| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is pyrG [H]
Identifier: 158424691
GI number: 158424691
Start: 3505322
End: 3506950
Strand: Reverse
Name: pyrG [H]
Synonym: AZC_3067
Alternate gene names: 158424691
Gene position: 3506950-3505322 (Counterclockwise)
Preceding gene: 158424692
Following gene: 158424690
Centisome position: 65.31
GC content: 65.93
Gene sequence:
>1629_bases ATGGCGCGCTACATCTTCATCACCGGCGGCGTCGTGTCCTCCCTTGGCAAGGGCCTCGCCTCCGCAGCACTCGGCGCGCT TCTTCAGGCGCGCGGGTACACCGTCCGGCTCCGCAAGCTGGACCCCTATCTGAACGTCGATCCGGGCACCATGAGCCCGT ATCAGCATGGCGAGGTCTTCGTGACCGACGACGGGGCCGAGACCGATCTCGACCTCGGCCATTACGAGCGCTTCACCGGG CATCCTGCCACCAAGCAGGACAACATCACCACCGGGCGCATCTATCAGGACATCCTCACCAAGGAGCGGCGCGGCGACTA TCTGGGCGCCACCATCCAGGTGATTCCCCACGTCACCAACGCCATCAAGGACTTCGTGCTGGAAGGCAACGAGGGCTTCG ACTTCGTGCTCATCGAGGTCGGCGGCACGGTGGGTGACATCGAGGGCCTGCCCTTCTTCGAGGCGACCCGTCAGCTCAAG AACGAGCTGCCGCGCAACCACGCCATCTTCATCCACCTGACGCTGATGCCCTTCATCCCCTCCGCCGGGGAACTGAAGAC CAAGCCGACGCAGCACTCCGTCAAGGAACTGCGCTCCATCGGCATCCAGCCCGACATCCTGCTCTGCCGCTGCGATCGCG AGATCCCGCGCGAGGAGCGGCGCAAGCTCTCGCTCTTCTGCAACGTGCGCGAGAGCGCCGTGATCGAGGCGCGCGACGTG GACAACATCTACGCCGTGCCGTCCTCCTACCATGCGGAAGGTCTCGACACGGAAGTGCTGGCCGCCTTCGGCATCGAGCC GGCCCCGGCGCCGAACCTCCAGCGCTGGACCAATATCGAGCAGCGCGTGCGCAACCCCGAGGGCGAAGTGACCATCGCCA TCGTGGGCAAGTACACGGGCCTCAAGGACGCCTACAAGTCGCTCATCGAGGCGCTGAACCACGGCGGCATCGCCAACAAG GTGAAGGTGAACCTCGACTGGATCGAGAGCGAGACCTTCGAGACCGAGGACCCGGCGCCCTTCCTGGAGCATGTCCACGG CATTCTCGTGCCGGGCGGCTTCGGCCAGCGCGGCGCCGAGGGCAAGATCCGCGCGGCCCAGTTCGCCCGCGAGCGCAAGG TGCCCTATTTCGGCATCTGCTTCGGCATGCAGATGGCCGTGATCGAGGCGGCCCGGAACCTGGCCGGCGTCAAGAACGCC AACTCCACCGAGTTCGGCGAGACGTCCGAGCCGGTGGTGGGCCTGCTCACCGAATGGCTGAAGGGCAATGAACTGGAGCG CCGCTCGGCAGCGGGCGACCTCGGCGGCACCATGCGCCTCGGCGCCTATCTGGCGCAGCTCAAGGAGCCGTCCCGCGTCG CCGGCATCTATGGCGCGCAGGAGATTTCCGAGCGTCACCGTCACCGTTACGAGGTGAATACCGCCTACAAGGATCGCCTC GAGGCCTGCGGTCTCATGTTCTCCGGCCTGTCGCCCGATGGCCTGCTGCCGGAGATCGTGGAATATGCGGACCATCCCTG GTTCATCGGCGTGCAGTTCCATCCCGAGCTGAAGTCGCGCCCGTTCCAGCCGCATCCGCTCTTCGCCTCCTTCATCGGGG CGGCCATGGAGCAGAGCCGGCTGGTGTGA
Upstream 100 bases:
>100_bases CGCGGCAGGCCGCGGCGTGTAGGTTCTCCACAGGCGACGCGGTGCCCCAAAGGGCGTCGCGCTCGCCGAATCGCGTTTGC GCGGAGTAGAGTTGAAGCCC
Downstream 100 bases:
>100_bases GTGAGCCTGCCGCTCCGGCGTGAAGCCGGGCGGCGTGCGATCAGGTAAAGGAGTTGCCCATGCGTCGCGGCCTCGATCAC GTCGTCCATCTGGTGCGGGA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MARYIFITGGVVSSLGKGLASAALGALLQARGYTVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTG HPATKQDNITTGRIYQDILTKERRGDYLGATIQVIPHVTNAIKDFVLEGNEGFDFVLIEVGGTVGDIEGLPFFEATRQLK NELPRNHAIFIHLTLMPFIPSAGELKTKPTQHSVKELRSIGIQPDILLCRCDREIPREERRKLSLFCNVRESAVIEARDV DNIYAVPSSYHAEGLDTEVLAAFGIEPAPAPNLQRWTNIEQRVRNPEGEVTIAIVGKYTGLKDAYKSLIEALNHGGIANK VKVNLDWIESETFETEDPAPFLEHVHGILVPGGFGQRGAEGKIRAAQFARERKVPYFGICFGMQMAVIEAARNLAGVKNA NSTEFGETSEPVVGLLTEWLKGNELERRSAAGDLGGTMRLGAYLAQLKEPSRVAGIYGAQEISERHRHRYEVNTAYKDRL EACGLMFSGLSPDGLLPEIVEYADHPWFIGVQFHPELKSRPFQPHPLFASFIGAAMEQSRLV
Sequences:
>Translated_542_residues MARYIFITGGVVSSLGKGLASAALGALLQARGYTVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTG HPATKQDNITTGRIYQDILTKERRGDYLGATIQVIPHVTNAIKDFVLEGNEGFDFVLIEVGGTVGDIEGLPFFEATRQLK NELPRNHAIFIHLTLMPFIPSAGELKTKPTQHSVKELRSIGIQPDILLCRCDREIPREERRKLSLFCNVRESAVIEARDV DNIYAVPSSYHAEGLDTEVLAAFGIEPAPAPNLQRWTNIEQRVRNPEGEVTIAIVGKYTGLKDAYKSLIEALNHGGIANK VKVNLDWIESETFETEDPAPFLEHVHGILVPGGFGQRGAEGKIRAAQFARERKVPYFGICFGMQMAVIEAARNLAGVKNA NSTEFGETSEPVVGLLTEWLKGNELERRSAAGDLGGTMRLGAYLAQLKEPSRVAGIYGAQEISERHRHRYEVNTAYKDRL EACGLMFSGLSPDGLLPEIVEYADHPWFIGVQFHPELKSRPFQPHPLFASFIGAAMEQSRLV >Mature_541_residues ARYIFITGGVVSSLGKGLASAALGALLQARGYTVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGH PATKQDNITTGRIYQDILTKERRGDYLGATIQVIPHVTNAIKDFVLEGNEGFDFVLIEVGGTVGDIEGLPFFEATRQLKN ELPRNHAIFIHLTLMPFIPSAGELKTKPTQHSVKELRSIGIQPDILLCRCDREIPREERRKLSLFCNVRESAVIEARDVD NIYAVPSSYHAEGLDTEVLAAFGIEPAPAPNLQRWTNIEQRVRNPEGEVTIAIVGKYTGLKDAYKSLIEALNHGGIANKV KVNLDWIESETFETEDPAPFLEHVHGILVPGGFGQRGAEGKIRAAQFARERKVPYFGICFGMQMAVIEAARNLAGVKNAN STEFGETSEPVVGLLTEWLKGNELERRSAAGDLGGTMRLGAYLAQLKEPSRVAGIYGAQEISERHRHRYEVNTAYKDRLE ACGLMFSGLSPDGLLPEIVEYADHPWFIGVQFHPELKSRPFQPHPLFASFIGAAMEQSRLV
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=558, Percent_Identity=44.8028673835125, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI28559085, Length=555, Percent_Identity=44.1441441441441, Blast_Score=453, Evalue=1e-127, Organism=Homo sapiens, GI28559083, Length=555, Percent_Identity=44.1441441441441, Blast_Score=453, Evalue=1e-127, Organism=Homo sapiens, GI221316689, Length=555, Percent_Identity=44.1441441441441, Blast_Score=453, Evalue=1e-127, Organism=Escherichia coli, GI1789142, Length=536, Percent_Identity=58.955223880597, Blast_Score=623, Evalue=1e-180, Organism=Caenorhabditis elegans, GI25148299, Length=612, Percent_Identity=36.7647058823529, Blast_Score=397, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6322563, Length=569, Percent_Identity=40.2460456942003, Blast_Score=428, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6319432, Length=568, Percent_Identity=39.0845070422535, Blast_Score=418, Evalue=1e-117, Organism=Drosophila melanogaster, GI24664469, Length=559, Percent_Identity=43.649373881932, Blast_Score=455, Evalue=1e-128, Organism=Drosophila melanogaster, GI21357815, Length=505, Percent_Identity=42.7722772277228, Blast_Score=390, Evalue=1e-108,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 59980; Mature: 59849
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS00442 GATASE_TYPE_I ; PS00214 FABP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYIFITGGVVSSLGKGLASAALGALLQARGYTVRLRKLDPYLNVDPGTMSPYQHGEVF CCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGHPATKQDNITTGRIYQDILTKERRGDYLGATIQVIPHVTN EECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AIKDFVLEGNEGFDFVLIEVGGTVGDIEGLPFFEATRQLKNELPRNHAIFIHLTLMPFIP HHHHHHCCCCCCCEEEEEEECCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCC SAGELKTKPTQHSVKELRSIGIQPDILLCRCDREIPREERRKLSLFCNVRESAVIEARDV CCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHEEHEEECCHHHEEEECCC DNIYAVPSSYHAEGLDTEVLAAFGIEPAPAPNLQRWTNIEQRVRNPEGEVTIAIVGKYTG CCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCHHHHHCCCCCCEEEEEEECCCC LKDAYKSLIEALNHGGIANKVKVNLDWIESETFETEDPAPFLEHVHGILVPGGFGQRGAE HHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHCCEEEECCCCCCCCCC GKIRAAQFARERKVPYFGICFGMQMAVIEAARNLAGVKNANSTEFGETSEPVVGLLTEWL CCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH KGNELERRSAAGDLGGTMRLGAYLAQLKEPSRVAGIYGAQEISERHRHRYEVNTAYKDRL CCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHEEECCHHHHHHH EACGLMFSGLSPDGLLPEIVEYADHPWFIGVQFHPELKSRPFQPHPLFASFIGAAMEQSR HHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHC LV CC >Mature Secondary Structure ARYIFITGGVVSSLGKGLASAALGALLQARGYTVRLRKLDPYLNVDPGTMSPYQHGEVF CEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGHPATKQDNITTGRIYQDILTKERRGDYLGATIQVIPHVTN EECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AIKDFVLEGNEGFDFVLIEVGGTVGDIEGLPFFEATRQLKNELPRNHAIFIHLTLMPFIP HHHHHHCCCCCCCEEEEEEECCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCC SAGELKTKPTQHSVKELRSIGIQPDILLCRCDREIPREERRKLSLFCNVRESAVIEARDV CCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHEEHEEECCHHHEEEECCC DNIYAVPSSYHAEGLDTEVLAAFGIEPAPAPNLQRWTNIEQRVRNPEGEVTIAIVGKYTG CCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCHHHHHCCCCCCEEEEEEECCCC LKDAYKSLIEALNHGGIANKVKVNLDWIESETFETEDPAPFLEHVHGILVPGGFGQRGAE HHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHCCEEEECCCCCCCCCC GKIRAAQFARERKVPYFGICFGMQMAVIEAARNLAGVKNANSTEFGETSEPVVGLLTEWL CCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH KGNELERRSAAGDLGGTMRLGAYLAQLKEPSRVAGIYGAQEISERHRHRYEVNTAYKDRL CCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHEEECCHHHHHHH EACGLMFSGLSPDGLLPEIVEYADHPWFIGVQFHPELKSRPFQPHPLFASFIGAAMEQSR HHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHC LV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]