| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is gsiD [H]
Identifier: 158424617
GI number: 158424617
Start: 3421752
End: 3422645
Strand: Reverse
Name: gsiD [H]
Synonym: AZC_2993
Alternate gene names: 158424617
Gene position: 3422645-3421752 (Counterclockwise)
Preceding gene: 158424618
Following gene: 158424616
Centisome position: 63.74
GC content: 67.67
Gene sequence:
>894_bases ATGAGCGCCGCGACCTCCGCCTCCGCTTCTCCCGCCGCGCCGCGCGCCATGCGCACGCCGGTCAGCGAGTTCTGGCGCCG CTTCCGCAAGCAGAAGGTGGCGCTCGTCGCCGGCGCCTTCCTGCTGGCGCTCCTTCTGGTCGCGATCTTCGCGCCGTGGG TTGCGCCCTATGATCCCTCGACGCCCGATTACATGGCCATCCTCCAGGGCCCGAGCGCGGCCCACTGGGCGGGCACCGAT GCCTATGGGCGCGATGTCTTCTCGCGCATCATCTTCGGGGCCCGCATCTCGCTGGCGGTGGGCTTCCTCTCCGTGTCGCT GGGGGGCTTCGTGGGCGTCACGCTTGGTGTCGTCTCGGGCTATTACGGCGGCCTCATCGACAGCGTCATCATGCGTGTAT GCGATGTGCTGCTGGCCTTCCCCGGCATCCTGCTGGCCATCGGCGTCATCGCCATCCTCGGGCCGGGCATCGACAACGTC ATCTACGCGGTGGCGGTATTCTCCGTGCCGATCTTCGCCCGCCTCGCGCGCGGCTCCACCCTCTCGCTGAAGCGGGCGGT CTATGTGGATGCGGCCCGCGCCATCGGCGTGAAGGACCGCGTCATCATGATGCGCCATCTGCTGCCGGGCGCGCTGCCGA ACGTCATCGTCTATTTCTCCATGCGCATCGGCACCTCCATTCTCACCGCCGCGAGCCTGAGCTTCATCGGCCTTGGCGCG CAGCCGCCGAGCCCGGAATGGGGCGCCATGTTGGCCGACGGGCGCAGCTACATTGGCGTCGCGGACAACGTGACGCTGTT CCCCGGCATCGCCATCTTCATCACCGTGCTCGCCTTCAACCTGCTTGGCGATGGCCTGCGCGATGCGCTCGATCCCAAGC TGAAGATGGCCTGA
Upstream 100 bases:
>100_bases TGATCCAGGCGGAGATTTTGCTGTTCTCGCTGGAGTTCATCTTCATCAACCTCGCGGTGGACGTGCTCTACGCCTTCGCC AATCCGGAGATCCGCTACAA
Downstream 100 bases:
>100_bases GGTGAAGCGCGCCCGCGATTTCGGCCTCGTCTGCGGCAGCCTGCCGCCGGGACCGCTCAACGCCATCACCGATGTGCCCG GCGTGCGCGTCGGCCACCGG
Product: peptide ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSAATSASASPAAPRAMRTPVSEFWRRFRKQKVALVAGAFLLALLLVAIFAPWVAPYDPSTPDYMAILQGPSAAHWAGTD AYGRDVFSRIIFGARISLAVGFLSVSLGGFVGVTLGVVSGYYGGLIDSVIMRVCDVLLAFPGILLAIGVIAILGPGIDNV IYAVAVFSVPIFARLARGSTLSLKRAVYVDAARAIGVKDRVIMMRHLLPGALPNVIVYFSMRIGTSILTAASLSFIGLGA QPPSPEWGAMLADGRSYIGVADNVTLFPGIAIFITVLAFNLLGDGLRDALDPKLKMA
Sequences:
>Translated_297_residues MSAATSASASPAAPRAMRTPVSEFWRRFRKQKVALVAGAFLLALLLVAIFAPWVAPYDPSTPDYMAILQGPSAAHWAGTD AYGRDVFSRIIFGARISLAVGFLSVSLGGFVGVTLGVVSGYYGGLIDSVIMRVCDVLLAFPGILLAIGVIAILGPGIDNV IYAVAVFSVPIFARLARGSTLSLKRAVYVDAARAIGVKDRVIMMRHLLPGALPNVIVYFSMRIGTSILTAASLSFIGLGA QPPSPEWGAMLADGRSYIGVADNVTLFPGIAIFITVLAFNLLGDGLRDALDPKLKMA >Mature_296_residues SAATSASASPAAPRAMRTPVSEFWRRFRKQKVALVAGAFLLALLLVAIFAPWVAPYDPSTPDYMAILQGPSAAHWAGTDA YGRDVFSRIIFGARISLAVGFLSVSLGGFVGVTLGVVSGYYGGLIDSVIMRVCDVLLAFPGILLAIGVIAILGPGIDNVI YAVAVFSVPIFARLARGSTLSLKRAVYVDAARAIGVKDRVIMMRHLLPGALPNVIVYFSMRIGTSILTAASLSFIGLGAQ PPSPEWGAMLADGRSYIGVADNVTLFPGIAIFITVLAFNLLGDGLRDALDPKLKMA
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1173
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787054, Length=283, Percent_Identity=58.6572438162544, Blast_Score=353, Evalue=1e-98, Organism=Escherichia coli, GI1787760, Length=266, Percent_Identity=43.609022556391, Blast_Score=235, Evalue=3e-63, Organism=Escherichia coli, GI1789964, Length=290, Percent_Identity=46.8965517241379, Blast_Score=216, Evalue=1e-57, Organism=Escherichia coli, GI1789889, Length=244, Percent_Identity=38.9344262295082, Blast_Score=181, Evalue=8e-47, Organism=Escherichia coli, GI1787498, Length=270, Percent_Identity=38.5185185185185, Blast_Score=167, Evalue=7e-43, Organism=Escherichia coli, GI1787549, Length=283, Percent_Identity=34.982332155477, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI1788505, Length=224, Percent_Identity=33.0357142857143, Blast_Score=125, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31259; Mature: 31128
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAATSASASPAAPRAMRTPVSEFWRRFRKQKVALVAGAFLLALLLVAIFAPWVAPYDPS CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TPDYMAILQGPSAAHWAGTDAYGRDVFSRIIFGARISLAVGFLSVSLGGFVGVTLGVVSG CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYGGLIDSVIMRVCDVLLAFPGILLAIGVIAILGPGIDNVIYAVAVFSVPIFARLARGST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC LSLKRAVYVDAARAIGVKDRVIMMRHLLPGALPNVIVYFSMRIGTSILTAASLSFIGLGA HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QPPSPEWGAMLADGRSYIGVADNVTLFPGIAIFITVLAFNLLGDGLRDALDPKLKMA CCCCCCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SAATSASASPAAPRAMRTPVSEFWRRFRKQKVALVAGAFLLALLLVAIFAPWVAPYDPS CCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TPDYMAILQGPSAAHWAGTDAYGRDVFSRIIFGARISLAVGFLSVSLGGFVGVTLGVVSG CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYGGLIDSVIMRVCDVLLAFPGILLAIGVIAILGPGIDNVIYAVAVFSVPIFARLARGST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC LSLKRAVYVDAARAIGVKDRVIMMRHLLPGALPNVIVYFSMRIGTSILTAASLSFIGLGA HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QPPSPEWGAMLADGRSYIGVADNVTLFPGIAIFITVLAFNLLGDGLRDALDPKLKMA CCCCCCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]