| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424653
Identifier: 158424653
GI number: 158424653
Start: 3462566
End: 3463447
Strand: Reverse
Name: 158424653
Synonym: AZC_3029
Alternate gene names: NA
Gene position: 3463447-3462566 (Counterclockwise)
Preceding gene: 158424654
Following gene: 158424647
Centisome position: 64.5
GC content: 67.91
Gene sequence:
>882_bases ATGCGGGCTGTTCAGGTCATTGGGAAGGTCGCCCCTCACGCCAAGCCGGAGTATGTCGCCGCATTTGCGCAGGGCGACGC CGCCTTGCTCGCGGCACAGGTCAACACGCCGCTCCGGCTGGCGCACCTTCTGGCGCAGGTACTGCATGAGACCGGCGGGC TGACGATCGTCCGCGAGAGCGGCTCCTATACCGCGCCGCGCATCGAGCAGATTTTCGGCATCGGCCATCACAGCGCGGCA GTGACGCCCATCGAGGCTCGGCAACTCGCCGGCAATGGGGTTGCCCTGTTCGAGCGTGTCTATGGGCTTGGCAATCCGTC CATGGCGCGGCAACTGGGCAATACCCAGCCGGGCGATGGCTGGGCCTACCGGGGCAACGGCCTGCTTCAGACGACGGGGC GCGGCCAGCACCGCGAGATGGGCCGGCTTTCCGGCGTGGGCGACCTCTTCGAGGAGGACCCGACCCAGGTGATCCATCCC GAGCATGCGCTGAAGCCGGCGCTGGCGGAATGGACGCGCGGGGCCTGCAACCTGCTCGCGGACCAGGGGAATGTCCGCCA GCTCACCCGCACGATCAACGGCGGCTACAATGGCTATGCCGAGCGTGTCGCGTGGCTGAACAGGATCTGGGCGGTGCTCG GGACCGGGGCACCGTGGGAAGCCGCAGCGCCGGAATTTTCCGTGTCCGATCTCCAGTCCAAGCTCAATCGTCTCGGCTAT CGTCTCACCGCGGACGGACGCTATGGCCCGAAGACGGAAGAGGCCGTCCGTGACTTCCAGTCGAAGAACGACCTGAAGAC GGACGGCATTGCCGGGCCGGTCACGCTGGCAGCGCTGGAGGCCCGGCTCCTGCCCGCCCTGGCGGAACGCAGCGCCGCCT GA
Upstream 100 bases:
>100_bases CGGCAGTAGTCCGGTGCGCGGGAGCCTTGCTCCGGAGTTCCCATGTGCGTCGAATACTTTGGAAATTTAAACTCAAGTGC ATTGACCACTGGAGCGTCAC
Downstream 100 bases:
>100_bases GGTGCTGCGCCTCCAGGCCTATTGCGGGCGCTTCGGTACGCTCGCGAGGAAGGCCCGCAGGTCGTCGCTCCACAGGCGCG CGATGACCGTGGTGCCATGG
Product: chitinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MRAVQVIGKVAPHAKPEYVAAFAQGDAALLAAQVNTPLRLAHLLAQVLHETGGLTIVRESGSYTAPRIEQIFGIGHHSAA VTPIEARQLAGNGVALFERVYGLGNPSMARQLGNTQPGDGWAYRGNGLLQTTGRGQHREMGRLSGVGDLFEEDPTQVIHP EHALKPALAEWTRGACNLLADQGNVRQLTRTINGGYNGYAERVAWLNRIWAVLGTGAPWEAAAPEFSVSDLQSKLNRLGY RLTADGRYGPKTEEAVRDFQSKNDLKTDGIAGPVTLAALEARLLPALAERSAA
Sequences:
>Translated_293_residues MRAVQVIGKVAPHAKPEYVAAFAQGDAALLAAQVNTPLRLAHLLAQVLHETGGLTIVRESGSYTAPRIEQIFGIGHHSAA VTPIEARQLAGNGVALFERVYGLGNPSMARQLGNTQPGDGWAYRGNGLLQTTGRGQHREMGRLSGVGDLFEEDPTQVIHP EHALKPALAEWTRGACNLLADQGNVRQLTRTINGGYNGYAERVAWLNRIWAVLGTGAPWEAAAPEFSVSDLQSKLNRLGY RLTADGRYGPKTEEAVRDFQSKNDLKTDGIAGPVTLAALEARLLPALAERSAA >Mature_293_residues MRAVQVIGKVAPHAKPEYVAAFAQGDAALLAAQVNTPLRLAHLLAQVLHETGGLTIVRESGSYTAPRIEQIFGIGHHSAA VTPIEARQLAGNGVALFERVYGLGNPSMARQLGNTQPGDGWAYRGNGLLQTTGRGQHREMGRLSGVGDLFEEDPTQVIHP EHALKPALAEWTRGACNLLADQGNVRQLTRTINGGYNGYAERVAWLNRIWAVLGTGAPWEAAAPEFSVSDLQSKLNRLGY RLTADGRYGPKTEEAVRDFQSKNDLKTDGIAGPVTLAALEARLLPALAERSAA
Specific function: Unknown
COG id: COG3179
COG function: function code R; Predicted chitinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage D29 and phage L5 gp10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000726 [H]
Pfam domain/function: PF00182 Glyco_hydro_19 [H]
EC number: NA
Molecular weight: Translated: 31396; Mature: 31396
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVQVIGKVAPHAKPEYVAAFAQGDAALLAAQVNTPLRLAHLLAQVLHETGGLTIVRES CCHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECC GSYTAPRIEQIFGIGHHSAAVTPIEARQLAGNGVALFERVYGLGNPSMARQLGNTQPGDG CCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCC WAYRGNGLLQTTGRGQHREMGRLSGVGDLFEEDPTQVIHPEHALKPALAEWTRGACNLLA EEEECCCEEEECCCCCHHHHHHHCCCHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHH DQGNVRQLTRTINGGYNGYAERVAWLNRIWAVLGTGAPWEAAAPEFSVSDLQSKLNRLGY CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCE RLTADGRYGPKTEEAVRDFQSKNDLKTDGIAGPVTLAALEARLLPALAERSAA EEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRAVQVIGKVAPHAKPEYVAAFAQGDAALLAAQVNTPLRLAHLLAQVLHETGGLTIVRES CCHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECC GSYTAPRIEQIFGIGHHSAAVTPIEARQLAGNGVALFERVYGLGNPSMARQLGNTQPGDG CCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCC WAYRGNGLLQTTGRGQHREMGRLSGVGDLFEEDPTQVIHPEHALKPALAEWTRGACNLLA EEEECCCEEEECCCCCHHHHHHHCCCHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHH DQGNVRQLTRTINGGYNGYAERVAWLNRIWAVLGTGAPWEAAAPEFSVSDLQSKLNRLGY CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCE RLTADGRYGPKTEEAVRDFQSKNDLKTDGIAGPVTLAALEARLLPALAERSAA EEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]