| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is hisZ [H]
Identifier: 158424741
GI number: 158424741
Start: 3568642
End: 3569958
Strand: Direct
Name: hisZ [H]
Synonym: AZC_3117
Alternate gene names: 158424741
Gene position: 3568642-3569958 (Clockwise)
Preceding gene: 158424739
Following gene: 158424742
Centisome position: 66.46
GC content: 70.08
Gene sequence:
>1317_bases ATGCTTGCGCTCCTTATATCGGAGCACTGCGCCGCCCTTAAGGCGCCATCGGCTGTCACAGGGTGGTCGCGGACGCCGAG CTTTGCTAGAAGCCCGCACGAAACCTCAAGCGGGCGACCGTCCCGCATCTGCGGCCCCGGCCGCCCACAACGATCAAGAG CCGCAATGCCGATCGAGGCACAAAGCCCTCCCCTCCTCCGCGACAGCAGCGCGCTCGACGAAGCGCTGATGGCGCGCTTC GCCTCCGCCGGCTTCCTGCGGCTGGACCCGCCCATCCTGCAGCCGGCGGACGCCTTCCTCGACCTGTCGGGCGAAACCAT CCGCCGCAGCATGTTCCTCACCAGCGGCGAGGACGGGCAGGAACTGTGCCTGCGTCCGGACCTCACCATCCCGGTGGCCC GCGAGGTGCAGCGCCTGCACCTGCCCATGCCGGCGGCCGTCTCCTACCTCGGCCCGGTGTTCCGCTCCCATTCCGGGGGC GCCGGCGAATTCCGTCAGGCGGGTGTGGAATCCTTCGGCCGCGCCGACACGGCGGCGGCGGATGCGGACATTCTGGCCCT CGGCCTTGAGACCTGCGCCATCTATGGCGTGCCGGATCCGGAAATCCTGATCGGCGACGTGGGGCTGTTCTCGGCGGTGC TGGAAGCCCTGCCGCTCGCCCCGGCCTGGCGCCGCCGCCTGATGAAGGACTTCGGGCAGGGCCGGCTGGACGAGGACATC GCCAACCTGAGCGAGAGCGAGGCCAAGGGCACCGCCGCCGTCCATGCGGGCGTGCTCTCGGCTCTGGCCGGCTCCGATCC GGACGCCGCCCGCGCGCTCATCACCGATCTTCTGTCCATCGCCGGCATCACCACGGTGGGCGGGCGCACGGTTTCCGAGA TCGCCGCCCGCTTCCTGGAGCAGGCGGCGCTGGAAGGCAACGGCCTCTCGGCCGAGACGGCCGCCATCCTCTCGCGCTAT CTGGCCATCACCGGCGCCCCCGGCCCGGCGCTGGAACAGGTGCGCGCGCTGGCAAACGAAGCCCGGATCGACATTTCCGG CGCGCTGGCCGCCTTCGAGGAGCGGGCGAGCCATCTGGCTGCGCATGGGGTGAACCTGTCGGAAGTGGAATTCTCCGCCG CCTTCGGTCGGCCGCTCGATTATTACAGCGGCATGGTGTTCGAACTCAGCGATCCGGAAGGGCGCGTGGCTGCCCCGCTG GTGGCCGGCGGGCGCTATGACCGCCTGATGAGCCGCCTCGGCGCCGAAACCGTGGTGCCGGCCGTTGGATTTGCCGCGTG GGTGGAACGTCTCGCCCTGCTGGAGAGCCAGTCATGA
Upstream 100 bases:
>100_bases CCGCCTCGAAGGAGAGGGTGGACACGGCGGGACCGGCTGCGGCCTTGGTCTTGGCGTCCGTCTTGCTGGTCTCGGCCATG GGCTGTCCTTCCGAATCTCA
Downstream 100 bases:
>100_bases GCGACACGCTGATCCTTGCCGTTCCCTCCAAGGGCCGCCTTCAGGAAAACGTCCACGCCTTCTTCGCCCGCGCGGGGATG CCGCTGGTGCAGGCGCGCGG
Product: ATP phosphoribosyltransferase regulatory subunit
Products: AMP; diphosphate +L-histidyl-tRNAHis [C]
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MLALLISEHCAALKAPSAVTGWSRTPSFARSPHETSSGRPSRICGPGRPQRSRAAMPIEAQSPPLLRDSSALDEALMARF ASAGFLRLDPPILQPADAFLDLSGETIRRSMFLTSGEDGQELCLRPDLTIPVAREVQRLHLPMPAAVSYLGPVFRSHSGG AGEFRQAGVESFGRADTAAADADILALGLETCAIYGVPDPEILIGDVGLFSAVLEALPLAPAWRRRLMKDFGQGRLDEDI ANLSESEAKGTAAVHAGVLSALAGSDPDAARALITDLLSIAGITTVGGRTVSEIAARFLEQAALEGNGLSAETAAILSRY LAITGAPGPALEQVRALANEARIDISGALAAFEERASHLAAHGVNLSEVEFSAAFGRPLDYYSGMVFELSDPEGRVAAPL VAGGRYDRLMSRLGAETVVPAVGFAAWVERLALLESQS
Sequences:
>Translated_438_residues MLALLISEHCAALKAPSAVTGWSRTPSFARSPHETSSGRPSRICGPGRPQRSRAAMPIEAQSPPLLRDSSALDEALMARF ASAGFLRLDPPILQPADAFLDLSGETIRRSMFLTSGEDGQELCLRPDLTIPVAREVQRLHLPMPAAVSYLGPVFRSHSGG AGEFRQAGVESFGRADTAAADADILALGLETCAIYGVPDPEILIGDVGLFSAVLEALPLAPAWRRRLMKDFGQGRLDEDI ANLSESEAKGTAAVHAGVLSALAGSDPDAARALITDLLSIAGITTVGGRTVSEIAARFLEQAALEGNGLSAETAAILSRY LAITGAPGPALEQVRALANEARIDISGALAAFEERASHLAAHGVNLSEVEFSAAFGRPLDYYSGMVFELSDPEGRVAAPL VAGGRYDRLMSRLGAETVVPAVGFAAWVERLALLESQS >Mature_438_residues MLALLISEHCAALKAPSAVTGWSRTPSFARSPHETSSGRPSRICGPGRPQRSRAAMPIEAQSPPLLRDSSALDEALMARF ASAGFLRLDPPILQPADAFLDLSGETIRRSMFLTSGEDGQELCLRPDLTIPVAREVQRLHLPMPAAVSYLGPVFRSHSGG AGEFRQAGVESFGRADTAAADADILALGLETCAIYGVPDPEILIGDVGLFSAVLEALPLAPAWRRRLMKDFGQGRLDEDI ANLSESEAKGTAAVHAGVLSALAGSDPDAARALITDLLSIAGITTVGGRTVSEIAARFLEQAALEGNGLSAETAAILSRY LAITGAPGPALEQVRALANEARIDISGALAAFEERASHLAAHGVNLSEVEFSAAFGRPLDYYSGMVFELSDPEGRVAAPL VAGGRYDRLMSRLGAETVVPAVGFAAWVERLALLESQS
Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine [H]
COG id: COG3705
COG function: function code E; ATP phosphoribosyltransferase involved in histidine biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR004516 [H]
Pfam domain/function: PF00587 tRNA-synt_2b [H]
EC number: 6.1.1.21 [C]
Molecular weight: Translated: 45986; Mature: 45986
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALLISEHCAALKAPSAVTGWSRTPSFARSPHETSSGRPSRICGPGRPQRSRAAMPIEA CEEEEEHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QSPPLLRDSSALDEALMARFASAGFLRLDPPILQPADAFLDLSGETIRRSMFLTSGEDGQ CCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHCCCCHHHHHHHHEECCCCCH ELCLRPDLTIPVAREVQRLHLPMPAAVSYLGPVFRSHSGGAGEFRQAGVESFGRADTAAA HEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHC DADILALGLETCAIYGVPDPEILIGDVGLFSAVLEALPLAPAWRRRLMKDFGQGRLDEDI CHHHHHHHHHHHEEECCCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHH ANLSESEAKGTAAVHAGVLSALAGSDPDAARALITDLLSIAGITTVGGRTVSEIAARFLE HHCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHH QAALEGNGLSAETAAILSRYLAITGAPGPALEQVRALANEARIDISGALAAFEERASHLA HHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AHGVNLSEVEFSAAFGRPLDYYSGMVFELSDPEGRVAAPLVAGGRYDRLMSRLGAETVVP HCCCCHHHHHHHHHCCCCHHHHCCEEEEECCCCCCEECHHHCCCHHHHHHHHHCCHHHHH AVGFAAWVERLALLESQS HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLALLISEHCAALKAPSAVTGWSRTPSFARSPHETSSGRPSRICGPGRPQRSRAAMPIEA CEEEEEHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QSPPLLRDSSALDEALMARFASAGFLRLDPPILQPADAFLDLSGETIRRSMFLTSGEDGQ CCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHCCCCHHHHHHHHEECCCCCH ELCLRPDLTIPVAREVQRLHLPMPAAVSYLGPVFRSHSGGAGEFRQAGVESFGRADTAAA HEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHC DADILALGLETCAIYGVPDPEILIGDVGLFSAVLEALPLAPAWRRRLMKDFGQGRLDEDI CHHHHHHHHHHHEEECCCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHH ANLSESEAKGTAAVHAGVLSALAGSDPDAARALITDLLSIAGITTVGGRTVSEIAARFLE HHCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHH QAALEGNGLSAETAAILSRYLAITGAPGPALEQVRALANEARIDISGALAAFEERASHLA HHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AHGVNLSEVEFSAAFGRPLDYYSGMVFELSDPEGRVAAPLVAGGRYDRLMSRLGAETVVP HCCCCHHHHHHHHHCCCCHHHHCCEEEEECCCCCCEECHHHCCCHHHHHHHHHCCHHHHH AVGFAAWVERLALLESQS HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): 8520 [C]
Specific activity: 121.8
Km value (mM): 0.06 {His}} 0.046 {His}} 0.03 {His}} 0.02 {His}} 0.017 {His}} 0.011 {His}} 0.008 {His}} 0.0014 {tRNAHis}} 0.00056 {tRNAHis}} 0.0016 {U73tRNAHisGUG}} 0.00031 {U73tRNAHisGUG}} 0.89 {ATP}} 0.74 {ATP}} 0.655 {ATP}} 0.5
Substrates: ATP; @HIST01.txt*L-histidine!; tRNAHis [C]
Specific reaction: ATP + @HIST01.txt*L-histidine! + tRNAHis = AMP + diphosphate +L-histidyl-tRNAHis [C]
General reaction: Aminoacylation; Esterification [C]
Inhibitor: 1, 2, 4-Triazole-3-alanine; D-Histidine; Diphosphate; L-Histidinol; Mg2+; N-Acetyl histidine; NEM; p-Chloromercuribenzoate [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA