| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is tas [H]
Identifier: 158424613
GI number: 158424613
Start: 3417824
End: 3418879
Strand: Direct
Name: tas [H]
Synonym: AZC_2989
Alternate gene names: 158424613
Gene position: 3417824-3418879 (Clockwise)
Preceding gene: 158424612
Following gene: 158424622
Centisome position: 63.65
GC content: 65.15
Gene sequence:
>1056_bases ATGCTTGAGTATCGCAGGCTCGGACGCACCGACCTCAAGGTGTCGTCCATCATGCTCGGCACCATGACCTGGGGCCAGCA GAACACGGAAGCCGAAGGCCACGCCCAGCTCGACCTCGCGCTCGATGCCGGCATCAACTTCATCGACACCGCCGAACTCT ATTCCATCCCGCCCATGGCGGAGACGCAGGGCTCCACCGAGCGGATCATTGGTCAGTGGTTCAAGAGCCGCAAAAATCGC GACAAGGTGATTCTCGCCTCGAAGGTGGTGGGCCGCTCCGACAGCACCTATTTCCGCGCCTCCGGCGAAGGCACGAAGCT CGACCGGGCGAATATCACCGAGGCGGTCGAGAACTCCCTGAAGCGCCTCCAGACGGACTATATCGACCTCTACCAGCTCC ACTGGCCGGACCGCGCCGTGCCGCTCTTCGGCAATTCGGCCGGCACCCGCGCGCGGGGCGGCGGGGACGGCACGGAAGTG CCGGTCGCCGAGACGCTGGGCGTGCTGGAGGATCTGGTGAAGGCCGGCAAGATCCGCCACATCGGCCTCTCCAACGAGAC CGCATGGGGCGCGCATAAATTCCTGCTGGAAGCCGAGCGCGGGCATGGTCCGCGTATCGTCTCGGTCCAGAACGCCTACA ACCTCATCAACCGCACCTATGAGGTGGGGCTGGCGGAATTTGCCGAGCGGGATGATGTGGGCCTGCTCGCTTACTCCCCC CTCGCGCAGGGTTTCCTCACTGGCAAGTATCGCCAGGGCGCCCGGCCCGAGGGCGCGCGCATGACGCTGTTCAATCGCGG CCAGCGCTACGAAAAGCCCGGCACGGCGGAAGCCATCGAGGATTATGCGGCGCTGGCGAAGGAACTCGGCCTGTCGCTCG TTCAGCTCTCGCTCGCCTGGGTGACGTCGCGGCCCTTCGTGACCGCCAACATCATCGGCGCGACCAGCATCGCCCAGTTG AAGGAAAACCTCGCCACCGTGGATGTCGCCATCACGCAGGAGATCGAAGAGAAGGTGAACGCCATCTTCCAGCTGCGCGG CAGCCCGGCGCCCTGA
Upstream 100 bases:
>100_bases CAACTGCCGTTGCGTCCGCTTGCCAAGGGCCAAGGCGAAGCTGCTACAAAGCGCTATCCGCCGGCCGCGCCGGCGCCCCG CCCACGGAGTTTTCCGCCAC
Downstream 100 bases:
>100_bases TCCACGAACGGCGCGCGGGCTGCCCGCGCGCCGGACCTCTCAGAAAATCGCGGTGTGCATGGAGCCGTCGGCCTGCATCC AGGCGCGGTACATGCCCTCG
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MLEYRRLGRTDLKVSSIMLGTMTWGQQNTEAEGHAQLDLALDAGINFIDTAELYSIPPMAETQGSTERIIGQWFKSRKNR DKVILASKVVGRSDSTYFRASGEGTKLDRANITEAVENSLKRLQTDYIDLYQLHWPDRAVPLFGNSAGTRARGGGDGTEV PVAETLGVLEDLVKAGKIRHIGLSNETAWGAHKFLLEAERGHGPRIVSVQNAYNLINRTYEVGLAEFAERDDVGLLAYSP LAQGFLTGKYRQGARPEGARMTLFNRGQRYEKPGTAEAIEDYAALAKELGLSLVQLSLAWVTSRPFVTANIIGATSIAQL KENLATVDVAITQEIEEKVNAIFQLRGSPAP
Sequences:
>Translated_351_residues MLEYRRLGRTDLKVSSIMLGTMTWGQQNTEAEGHAQLDLALDAGINFIDTAELYSIPPMAETQGSTERIIGQWFKSRKNR DKVILASKVVGRSDSTYFRASGEGTKLDRANITEAVENSLKRLQTDYIDLYQLHWPDRAVPLFGNSAGTRARGGGDGTEV PVAETLGVLEDLVKAGKIRHIGLSNETAWGAHKFLLEAERGHGPRIVSVQNAYNLINRTYEVGLAEFAERDDVGLLAYSP LAQGFLTGKYRQGARPEGARMTLFNRGQRYEKPGTAEAIEDYAALAKELGLSLVQLSLAWVTSRPFVTANIIGATSIAQL KENLATVDVAITQEIEEKVNAIFQLRGSPAP >Mature_351_residues MLEYRRLGRTDLKVSSIMLGTMTWGQQNTEAEGHAQLDLALDAGINFIDTAELYSIPPMAETQGSTERIIGQWFKSRKNR DKVILASKVVGRSDSTYFRASGEGTKLDRANITEAVENSLKRLQTDYIDLYQLHWPDRAVPLFGNSAGTRARGGGDGTEV PVAETLGVLEDLVKAGKIRHIGLSNETAWGAHKFLLEAERGHGPRIVSVQNAYNLINRTYEVGLAEFAERDDVGLLAYSP LAQGFLTGKYRQGARPEGARMTLFNRGQRYEKPGTAEAIEDYAALAKELGLSLVQLSLAWVTSRPFVTANIIGATSIAQL KENLATVDVAITQEIEEKVNAIFQLRGSPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=360, Percent_Identity=27.2222222222222, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI27436962, Length=360, Percent_Identity=27.2222222222222, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI27436966, Length=360, Percent_Identity=26.9444444444444, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI4504825, Length=351, Percent_Identity=26.7806267806268, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI27436969, Length=351, Percent_Identity=26.7806267806268, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI27436971, Length=359, Percent_Identity=26.1838440111421, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI41327764, Length=339, Percent_Identity=27.7286135693215, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI41152114, Length=330, Percent_Identity=26.0606060606061, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI223718702, Length=329, Percent_Identity=25.531914893617, Blast_Score=73, Evalue=4e-13, Organism=Escherichia coli, GI1789199, Length=354, Percent_Identity=45.4802259887006, Blast_Score=316, Evalue=2e-87, Organism=Escherichia coli, GI87081735, Length=348, Percent_Identity=33.3333333333333, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1788070, Length=337, Percent_Identity=29.9703264094956, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1789375, Length=337, Percent_Identity=27.5964391691395, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1788081, Length=325, Percent_Identity=28.3076923076923, Blast_Score=84, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17564128, Length=326, Percent_Identity=25.1533742331288, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6325169, Length=354, Percent_Identity=28.8135593220339, Blast_Score=118, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6319958, Length=326, Percent_Identity=26.6871165644172, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6323998, Length=356, Percent_Identity=26.9662921348315, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6319951, Length=338, Percent_Identity=24.5562130177515, Blast_Score=83, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6322615, Length=272, Percent_Identity=24.2647058823529, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321052, Length=137, Percent_Identity=32.8467153284672, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI24646159, Length=261, Percent_Identity=31.8007662835249, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI24646155, Length=341, Percent_Identity=27.5659824046921, Blast_Score=75, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38495; Mature: 38495
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEYRRLGRTDLKVSSIMLGTMTWGQQNTEAEGHAQLDLALDAGINFIDTAELYSIPPMA CCCCHHCCCCCCEEHHEEEEEEECCCCCCCCCCCEEEEEEECCCCCEEECHHHHCCCCCC ETQGSTERIIGQWFKSRKNRDKVILASKVVGRSDSTYFRASGEGTKLDRANITEAVENSL CCCCCHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHH KRLQTDYIDLYQLHWPDRAVPLFGNSAGTRARGGGDGTEVPVAETLGVLEDLVKAGKIRH HHHHHHHHHEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE IGLSNETAWGAHKFLLEAERGHGPRIVSVQNAYNLINRTYEVGLAEFAERDDVGLLAYSP ECCCCCCCCCHHHHEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECH LAQGFLTGKYRQGARPEGARMTLFNRGQRYEKPGTAEAIEDYAALAKELGLSLVQLSLAW HHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH VTSRPFVTANIIGATSIAQLKENLATVDVAITQEIEEKVNAIFQLRGSPAP HCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC >Mature Secondary Structure MLEYRRLGRTDLKVSSIMLGTMTWGQQNTEAEGHAQLDLALDAGINFIDTAELYSIPPMA CCCCHHCCCCCCEEHHEEEEEEECCCCCCCCCCCEEEEEEECCCCCEEECHHHHCCCCCC ETQGSTERIIGQWFKSRKNRDKVILASKVVGRSDSTYFRASGEGTKLDRANITEAVENSL CCCCCHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHH KRLQTDYIDLYQLHWPDRAVPLFGNSAGTRARGGGDGTEVPVAETLGVLEDLVKAGKIRH HHHHHHHHHEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE IGLSNETAWGAHKFLLEAERGHGPRIVSVQNAYNLINRTYEVGLAEFAERDDVGLLAYSP ECCCCCCCCCHHHHEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECH LAQGFLTGKYRQGARPEGARMTLFNRGQRYEKPGTAEAIEDYAALAKELGLSLVQLSLAW HHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH VTSRPFVTANIIGATSIAQLKENLATVDVAITQEIEEKVNAIFQLRGSPAP HCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]