| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is aatA [H]
Identifier: 158424756
GI number: 158424756
Start: 3589299
End: 3590501
Strand: Direct
Name: aatA [H]
Synonym: AZC_3132
Alternate gene names: 158424756
Gene position: 3589299-3590501 (Clockwise)
Preceding gene: 158424753
Following gene: 158424757
Centisome position: 66.84
GC content: 64.51
Gene sequence:
>1203_bases ATGAGCCTTCTCTCGTCCGCCCTCAAGCGTATCAAGCCCTCGCCCACCATCGCCATTTCCAACAAGGCGCGTGAGCTGAA GGCCACCGGACGTGACATCATCGCCCTCAGCGCCGGCGAGCCCGATTTCGACACGCCGGACAACATCAAGGAAGCGGCCA TCGCGGCCATCCGCCGGGGCGAGACCAAGTATACCGCCGTGGATGGCATGCCCGAGCTGAAGGCGGCCATCTGCCGCAAG TTCAAGCGCGAGAACGGTCTCGACTACAAGCCCTCGCAGGTCACGGTCGGCACCGGCGGCAAGCAGGTGCTGTTCAATGC CCTGGTCGCGACGGTGGACGCCGGCGACGAGGTGCTGATTCCCGCCCCCTTCTGGGTGAGCTATCCGGACATCGTGGAAT TCTGCGGCGGCAAGCCCGTCTCCGTGCCGACCACGATCGAGGACAATTTCAAGCTGCGTCCGGACGTGCTGGAAGCCCAC ATCACGCCGAAGACCAAGTGGCTGATCTTCAACTCCCCGTCCAATCCGTCGGGCGCCGCCTACAGCTTCGATGAGCTGAA GGCCCTCACCGACGTGCTTCTGCGCCACCCGCACGTCATGATCCTCACGGACGACATGTACGAGCACCTCGTCTATGACG ACTTCAAGTTCGTCACCCCGGCGCAGGTGGAGCCGCAGCTCTACGACCGCACGCTGACCATGAACGGCGTGTCCAAGGCC TATTGCATGACCGGCTGGCGCATCGGCTATGCGGCCGGCCCCGAGGCCCTGATCAAGGCCATCGGCACGCTGCAGTCGCA GTCCACCTCCAACCCCTCCTCCATCGCCCAGTGGGCGGCGCTCGAGGCGCTGGATGGTCCGCAGGACTTCATCGCCGAGA ACAACAAGGTGTTCAAGGAGCGCCGCGATCTCGTGGTCTCCATGCTGAACCAGGCCAAGGGTCTGCATTGCCCGAAGCCG GAAGGCGCCTTCTACGTGTTCCCGTCCTGCGCCGGGACCATCGGCAAGAAGACCCCCGAGGGCAAGGTCATCGCCACGGA CGAGGATTTCGCGACCGAACTCCTGAGCGCAGAAGGCGTTGCGGTGGTCCATGGCTCGGCCTTCGGCCTCGGCCCGGCCT TCCGTATCTCCTATGCGACGGCGACCTCGGATCTCGAGGAAGCCTGCCGCCGCATCCAGCGCTTCTGTGGCGCATTGGTC TGA
Upstream 100 bases:
>100_bases CCCGGCAAGGCTATATGGCGCGCCGGGATTTTCGTGTCACCTTCGCGTCGCCCCAGCGCAGAGAACGCGGCTGGAGCGAT GTGCCCGGAGCCTTACGGCC
Downstream 100 bases:
>100_bases GTTCCAGAAAAAAGGAACCTGGGGCCCTCGGGCGCGTTGGCGAACGGTTGAGACCGAGCTAAGGCTTGCCCACCCGCAAC GGGTGGGTAACCCTCTGGGC
Product: aspartate aminotransferase A
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MSLLSSALKRIKPSPTIAISNKARELKATGRDIIALSAGEPDFDTPDNIKEAAIAAIRRGETKYTAVDGMPELKAAICRK FKRENGLDYKPSQVTVGTGGKQVLFNALVATVDAGDEVLIPAPFWVSYPDIVEFCGGKPVSVPTTIEDNFKLRPDVLEAH ITPKTKWLIFNSPSNPSGAAYSFDELKALTDVLLRHPHVMILTDDMYEHLVYDDFKFVTPAQVEPQLYDRTLTMNGVSKA YCMTGWRIGYAAGPEALIKAIGTLQSQSTSNPSSIAQWAALEALDGPQDFIAENNKVFKERRDLVVSMLNQAKGLHCPKP EGAFYVFPSCAGTIGKKTPEGKVIATDEDFATELLSAEGVAVVHGSAFGLGPAFRISYATATSDLEEACRRIQRFCGALV
Sequences:
>Translated_400_residues MSLLSSALKRIKPSPTIAISNKARELKATGRDIIALSAGEPDFDTPDNIKEAAIAAIRRGETKYTAVDGMPELKAAICRK FKRENGLDYKPSQVTVGTGGKQVLFNALVATVDAGDEVLIPAPFWVSYPDIVEFCGGKPVSVPTTIEDNFKLRPDVLEAH ITPKTKWLIFNSPSNPSGAAYSFDELKALTDVLLRHPHVMILTDDMYEHLVYDDFKFVTPAQVEPQLYDRTLTMNGVSKA YCMTGWRIGYAAGPEALIKAIGTLQSQSTSNPSSIAQWAALEALDGPQDFIAENNKVFKERRDLVVSMLNQAKGLHCPKP EGAFYVFPSCAGTIGKKTPEGKVIATDEDFATELLSAEGVAVVHGSAFGLGPAFRISYATATSDLEEACRRIQRFCGALV >Mature_399_residues SLLSSALKRIKPSPTIAISNKARELKATGRDIIALSAGEPDFDTPDNIKEAAIAAIRRGETKYTAVDGMPELKAAICRKF KRENGLDYKPSQVTVGTGGKQVLFNALVATVDAGDEVLIPAPFWVSYPDIVEFCGGKPVSVPTTIEDNFKLRPDVLEAHI TPKTKWLIFNSPSNPSGAAYSFDELKALTDVLLRHPHVMILTDDMYEHLVYDDFKFVTPAQVEPQLYDRTLTMNGVSKAY CMTGWRIGYAAGPEALIKAIGTLQSQSTSNPSSIAQWAALEALDGPQDFIAENNKVFKERRDLVVSMLNQAKGLHCPKPE GAFYVFPSCAGTIGKKTPEGKVIATDEDFATELLSAEGVAVVHGSAFGLGPAFRISYATATSDLEEACRRIQRFCGALV
Specific function: Required for symbiotic nitrogen fixation [H]
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI95147551, Length=365, Percent_Identity=29.3150684931507, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI169881279, Length=365, Percent_Identity=29.3150684931507, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI56713254, Length=315, Percent_Identity=30.7936507936508, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI56713256, Length=315, Percent_Identity=30.7936507936508, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI169881281, Length=271, Percent_Identity=26.9372693726937, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI4507369, Length=401, Percent_Identity=25.6857855361596, Blast_Score=96, Evalue=6e-20, Organism=Escherichia coli, GI1788627, Length=392, Percent_Identity=27.5510204081633, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI1788722, Length=350, Percent_Identity=31.1428571428571, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI1786816, Length=377, Percent_Identity=27.0557029177719, Blast_Score=135, Evalue=5e-33, Organism=Caenorhabditis elegans, GI71994472, Length=362, Percent_Identity=27.9005524861878, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI71994476, Length=362, Percent_Identity=27.9005524861878, Blast_Score=121, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17567369, Length=336, Percent_Identity=25.297619047619, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17567663, Length=382, Percent_Identity=24.6073298429319, Blast_Score=115, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6322401, Length=312, Percent_Identity=28.8461538461538, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6320317, Length=368, Percent_Identity=24.4565217391304, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI28573069, Length=323, Percent_Identity=26.9349845201238, Blast_Score=128, Evalue=8e-30, Organism=Drosophila melanogaster, GI24646114, Length=323, Percent_Identity=26.9349845201238, Blast_Score=128, Evalue=8e-30, Organism=Drosophila melanogaster, GI28573067, Length=323, Percent_Identity=26.9349845201238, Blast_Score=128, Evalue=8e-30, Organism=Drosophila melanogaster, GI28573065, Length=323, Percent_Identity=26.9349845201238, Blast_Score=128, Evalue=8e-30, Organism=Drosophila melanogaster, GI18859735, Length=385, Percent_Identity=25.974025974026, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI24641770, Length=408, Percent_Identity=25.2450980392157, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24641760, Length=408, Percent_Identity=25.2450980392157, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24641768, Length=408, Percent_Identity=25.2450980392157, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24641766, Length=408, Percent_Identity=25.2450980392157, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24641764, Length=408, Percent_Identity=25.2450980392157, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI45551451, Length=408, Percent_Identity=25.2450980392157, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 43423; Mature: 43292
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLSSALKRIKPSPTIAISNKARELKATGRDIIALSAGEPDFDTPDNIKEAAIAAIRRG CHHHHHHHHHCCCCCCEEECCCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC ETKYTAVDGMPELKAAICRKFKRENGLDYKPSQVTVGTGGKQVLFNALVATVDAGDEVLI CCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEE PAPFWVSYPDIVEFCGGKPVSVPTTIEDNFKLRPDVLEAHITPKTKWLIFNSPSNPSGAA CCCCCCCCHHHHHHHCCCCCCCCCEECCCCCCCCHHHHEECCCCEEEEEEECCCCCCCCC YSFDELKALTDVLLRHPHVMILTDDMYEHLVYDDFKFVTPAQVEPQLYDRTLTMNGVSKA CCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCCCCCCCHHHHCCEEEECCCCHH YCMTGWRIGYAAGPEALIKAIGTLQSQSTSNPSSIAQWAALEALDGPQDFIAENNKVFKE HHHCCCEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCHHHHH RRDLVVSMLNQAKGLHCPKPEGAFYVFPSCAGTIGKKTPEGKVIATDEDFATELLSAEGV HHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCE AVVHGSAFGLGPAFRISYATATSDLEEACRRIQRFCGALV EEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SLLSSALKRIKPSPTIAISNKARELKATGRDIIALSAGEPDFDTPDNIKEAAIAAIRRG HHHHHHHHHCCCCCCEEECCCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC ETKYTAVDGMPELKAAICRKFKRENGLDYKPSQVTVGTGGKQVLFNALVATVDAGDEVLI CCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEE PAPFWVSYPDIVEFCGGKPVSVPTTIEDNFKLRPDVLEAHITPKTKWLIFNSPSNPSGAA CCCCCCCCHHHHHHHCCCCCCCCCEECCCCCCCCHHHHEECCCCEEEEEEECCCCCCCCC YSFDELKALTDVLLRHPHVMILTDDMYEHLVYDDFKFVTPAQVEPQLYDRTLTMNGVSKA CCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCCCCCCCHHHHCCEEEECCCCHH YCMTGWRIGYAAGPEALIKAIGTLQSQSTSNPSSIAQWAALEALDGPQDFIAENNKVFKE HHHCCCEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCHHHHH RRDLVVSMLNQAKGLHCPKPEGAFYVFPSCAGTIGKKTPEGKVIATDEDFATELLSAEGV HHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCE AVVHGSAFGLGPAFRISYATATSDLEEACRRIQRFCGALV EEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2019560; 8096210; 11481430 [H]