAALAYGTETIAPVDKIVGPGNAYVAAAKRQVFGKVGIDMIAGPSEVLIL ADGNANAAWIAADLLAQAEHDAAAQSILVTDSPVLADAVTRAVEAQLTTLPRREIAEASWRDHGAIILVGSMDEALPLVD RVAPEHLEIHADDADALADRIRHAGAIFVGAYTPEAIGDYVGGTNHVLPTARSARFSSGLGVYDFLKRTSILKCSPASLN VIGPAAVRLAEVERLDAHGRSILIRTNAG
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=408, Percent_Identity=42.6470588235294, Blast_Score=293, Evalue=1e-80, Organism=Saccharomyces cerevisiae, GI6319819, Length=434, Percent_Identity=38.2488479262673, Blast_Score=263, Evalue=4e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 45016; Mature: 44884
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRLDAKSTAFPDAFATFLASKREASTDVAVAVADIIAGVRARGDAALIDYSRTFDRVE CCEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEE LEGRIRVTEAEIEAALAEVPQDTFEALKFAKARIEAHHARQLPADERYTDAVGVELGQRW ECCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC TPVDAVGLYVPGGTAAYPSSVLMNAVPAKVAGVPRVAMVVPSPDGVIAPLVLAAARLAGV CCCCEEEEEECCCCCCCCHHHHHHHCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCH DEVYRVGGAQAVAALAYGTETIAPVDKIVGPGNAYVAAAKRQVFGKVGIDMIAGPSEVLI HHHHHCCCHHHHHHHHHCCCHHCCHHHHCCCCCCEEHHHHHHHHHHCCCCEECCCCEEEE LADGNANAAWIAADLLAQAEHDAAAQSILVTDSPVLADAVTRAVEAQLTTLPRREIAEAS EECCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHCC WRDHGAIILVGSMDEALPLVDRVAPEHLEIHADDADALADRIRHAGAIFVGAYTPEAIGD CCCCCEEEEEECCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCEEEEECCCHHHHHH YVGGTNHVLPTARSARFSSGLGVYDFLKRTSILKCSPASLNVIGPAAVRLAEVERLDAHG HCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEECCCCCEEECHHHHHHHHHHHHCCCC RSILIRTNAG CEEEEEECCC >Mature Secondary Structure PIRLDAKSTAFPDAFATFLASKREASTDVAVAVADIIAGVRARGDAALIDYSRTFDRVE CEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEE LEGRIRVTEAEIEAALAEVPQDTFEALKFAKARIEAHHARQLPADERYTDAVGVELGQRW ECCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC TPVDAVGLYVPGGTAAYPSSVLMNAVPAKVAGVPRVAMVVPSPDGVIAPLVLAAARLAGV CCCCEEEEEECCCCCCCCHHHHHHHCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCH DEVYRVGGAQAVAALAYGTETIAPVDKIVGPGNAYVAAAKRQVFGKVGIDMIAGPSEVLI HHHHHCCCHHHHHHHHHCCCHHCCHHHHCCCCCCEEHHHHHHHHHHCCCCEECCCCEEEE LADGNANAAWIAADLLAQAEHDAAAQSILVTDSPVLADAVTRAVEAQLTTLPRREIAEAS EECCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHCC WRDHGAIILVGSMDEALPLVDRVAPEHLEIHADDADALADRIRHAGAIFVGAYTPEAIGD CCCCCEEEEEECCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCEEEEECCCHHHHHH YVGGTNHVLPTARSARFSSGLGVYDFLKRTSILKCSPASLNVIGPAAVRLAEVERLDAHG HCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEECCCCCEEECHHHHHHHHHHHHCCCC RSILIRTNAG CEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]