| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424616
Identifier: 158424616
GI number: 158424616
Start: 3420704
End: 3421750
Strand: Reverse
Name: 158424616
Synonym: AZC_2992
Alternate gene names: NA
Gene position: 3421750-3420704 (Counterclockwise)
Preceding gene: 158424617
Following gene: 158424615
Centisome position: 63.72
GC content: 70.39
Gene sequence:
>1047_bases GTGAAGCGCGCCCGCGATTTCGGCCTCGTCTGCGGCAGCCTGCCGCCGGGACCGCTCAACGCCATCACCGATGTGCCCGG CGTGCGCGTCGGCCACCGGACCCTGGTGGATGGCGACGTGCGCACCGGCTTTACCGCGCTGGTGCCGCATGAAGGCGACC TGTTCCGCGAGAAGCTGCCGGCGGCGGTCGAGGTGATCAACGGCTTCGGCAAGAGCTGCGGGCTGATCCAGGTGGAGGAG CTGGGCCAGCTCGAGACGCCCATCCTTCTGGGCAATACGCTCTCCGTCGGCACCGGCTTCGAAGCGCTGGTGCGCCGGGC GCTGGCCGCCAATCCCGACATCGGGCGCGAGACCGGCACCGTGAACCCGGTGGTGATGGAGTGCAACGACGGCTGGCTCT CCGACATCCGGGCGCTGGCCCTGACCGTGGACGACGCCCATGCCGCGCTCGATGCTGCCGTGTCCGGAATGGTGCCGGAA GGGGCGGTGGGGGCAGGGGCCGGCATGAGCGCTTTCGGCTTCAAGGGCGGCATCGCCACCGCATCCCGCCTGCTGACGCT CGATGGGCGGGATTACACGCTTGGCGTGCTGGTGCTCGCCAATTTCGGGCGCGCCGGCGATCTCGTGCTGCCCGACGGCC GGAGGCCGGAGGTGCCGAAGCTGCGCAAGTCCGACTTCGCGTCCGTGGATGCACCCGAACGTGGGTCGGTCATCATCGTG CTCGCCACCGACATTCCGCTGGAGAGCCGGCAGTTGAAGCGCATCGCGCGGCGGTGCGGGGCAGGGTTGGCGAAGCTCGG CGCCTTCTGGGGCAATGGCTCGGGCGATATCGCGCTCGCCTTCTCCACCGCCGCCCGCATCGCTCACCATGAGACGGCCG ATCTTCTGCCGCGCATGGTGCTGAACGAAAACCGCATCGACCTGCCGTTCCGCGCGGCGGCCGATGCCACGCAGGAGGCG GTGCTGAATGCGCTTCTCGCCGCCCCGAGAACGCGCGGCCGCGACGGCCACATGCGCCCCTCCCTCGCCGACGTGCTGGG CGGCTGA
Upstream 100 bases:
>100_bases CTGTTCCCCGGCATCGCCATCTTCATCACCGTGCTCGCCTTCAACCTGCTTGGCGATGGCCTGCGCGATGCGCTCGATCC CAAGCTGAAGATGGCCTGAG
Downstream 100 bases:
>100_bases GCGACAGGACACGAAGGTTCAAGGACATGAAGGTTTACATCTCCGCCGACATCGAGGGTGTGGCGGGCGTGGTCTCTCCC CAGCAGGGGCAGCCGGGCAA
Product: D-aminopeptidase
Products: NA
Alternate protein names: D-Aminopeptidase; Aminopeptidase DmpA; L-Aminopeptidase/D-Esterase; Aminopeptidase; Peptidase S; T4 Family Peptidase; Peptidase T4 Family; Family; S58 Family Peptidase; L-Aminopeptidase DmpA; D-Amino Peptidase Dmpa Family; Serine Peptidase; L-Aminopeptidase Dmpa; Aminopeptidase DpmA; D-Alanine-D-Alanine Ligase / Aminopeptidase; Peptidase Family; Aminopeptidase-Like Protein; D-Aminopeptidease; D-AMINO PEPTIDASE DmpA Family; L-Aminopeptidase D-Ala-Esterase/Amidase
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKRARDFGLVCGSLPPGPLNAITDVPGVRVGHRTLVDGDVRTGFTALVPHEGDLFREKLPAAVEVINGFGKSCGLIQVEE LGQLETPILLGNTLSVGTGFEALVRRALAANPDIGRETGTVNPVVMECNDGWLSDIRALALTVDDAHAALDAAVSGMVPE GAVGAGAGMSAFGFKGGIATASRLLTLDGRDYTLGVLVLANFGRAGDLVLPDGRRPEVPKLRKSDFASVDAPERGSVIIV LATDIPLESRQLKRIARRCGAGLAKLGAFWGNGSGDIALAFSTAARIAHHETADLLPRMVLNENRIDLPFRAAADATQEA VLNALLAAPRTRGRDGHMRPSLADVLGG
Sequences:
>Translated_348_residues MKRARDFGLVCGSLPPGPLNAITDVPGVRVGHRTLVDGDVRTGFTALVPHEGDLFREKLPAAVEVINGFGKSCGLIQVEE LGQLETPILLGNTLSVGTGFEALVRRALAANPDIGRETGTVNPVVMECNDGWLSDIRALALTVDDAHAALDAAVSGMVPE GAVGAGAGMSAFGFKGGIATASRLLTLDGRDYTLGVLVLANFGRAGDLVLPDGRRPEVPKLRKSDFASVDAPERGSVIIV LATDIPLESRQLKRIARRCGAGLAKLGAFWGNGSGDIALAFSTAARIAHHETADLLPRMVLNENRIDLPFRAAADATQEA VLNALLAAPRTRGRDGHMRPSLADVLGG >Mature_348_residues MKRARDFGLVCGSLPPGPLNAITDVPGVRVGHRTLVDGDVRTGFTALVPHEGDLFREKLPAAVEVINGFGKSCGLIQVEE LGQLETPILLGNTLSVGTGFEALVRRALAANPDIGRETGTVNPVVMECNDGWLSDIRALALTVDDAHAALDAAVSGMVPE GAVGAGAGMSAFGFKGGIATASRLLTLDGRDYTLGVLVLANFGRAGDLVLPDGRRPEVPKLRKSDFASVDAPERGSVIIV LATDIPLESRQLKRIARRCGAGLAKLGAFWGNGSGDIALAFSTAARIAHHETADLLPRMVLNENRIDLPFRAAADATQEA VLNALLAAPRTRGRDGHMRPSLADVLGG
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36368; Mature: 36368
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRARDFGLVCGSLPPGPLNAITDVPGVRVGHRTLVDGDVRTGFTALVPHEGDLFREKLP CCCCCCCCEEECCCCCCCCHHHCCCCCCEECCEEEECCCCCCCEEEECCCCCHHHHHHHH AAVEVINGFGKSCGLIQVEELGQLETPILLGNTLSVGTGFEALVRRALAANPDIGRETGT HHHHHHHHCCCCCCEEEHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCC VNPVVMECNDGWLSDIRALALTVDDAHAALDAAVSGMVPEGAVGAGAGMSAFGFKGGIAT CCCEEEECCCCHHHHHEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCHHH ASRLLTLDGRDYTLGVLVLANFGRAGDLVLPDGRRPEVPKLRKSDFASVDAPERGSVIIV HEEEEEECCCCEEEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE LATDIPLESRQLKRIARRCGAGLAKLGAFWGNGSGDIALAFSTAARIAHHETADLLPRMV EECCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH LNENRIDLPFRAAADATQEAVLNALLAAPRTRGRDGHMRPSLADVLGG HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MKRARDFGLVCGSLPPGPLNAITDVPGVRVGHRTLVDGDVRTGFTALVPHEGDLFREKLP CCCCCCCCEEECCCCCCCCHHHCCCCCCEECCEEEECCCCCCCEEEECCCCCHHHHHHHH AAVEVINGFGKSCGLIQVEELGQLETPILLGNTLSVGTGFEALVRRALAANPDIGRETGT HHHHHHHHCCCCCCEEEHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCC VNPVVMECNDGWLSDIRALALTVDDAHAALDAAVSGMVPEGAVGAGAGMSAFGFKGGIAT CCCEEEECCCCHHHHHEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCHHH ASRLLTLDGRDYTLGVLVLANFGRAGDLVLPDGRRPEVPKLRKSDFASVDAPERGSVIIV HEEEEEECCCCEEEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE LATDIPLESRQLKRIARRCGAGLAKLGAFWGNGSGDIALAFSTAARIAHHETADLLPRMV EECCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH LNENRIDLPFRAAADATQEAVLNALLAAPRTRGRDGHMRPSLADVLGG HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA