| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424679
Identifier: 158424679
GI number: 158424679
Start: 3492692
End: 3494080
Strand: Reverse
Name: 158424679
Synonym: AZC_3055
Alternate gene names: NA
Gene position: 3494080-3492692 (Counterclockwise)
Preceding gene: 158424680
Following gene: 158424676
Centisome position: 65.07
GC content: 64.51
Gene sequence:
>1389_bases ATGCGTTCTTTCTCTCTCACGCTGGCCGTGCTGCTCGCCGGCACGGCTCTCGCGACGTCCCTCAAGGCTGAGGAGACGGC CCGCGCCTATCCGGCGACCGTCGAGGGGCATGTCGTCCTTCCGGCCGCCACCTACATCCAGCCCCCGGCGGATGCGCCGG CCGACCTCAAGGTCGCGGGCAAGTTCACCGCTCCTGATCGCAGCCGCAACGATCAGGTGGGCTCGGTGCCCGGCGTCAGC TTCCTGTCGCCGAAGGATGCGCCGCGCGCCACAGGCATCTCCATGCCGTTCCCCGGTCAGGCCGTGCAGGGCTTCTCCGG CATCGTGAACGAGGGCAACGGCACCTTCCTCGTCATCACCGACAACGGCTTCGGCTCGAAGTTCAATTCGCCGGACGCCA TGCTGATGGTTCACCGCCTCGCCATGGACTTCAAGGCGGGCACCATCGAGCGCAAGGAAACCCTGTTCCTGCGCGATCCC GACAAGAAGGTGCCGTTCCCGATCACCTTCGAGGGCACGCCCCAGCGCTATCTCACCGGCTCGGACTTCGACATCGAGTC CATCCAGAAGGTGGGCGACAGCCTGTGGTTCGGCGAGGAACTGGGGCCGTTCCTGGTGGAGACCGATCTCACCGGCAAAG TGAAGGGCGTCTATGCCACCAAGGTGGACGGCAAGGTCGTGCGCTCGCCGGACAATCCGGCCATCACCACGCCGCCCAAT CCCTCGCGCAAGGTGGCGTTCGAGATCCAGCGCTCCAAGGGCTTCGAGGGCATGGCGCTCTCGCCCGATGGCACCAAGCT CTATGCGCTGCTGGAAGGCCCGGTGCTCAACCCGGAGACGGGTGAGAAGGAGAAGGTGGACGGTGCCGAGGTGCTGCGCA TCCTCGAATTCGATCTGCAGAAGAAGGAGTGGACCGGCCGCTTCTGGAAATATCCGCTCTCCGTCGCGGGCAATGCCATC GGCGATTTCAACATGATCGATGCCACCAGCGGCCTCATCATCGAGCGCGACGACGTCTCCGAGGGCACGCCCTCCAAGCG CTGCCCGGAGGGCAAGGTTGCCTCCGACTGCTTCGACAAGACTGCCCAGTTCAAGCGCGTCTACAAGGTGGAGTTCAGCC CCGAGACCGCCAGCCAGCTGGTGCGCAAGGTCGGCTATATCGACCTGATGGCGCTGAAGGACCCCAACGGCAAGGCTAAG CAGGGCGGCAAGGACGGGATGCTCGACTTCCCCTTCATCACCATCGAGAACGTGGTGATGGTGGACCCCGCCCACATCGT GGTCGGCAACGACAACAACCTGCCGTTTTCGGCCGGTCGCGACCCGAACAAGGCGGACGACAACGAGTTCGTCCTGCTGG AAGTCGGCGAACTGCTGAAGGCGAAGTGA
Upstream 100 bases:
>100_bases GGAGGTAGCCCGGACGCTACGTCATGGGATTGTCGTTTCCCTGTCGCCCGGCTGACATCGCGCAGGGTCAAGAACGCCTC GCCAACAGGAGGCGCTTCCC
Downstream 100 bases:
>100_bases TCGCTCCGGGCGGCGGGCCAAGGCGCGCCGCCCGGACATCATGCCTTCTGCGGTCGGGTTGCCCGGGGGACGCCGCGGCG GAAAACAAAAGAGCCGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; Signal Peptide; Periplasmic Protein; Glycerophosphoryl Diester Phosphodiesterase Family; PEP-CTERM Exosortase Interaction Domain Protein
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MRSFSLTLAVLLAGTALATSLKAEETARAYPATVEGHVVLPAATYIQPPADAPADLKVAGKFTAPDRSRNDQVGSVPGVS FLSPKDAPRATGISMPFPGQAVQGFSGIVNEGNGTFLVITDNGFGSKFNSPDAMLMVHRLAMDFKAGTIERKETLFLRDP DKKVPFPITFEGTPQRYLTGSDFDIESIQKVGDSLWFGEELGPFLVETDLTGKVKGVYATKVDGKVVRSPDNPAITTPPN PSRKVAFEIQRSKGFEGMALSPDGTKLYALLEGPVLNPETGEKEKVDGAEVLRILEFDLQKKEWTGRFWKYPLSVAGNAI GDFNMIDATSGLIIERDDVSEGTPSKRCPEGKVASDCFDKTAQFKRVYKVEFSPETASQLVRKVGYIDLMALKDPNGKAK QGGKDGMLDFPFITIENVVMVDPAHIVVGNDNNLPFSAGRDPNKADDNEFVLLEVGELLKAK
Sequences:
>Translated_462_residues MRSFSLTLAVLLAGTALATSLKAEETARAYPATVEGHVVLPAATYIQPPADAPADLKVAGKFTAPDRSRNDQVGSVPGVS FLSPKDAPRATGISMPFPGQAVQGFSGIVNEGNGTFLVITDNGFGSKFNSPDAMLMVHRLAMDFKAGTIERKETLFLRDP DKKVPFPITFEGTPQRYLTGSDFDIESIQKVGDSLWFGEELGPFLVETDLTGKVKGVYATKVDGKVVRSPDNPAITTPPN PSRKVAFEIQRSKGFEGMALSPDGTKLYALLEGPVLNPETGEKEKVDGAEVLRILEFDLQKKEWTGRFWKYPLSVAGNAI GDFNMIDATSGLIIERDDVSEGTPSKRCPEGKVASDCFDKTAQFKRVYKVEFSPETASQLVRKVGYIDLMALKDPNGKAK QGGKDGMLDFPFITIENVVMVDPAHIVVGNDNNLPFSAGRDPNKADDNEFVLLEVGELLKAK >Mature_462_residues MRSFSLTLAVLLAGTALATSLKAEETARAYPATVEGHVVLPAATYIQPPADAPADLKVAGKFTAPDRSRNDQVGSVPGVS FLSPKDAPRATGISMPFPGQAVQGFSGIVNEGNGTFLVITDNGFGSKFNSPDAMLMVHRLAMDFKAGTIERKETLFLRDP DKKVPFPITFEGTPQRYLTGSDFDIESIQKVGDSLWFGEELGPFLVETDLTGKVKGVYATKVDGKVVRSPDNPAITTPPN PSRKVAFEIQRSKGFEGMALSPDGTKLYALLEGPVLNPETGEKEKVDGAEVLRILEFDLQKKEWTGRFWKYPLSVAGNAI GDFNMIDATSGLIIERDDVSEGTPSKRCPEGKVASDCFDKTAQFKRVYKVEFSPETASQLVRKVGYIDLMALKDPNGKAK QGGKDGMLDFPFITIENVVMVDPAHIVVGNDNNLPFSAGRDPNKADDNEFVLLEVGELLKAK
Specific function: Unknown
COG id: COG4222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50028; Mature: 50028
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSFSLTLAVLLAGTALATSLKAEETARAYPATVEGHVVLPAATYIQPPADAPADLKVAG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEHHCCCCCCCCCCCEEEEE KFTAPDRSRNDQVGSVPGVSFLSPKDAPRATGISMPFPGQAVQGFSGIVNEGNGTFLVIT EECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHCCHHHEECCCCEEEEEE DNGFGSKFNSPDAMLMVHRLAMDFKAGTIERKETLFLRDPDKKVPFPITFEGTPQRYLTG CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEECC SDFDIESIQKVGDSLWFGEELGPFLVETDLTGKVKGVYATKVDGKVVRSPDNPAITTPPN CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEECCCCCEEECCCC PSRKVAFEIQRSKGFEGMALSPDGTKLYALLEGPVLNPETGEKEKVDGAEVLRILEFDLQ CCCEEEEEEECCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCC KKEWTGRFWKYPLSVAGNAIGDFNMIDATSGLIIERDDVSEGTPSKRCPEGKVASDCFDK CHHHCCCCEECCHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH TAQFKRVYKVEFSPETASQLVRKVGYIDLMALKDPNGKAKQGGKDGMLDFPFITIENVVM HHHEEEEEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEECCEEEECCEEE VDPAHIVVGNDNNLPFSAGRDPNKADDNEFVLLEVGELLKAK ECCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCC >Mature Secondary Structure MRSFSLTLAVLLAGTALATSLKAEETARAYPATVEGHVVLPAATYIQPPADAPADLKVAG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEHHCCCCCCCCCCCEEEEE KFTAPDRSRNDQVGSVPGVSFLSPKDAPRATGISMPFPGQAVQGFSGIVNEGNGTFLVIT EECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHCCHHHEECCCCEEEEEE DNGFGSKFNSPDAMLMVHRLAMDFKAGTIERKETLFLRDPDKKVPFPITFEGTPQRYLTG CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEECC SDFDIESIQKVGDSLWFGEELGPFLVETDLTGKVKGVYATKVDGKVVRSPDNPAITTPPN CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEECCCCCEEECCCC PSRKVAFEIQRSKGFEGMALSPDGTKLYALLEGPVLNPETGEKEKVDGAEVLRILEFDLQ CCCEEEEEEECCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCC KKEWTGRFWKYPLSVAGNAIGDFNMIDATSGLIIERDDVSEGTPSKRCPEGKVASDCFDK CHHHCCCCEECCHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH TAQFKRVYKVEFSPETASQLVRKVGYIDLMALKDPNGKAKQGGKDGMLDFPFITIENVVM HHHEEEEEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEECCEEEECCEEE VDPAHIVVGNDNNLPFSAGRDPNKADDNEFVLLEVGELLKAK ECCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA