| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424738
Identifier: 158424738
GI number: 158424738
Start: 3566322
End: 3567614
Strand: Direct
Name: 158424738
Synonym: AZC_3114
Alternate gene names: NA
Gene position: 3566322-3567614 (Clockwise)
Preceding gene: 158424734
Following gene: 158424739
Centisome position: 66.41
GC content: 66.67
Gene sequence:
>1293_bases ATGTCGCCACCCCACCAAGGCACCACAATCCGCCGCCACCTTTTCTTTGTGGCCGGCTACGATCCCATGACCGCGGATGC CCACCACGGCATCTTCACGCGCGAGCTTGCGCGCTTTGCGGACGTGTGGGGGATCAAGGCGCGGGTGGACAGCGTGCCCC GCGCGAAGCGCACCGGTGCCACTTGGACGGCGCGCAGCGAGGGACCCGGCTGGTCCACCGAAACGAACTTCGAAATTCTA GCCTGGGACGATCTGGTGCGGCGCGACATGAACCGCAGCCGCTGGTCGCATCTGGGCGGCACGATCCGCGCCCTTGCCGA CATGATCGGCTCGGGGACGCTGTTCCGCTATTTCGGCACCAGCCACCGCTACGGCATCTTCTTCTGCCTCACCTATCTGA CGCTGGCCGCCATCTGGGCGGTGGCCGTGGGCCTGGGCTTTGCCGCCACGGCCTATGCCCGGCCGGTGGTGAGCGATGCG CTGATCGGCTCCTTCTACGCCTTCAACGGCCAGACCGGGAAATGGGTGGCCGTGGCAGCGGGAGTGGCGACGACGCTCAT CGGCGGCTTCGGCCTGATGAAGCTTCTCAACAAGCGGTTTCGGCTCCGGCAATCCCTCGATCTTGCGGAATTTTCGGTGG ACTTCGCCCATGACCGGCACCCCGAGATCAAGGAGCGCATCACCGCCTTTGCGGACCGCGTGCATGCGGTGATGGCCTTC GGCGGCGTGGACGAGATCATCATCGCCGGCCACAGCCTCGGCGCCATGCATGCCATCAGCCTCGTGGCGCGGGCGCTGCG GGACGATCCGAACTTCGGCACCAAGATCCCCATCCGCATCCTGACGCTGGGCTCCACCATCGCGAAATTCGCCCTCCATC CGGCGGCCGACCGGCTTCGCGGCGCGACGCGCACGGTCTCCAAGGCCACCGCCGTCGGCTGGACGGAATATCAGGCCCGC GACGACATCGTATCCTTCTACAAGGTGGACCCGGTGACGCTCGGGCGCATCTCGGACGGCGACCCCAACCGCCGGCCGCT GGTGCGGCGCGTGGCCATCCGCTCCATGCTGACACCGAAGACCTATGCCCGCTTCCGCACCGATGTCATGCGGCTGCACT GCCAGTTCTTCCTCGCGAACGACCGGCGGGCGCCTTATGATTTCTATGCGTTCGTGTGCGCGCCGGTGCCCTACGACACG CTCGTCGGATCGCCAGAAGGGCCACTTTCCGTGCTTGCGGAGGATGGCAGCCTGCTTGCGCCGCCGCCGGTGACGCAGCA AAAGGGCGCATGA
Upstream 100 bases:
>100_bases GCCCTTCGGCGGCATAGGTAGCACCGCAGCGCCGCAGATCAAGCCGAGAAGCCGGGAAGCCGCTTTGCGCCGCGGCAAGC CTGCTTTAGATTGCGCCGCC
Downstream 100 bases:
>100_bases TTTCGCTTCCCCTGCTCGCTCACCCGGTTTCCCTCGTCACCCTCGCCAAGTGCATCTGGGCCCTGGGCGTGGTGTCCTGG TATCTGCTGCGTCTGCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSPPHQGTTIRRHLFFVAGYDPMTADAHHGIFTRELARFADVWGIKARVDSVPRAKRTGATWTARSEGPGWSTETNFEIL AWDDLVRRDMNRSRWSHLGGTIRALADMIGSGTLFRYFGTSHRYGIFFCLTYLTLAAIWAVAVGLGFAATAYARPVVSDA LIGSFYAFNGQTGKWVAVAAGVATTLIGGFGLMKLLNKRFRLRQSLDLAEFSVDFAHDRHPEIKERITAFADRVHAVMAF GGVDEIIIAGHSLGAMHAISLVARALRDDPNFGTKIPIRILTLGSTIAKFALHPAADRLRGATRTVSKATAVGWTEYQAR DDIVSFYKVDPVTLGRISDGDPNRRPLVRRVAIRSMLTPKTYARFRTDVMRLHCQFFLANDRRAPYDFYAFVCAPVPYDT LVGSPEGPLSVLAEDGSLLAPPPVTQQKGA
Sequences:
>Translated_430_residues MSPPHQGTTIRRHLFFVAGYDPMTADAHHGIFTRELARFADVWGIKARVDSVPRAKRTGATWTARSEGPGWSTETNFEIL AWDDLVRRDMNRSRWSHLGGTIRALADMIGSGTLFRYFGTSHRYGIFFCLTYLTLAAIWAVAVGLGFAATAYARPVVSDA LIGSFYAFNGQTGKWVAVAAGVATTLIGGFGLMKLLNKRFRLRQSLDLAEFSVDFAHDRHPEIKERITAFADRVHAVMAF GGVDEIIIAGHSLGAMHAISLVARALRDDPNFGTKIPIRILTLGSTIAKFALHPAADRLRGATRTVSKATAVGWTEYQAR DDIVSFYKVDPVTLGRISDGDPNRRPLVRRVAIRSMLTPKTYARFRTDVMRLHCQFFLANDRRAPYDFYAFVCAPVPYDT LVGSPEGPLSVLAEDGSLLAPPPVTQQKGA >Mature_429_residues SPPHQGTTIRRHLFFVAGYDPMTADAHHGIFTRELARFADVWGIKARVDSVPRAKRTGATWTARSEGPGWSTETNFEILA WDDLVRRDMNRSRWSHLGGTIRALADMIGSGTLFRYFGTSHRYGIFFCLTYLTLAAIWAVAVGLGFAATAYARPVVSDAL IGSFYAFNGQTGKWVAVAAGVATTLIGGFGLMKLLNKRFRLRQSLDLAEFSVDFAHDRHPEIKERITAFADRVHAVMAFG GVDEIIIAGHSLGAMHAISLVARALRDDPNFGTKIPIRILTLGSTIAKFALHPAADRLRGATRTVSKATAVGWTEYQARD DIVSFYKVDPVTLGRISDGDPNRRPLVRRVAIRSMLTPKTYARFRTDVMRLHCQFFLANDRRAPYDFYAFVCAPVPYDTL VGSPEGPLSVLAEDGSLLAPPPVTQQKGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47405; Mature: 47274
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPHQGTTIRRHLFFVAGYDPMTADAHHGIFTRELARFADVWGIKARVDSVPRAKRTGA CCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCHHCCC TWTARSEGPGWSTETNFEILAWDDLVRRDMNRSRWSHLGGTIRALADMIGSGTLFRYFGT CEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEECCC SHRYGIFFCLTYLTLAAIWAVAVGLGFAATAYARPVVSDALIGSFYAFNGQTGKWVAVAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEHH GVATTLIGGFGLMKLLNKRFRLRQSLDLAEFSVDFAHDRHPEIKERITAFADRVHAVMAF HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHH GGVDEIIIAGHSLGAMHAISLVARALRDDPNFGTKIPIRILTLGSTIAKFALHPAADRLR CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCHHHHHC GATRTVSKATAVGWTEYQARDDIVSFYKVDPVTLGRISDGDPNRRPLVRRVAIRSMLTPK CHHHHHHHHHHCCCHHHHHHHHHHHHEEECCEEECCCCCCCCCCHHHHHHHHHHHHCCHH TYARFRTDVMRLHCQFFLANDRRAPYDFYAFVCAPVPYDTLVGSPEGPLSVLAEDGSLLA HHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCHHHHCCCCCCCCEEEECCCCEEC PPPVTQQKGA CCCCCCCCCC >Mature Secondary Structure SPPHQGTTIRRHLFFVAGYDPMTADAHHGIFTRELARFADVWGIKARVDSVPRAKRTGA CCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCHHCCC TWTARSEGPGWSTETNFEILAWDDLVRRDMNRSRWSHLGGTIRALADMIGSGTLFRYFGT CEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEECCC SHRYGIFFCLTYLTLAAIWAVAVGLGFAATAYARPVVSDALIGSFYAFNGQTGKWVAVAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEHH GVATTLIGGFGLMKLLNKRFRLRQSLDLAEFSVDFAHDRHPEIKERITAFADRVHAVMAF HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHH GGVDEIIIAGHSLGAMHAISLVARALRDDPNFGTKIPIRILTLGSTIAKFALHPAADRLR CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCHHHHHC GATRTVSKATAVGWTEYQARDDIVSFYKVDPVTLGRISDGDPNRRPLVRRVAIRSMLTPK CHHHHHHHHHHCCCHHHHHHHHHHHHEEECCEEECCCCCCCCCCHHHHHHHHHHHHCCHH TYARFRTDVMRLHCQFFLANDRRAPYDFYAFVCAPVPYDTLVGSPEGPLSVLAEDGSLLA HHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCHHHHCCCCCCCCEEEECCCCEEC PPPVTQQKGA CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA