| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is aroQ
Identifier: 158424697
GI number: 158424697
Start: 3513749
End: 3514192
Strand: Direct
Name: aroQ
Synonym: AZC_3073
Alternate gene names: 158424697
Gene position: 3513749-3514192 (Clockwise)
Preceding gene: 158424696
Following gene: 158424698
Centisome position: 65.44
GC content: 68.47
Gene sequence:
>444_bases ATGTCCGACACCATCCACGTCCTCAACGGACCCAATCTGAACCTCCTCGGCACCCGCGAGCCCGGCATCTACGGTGCCGC GACGCTGGCCGACGTTGAGGCGCTCTGCCGCACGACCGCGGCCCAGCACGGGCTCGAGCTCGTCTTCCGCCAGAGCAATC ACGAAGGCGATCTGGTGGACTGGATCCAGGCTGCGGCAGGCTCCGTCGGCGTGGTCCTGAATGCCGGCGCCTATACCCAC ACCTCCGTCGCGTTGCGCGATGCCATTGCCGGCACCGGCGTTCCCGCCGTCGAGGTGCATCTGTCGAACGTGTTCGCCCG CGAACCCTTCCGTCACCATTCCTATCTCTCGCCGGTGGTGCGGGGCGTGATCTGCGGCTTCGGGCCCCAGAGCTACGTCC TCGGCATCACGGCGCTCGCCACAACCCGGCCGGCGCGCCCCTGA
Upstream 100 bases:
>100_bases GGTCTGGTGAATGGGGTGAGATGGCGTCTTTCCTTGCGACGCAACGCCCCCTATAACCGCGCGGGCCCGGACGCTGCCGG GTCGCAGCTGAACCGTCAGG
Downstream 100 bases:
>100_bases GCGCGGCCCTCACCCTTCAGGAGCTCATGCGTGGCTGAACCCGCGTACGTGCAGGATGAAATGAAAAACTCCAAGACCCC CATCGATACCGACGTCATCC
Product: 3-dehydroquinate dehydratase
Products: NA
Alternate protein names: 3-dehydroquinase; Type II DHQase
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSDTIHVLNGPNLNLLGTREPGIYGAATLADVEALCRTTAAQHGLELVFRQSNHEGDLVDWIQAAAGSVGVVLNAGAYTH TSVALRDAIAGTGVPAVEVHLSNVFAREPFRHHSYLSPVVRGVICGFGPQSYVLGITALATTRPARP
Sequences:
>Translated_147_residues MSDTIHVLNGPNLNLLGTREPGIYGAATLADVEALCRTTAAQHGLELVFRQSNHEGDLVDWIQAAAGSVGVVLNAGAYTH TSVALRDAIAGTGVPAVEVHLSNVFAREPFRHHSYLSPVVRGVICGFGPQSYVLGITALATTRPARP >Mature_146_residues SDTIHVLNGPNLNLLGTREPGIYGAATLADVEALCRTTAAQHGLELVFRQSNHEGDLVDWIQAAAGSVGVVLNAGAYTHT SVALRDAIAGTGVPAVEVHLSNVFAREPFRHHSYLSPVVRGVICGFGPQSYVLGITALATTRPARP
Specific function: Catalyzes a trans-dehydration via an enolate intermediate
COG id: COG0757
COG function: function code E; 3-dehydroquinate dehydratase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type-II 3-dehydroquinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROQ_AZOC5 (A8IBI0)
Other databases:
- EMBL: AP009384 - RefSeq: YP_001525989.1 - ProteinModelPortal: A8IBI0 - SMR: A8IBI0 - GeneID: 5691225 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_3073 - HOGENOM: HBG284657 - OMA: GWLHEAA - ProtClustDB: PRK05395 - BioCyc: ACAU438753:AZC_3073-MONOMER - HAMAP: MF_00169 - InterPro: IPR001874 - InterPro: IPR018509 - Gene3D: G3DSA:3.40.50.9100 - PANTHER: PTHR21272 - PIRSF: PIRSF001399 - ProDom: PD004527 - TIGRFAMs: TIGR01088
Pfam domain/function: PF01220 DHquinase_II; SSF52304 DHquinase_II
EC number: =4.2.1.10
Molecular weight: Translated: 15451; Mature: 15319
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS01029 DEHYDROQUINASE_II
Important sites: ACT_SITE 24-24 ACT_SITE 100-100 BINDING 74-74 BINDING 80-80 BINDING 87-87 BINDING 111-111
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTIHVLNGPNLNLLGTREPGIYGAATLADVEALCRTTAAQHGLELVFRQSNHEGDLVD CCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHH WIQAAAGSVGVVLNAGAYTHTSVALRDAIAGTGVPAVEVHLSNVFAREPFRHHSYLSPVV HHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCHHHHHHHHHHH RGVICGFGPQSYVLGITALATTRPARP HHHHHCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDTIHVLNGPNLNLLGTREPGIYGAATLADVEALCRTTAAQHGLELVFRQSNHEGDLVD CCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHH WIQAAAGSVGVVLNAGAYTHTSVALRDAIAGTGVPAVEVHLSNVFAREPFRHHSYLSPVV HHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCHHHHHHHHHHH RGVICGFGPQSYVLGITALATTRPARP HHHHHCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA