Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is matE

Identifier: 158424587

GI number: 158424587

Start: 3384891

End: 3386270

Strand: Direct

Name: matE

Synonym: AZC_2963

Alternate gene names: NA

Gene position: 3384891-3386270 (Clockwise)

Preceding gene: 158424586

Following gene: 158424588

Centisome position: 63.04

GC content: 70.0

Gene sequence:

>1380_bases
ATGCGCCATGTGGCGGTCATGACGGGCACCGGCTCGGTGGGGCTGGTCGCCGTGTTCATGGTGGACCTGCTCAACCTCTT
CTACATCTCGCTGCTGGGCGAGGCGGAACTGGCGGCGGCCATCGGCTATGCGGGCACGGTGATGTTCTTCGTCACCTCCG
TCACCATCGGCCTCATGATCGCGGCCTCCGCCACCGTCTCGCGGGCGCTCGGCGCCGGGCGGCGGCGGGAGGCACGCCAG
CGCGCCACCACGGCGGCGGTGCTGATGCTCGCCACCTGCCTCATCCTGACGGCGGTGACGCTGCCGCTGCTGCATCCCCT
CCTCCGCCTCCTCGGCGCCACCGGACACACCGCGGCCATTGCGGAGCGCTTCCTGTTCATGGTCACGCTCTCGACGCCGC
TGCTCGGCCTCGGCATGGTCGCCTCCGGCGTCCTGCGGGCGACGGGCGATGCCAGCCGCTCCATGTGGGTGACGCTCGGC
GGCGGCATCGTCACCGCATTGCTGGACCCGCTGCTGATCCTCGTGCTCCATCTGGGGGTGGATGGCGCGGCCTATGCGAG
CTCGGCCTCCCGCCTCTTCATGGCCATCGCCGGCCTCTACTGGTGCGGCAAGCACCATCGCCTGCTGACGCGGCCGACCC
GGCGGATGATCGCCGAGAACTTCCGTCCCATCGCGTCCATCGCCTGGCCGGCCATCCTCACCAATGTGGCCACCCCGGTG
GGCAATGCCTATGTCACTTCCGCCCTCGCCCCCTTCGGCGACGAGGCGGTGGCGGCCTGGGCGGTGATCGGGCGCGTCAT
CCCCGTGGCGTTCGGGCCGCTGTTCGCGCTGACTGGGGCTGTCGGCCCCATCTTCGGCCAGAATCTCGGTGCCGGCCGCT
ACGACCGGCTGCGCACCACCTTGCGTGACAGCCTGCTGCTGATCCTCTGCTACGTCCTGCTCGTCTGGCTGGCCATGGCG
CTCGGCCGCGGTTCCATCGCCTCCGGTTTCGGGCTGACAGATGCGGGACGCGGCATCGTGGAGTTCTTCTGCCTCGTCTC
GGCGGGCAGCTTCATGTTCCTCGGTGCCCTGTTCGTCTCCAACGCCGCCTTCAACAATCTCGGCGCGCCCCTGTTTTCCA
CGCTGTTCAACTGGGGCCGGGCGACACTCGGCACGGTGCCCTTCGCCTGGGCGGGGGGACAGCTCATGGGGCCGAACGGG
GTCATCCTCGGACAGAGCCTCGGCGCCGTGGCCTTCGGGCTCGCGGGCATGGTGTTCGCGTTCCGGCTCATCGAGAAGAT
CGGTCGTTCAGGTGCGCCGGCTGCGCCCGGCCGCCACCCGGCGCCAGCGGAAATGCCGCCTTTGTCCTCGCCGCAGGATG
CGGCGGCCATCGACCCGTGA

Upstream 100 bases:

>100_bases
GGATCGGGCGCGTTCAGCCTGATCGCATCCGGAACTCGCCCCCGCCCGCTCCAAGGTTCCCATGGCCCGTTCCCATCCCA
CCTTCACCCACGGTTCCATC

Downstream 100 bases:

>100_bases
TTTTGGCGCTGTGATGGCGTAGGGTCTCCTTCAGGGGAGGCCATACATGGATCAGTTCACCCAGTTGCTGAAGTCCGCCC
AAGGCGGGCACGGCGTCGAG

Product: multi anti extrusion protein

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MRHVAVMTGTGSVGLVAVFMVDLLNLFYISLLGEAELAAAIGYAGTVMFFVTSVTIGLMIAASATVSRALGAGRRREARQ
RATTAAVLMLATCLILTAVTLPLLHPLLRLLGATGHTAAIAERFLFMVTLSTPLLGLGMVASGVLRATGDASRSMWVTLG
GGIVTALLDPLLILVLHLGVDGAAYASSASRLFMAIAGLYWCGKHHRLLTRPTRRMIAENFRPIASIAWPAILTNVATPV
GNAYVTSALAPFGDEAVAAWAVIGRVIPVAFGPLFALTGAVGPIFGQNLGAGRYDRLRTTLRDSLLLILCYVLLVWLAMA
LGRGSIASGFGLTDAGRGIVEFFCLVSAGSFMFLGALFVSNAAFNNLGAPLFSTLFNWGRATLGTVPFAWAGGQLMGPNG
VILGQSLGAVAFGLAGMVFAFRLIEKIGRSGAPAAPGRHPAPAEMPPLSSPQDAAAIDP

Sequences:

>Translated_459_residues
MRHVAVMTGTGSVGLVAVFMVDLLNLFYISLLGEAELAAAIGYAGTVMFFVTSVTIGLMIAASATVSRALGAGRRREARQ
RATTAAVLMLATCLILTAVTLPLLHPLLRLLGATGHTAAIAERFLFMVTLSTPLLGLGMVASGVLRATGDASRSMWVTLG
GGIVTALLDPLLILVLHLGVDGAAYASSASRLFMAIAGLYWCGKHHRLLTRPTRRMIAENFRPIASIAWPAILTNVATPV
GNAYVTSALAPFGDEAVAAWAVIGRVIPVAFGPLFALTGAVGPIFGQNLGAGRYDRLRTTLRDSLLLILCYVLLVWLAMA
LGRGSIASGFGLTDAGRGIVEFFCLVSAGSFMFLGALFVSNAAFNNLGAPLFSTLFNWGRATLGTVPFAWAGGQLMGPNG
VILGQSLGAVAFGLAGMVFAFRLIEKIGRSGAPAAPGRHPAPAEMPPLSSPQDAAAIDP
>Mature_459_residues
MRHVAVMTGTGSVGLVAVFMVDLLNLFYISLLGEAELAAAIGYAGTVMFFVTSVTIGLMIAASATVSRALGAGRRREARQ
RATTAAVLMLATCLILTAVTLPLLHPLLRLLGATGHTAAIAERFLFMVTLSTPLLGLGMVASGVLRATGDASRSMWVTLG
GGIVTALLDPLLILVLHLGVDGAAYASSASRLFMAIAGLYWCGKHHRLLTRPTRRMIAENFRPIASIAWPAILTNVATPV
GNAYVTSALAPFGDEAVAAWAVIGRVIPVAFGPLFALTGAVGPIFGQNLGAGRYDRLRTTLRDSLLLILCYVLLVWLAMA
LGRGSIASGFGLTDAGRGIVEFFCLVSAGSFMFLGALFVSNAAFNNLGAPLFSTLFNWGRATLGTVPFAWAGGQLMGPNG
VILGQSLGAVAFGLAGMVFAFRLIEKIGRSGAPAAPGRHPAPAEMPPLSSPQDAAAIDP

Specific function: May be a membrane-bound protein, possibly involved in IAA or IAA-Lysine transport [H]

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR015522 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 47678; Mature: 47678

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHVAVMTGTGSVGLVAVFMVDLLNLFYISLLGEAELAAAIGYAGTVMFFVTSVTIGLMI
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASATVSRALGAGRRREARQRATTAAVLMLATCLILTAVTLPLLHPLLRLLGATGHTAAI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AERFLFMVTLSTPLLGLGMVASGVLRATGDASRSMWVTLGGGIVTALLDPLLILVLHLGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCC
DGAAYASSASRLFMAIAGLYWCGKHHRLLTRPTRRMIAENFRPIASIAWPAILTNVATPV
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
GNAYVTSALAPFGDEAVAAWAVIGRVIPVAFGPLFALTGAVGPIFGQNLGAGRYDRLRTT
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LRDSLLLILCYVLLVWLAMALGRGSIASGFGLTDAGRGIVEFFCLVSAGSFMFLGALFVS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
NAAFNNLGAPLFSTLFNWGRATLGTVPFAWAGGQLMGPNGVILGQSLGAVAFGLAGMVFA
HHHHHHCCHHHHHHHHHHCCHHHCCCCCEECCCEEECCCCEEECCHHHHHHHHHHHHHHH
FRLIEKIGRSGAPAAPGRHPAPAEMPPLSSPQDAAAIDP
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRHVAVMTGTGSVGLVAVFMVDLLNLFYISLLGEAELAAAIGYAGTVMFFVTSVTIGLMI
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASATVSRALGAGRRREARQRATTAAVLMLATCLILTAVTLPLLHPLLRLLGATGHTAAI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AERFLFMVTLSTPLLGLGMVASGVLRATGDASRSMWVTLGGGIVTALLDPLLILVLHLGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCC
DGAAYASSASRLFMAIAGLYWCGKHHRLLTRPTRRMIAENFRPIASIAWPAILTNVATPV
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
GNAYVTSALAPFGDEAVAAWAVIGRVIPVAFGPLFALTGAVGPIFGQNLGAGRYDRLRTT
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LRDSLLLILCYVLLVWLAMALGRGSIASGFGLTDAGRGIVEFFCLVSAGSFMFLGALFVS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
NAAFNNLGAPLFSTLFNWGRATLGTVPFAWAGGQLMGPNGVILGQSLGAVAFGLAGMVFA
HHHHHHCCHHHHHHHHHHCCHHHCCCCCEECCCEEECCCCEEECCHHHHHHHHHHHHHHH
FRLIEKIGRSGAPAAPGRHPAPAEMPPLSSPQDAAAIDP
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2377619 [H]