| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158424585
Identifier: 158424585
GI number: 158424585
Start: 3381799
End: 3382641
Strand: Direct
Name: 158424585
Synonym: AZC_2961
Alternate gene names: NA
Gene position: 3381799-3382641 (Clockwise)
Preceding gene: 158424575
Following gene: 158424586
Centisome position: 62.98
GC content: 65.84
Gene sequence:
>843_bases TTGGCTTCTTTCTTGATTTACATCAAACACAAATTTGCGACGAGCCGCAATCAGCACACCCCTGCCCCACATGCGACACA AAGTCGGATTGGAAGGCGCCGCGGATGTGCATCGGCACCGGCGTTTAGAAAACGTCCACCCGATTCACGCTTCATGCCGC GGGGATGGAAACATCCTCAGGAGAAGGAGCCGGGCGTTCTCATTCTTGACATGGACGGCAGGCTCCTTAAGCACAGACGA GACATTTCAACGGCCGCAGGCATCCTGCTTGCTTGGCTGGAGCCCTGTTTGGTGATGCCCATGCTGCCCTTCCGCCTGAT TGCCTCGGCGCTGCCCCGGATGCGCGCCCTTGCGCCGGCGGCCGCCCTCATCGGCCTGCTCCTCGGCGTCAGCCAGGCGA CGCCCGCCGCCGCCCAGGGCGTGGTGAAGCAGACCTTCGGCGAGTGGCAGATCCGCTGCGACACGCCGCCCGGCGCCCAG AGCGAGCAGTGCGTCCTGCTCCAGAGCGTGCAGGCGGACGACCGGCCCAACGTCGGCCTCACCGTCATCATCCTGCGCAC CGCCGACCAGAAGAGCCGCCTGCTGCGCGTGCTTGCCCCCCTCGGCGTGCTGCTGCCTTCCGGCCTCGGCCTCAAGATCG ACGATGCGGACGTGGGCCGCGCCGGCTTCGTGCGCTGCCTGCCCAACGGCTGCGTCGCCGAGGTGGTGATGGACGACACG CTCATCGGCCGCCTGCGCGCCGGCAAGATGGCCACCTTCATCATCTTCCAGACCCCCGAGGAAGGCATCGGCATTCCGCT GAGCCTCAACGGCTTCGGCCCCGGCTTCGACGCCCTGAAATAA
Upstream 100 bases:
>100_bases CTCCGAGGGCGGCAGAGCCGCCGGACGTGTCTTCCCTGGCGCCCAAACGCCCGGGCACACAACCCGTGATTGCCGTGCAC TTTTACCGCACAGCGGCGCT
Downstream 100 bases:
>100_bases GCCGGGCCAGCGGCCCCCCCGCCATCCACACACTGCGGGCCGGATTTTCCGCCGCCGGCACGGTTTGGCCATGCTTGGGT TCCAAAAGGCACGCCCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Invasion Associated Locus B; Invasion Associated Locus B Protein; Invasion Protein B
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MASFLIYIKHKFATSRNQHTPAPHATQSRIGRRRGCASAPAFRKRPPDSRFMPRGWKHPQEKEPGVLILDMDGRLLKHRR DISTAAGILLAWLEPCLVMPMLPFRLIASALPRMRALAPAAALIGLLLGVSQATPAAAQGVVKQTFGEWQIRCDTPPGAQ SEQCVLLQSVQADDRPNVGLTVIILRTADQKSRLLRVLAPLGVLLPSGLGLKIDDADVGRAGFVRCLPNGCVAEVVMDDT LIGRLRAGKMATFIIFQTPEEGIGIPLSLNGFGPGFDALK
Sequences:
>Translated_280_residues MASFLIYIKHKFATSRNQHTPAPHATQSRIGRRRGCASAPAFRKRPPDSRFMPRGWKHPQEKEPGVLILDMDGRLLKHRR DISTAAGILLAWLEPCLVMPMLPFRLIASALPRMRALAPAAALIGLLLGVSQATPAAAQGVVKQTFGEWQIRCDTPPGAQ SEQCVLLQSVQADDRPNVGLTVIILRTADQKSRLLRVLAPLGVLLPSGLGLKIDDADVGRAGFVRCLPNGCVAEVVMDDT LIGRLRAGKMATFIIFQTPEEGIGIPLSLNGFGPGFDALK >Mature_279_residues ASFLIYIKHKFATSRNQHTPAPHATQSRIGRRRGCASAPAFRKRPPDSRFMPRGWKHPQEKEPGVLILDMDGRLLKHRRD ISTAAGILLAWLEPCLVMPMLPFRLIASALPRMRALAPAAALIGLLLGVSQATPAAAQGVVKQTFGEWQIRCDTPPGAQS EQCVLLQSVQADDRPNVGLTVIILRTADQKSRLLRVLAPLGVLLPSGLGLKIDDADVGRAGFVRCLPNGCVAEVVMDDTL IGRLRAGKMATFIIFQTPEEGIGIPLSLNGFGPGFDALK
Specific function: Unknown
COG id: COG5342
COG function: function code R; Invasion protein B, involved in pathogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30317; Mature: 30186
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFLIYIKHKFATSRNQHTPAPHATQSRIGRRRGCASAPAFRKRPPDSRFMPRGWKHPQ CCCEEEEEEEHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCC EKEPGVLILDMDGRLLKHRRDISTAAGILLAWLEPCLVMPMLPFRLIASALPRMRALAPA CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALIGLLLGVSQATPAAAQGVVKQTFGEWQIRCDTPPGAQSEQCVLLQSVQADDRPNVGL HHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHCCCCCCCCCE TVIILRTADQKSRLLRVLAPLGVLLPSGLGLKIDDADVGRAGFVRCLPNGCVAEVVMDDT EEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHEEECCCCHHHHHHHHHH LIGRLRAGKMATFIIFQTPEEGIGIPLSLNGFGPGFDALK HHHHHCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure ASFLIYIKHKFATSRNQHTPAPHATQSRIGRRRGCASAPAFRKRPPDSRFMPRGWKHPQ CCEEEEEEEHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCC EKEPGVLILDMDGRLLKHRRDISTAAGILLAWLEPCLVMPMLPFRLIASALPRMRALAPA CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALIGLLLGVSQATPAAAQGVVKQTFGEWQIRCDTPPGAQSEQCVLLQSVQADDRPNVGL HHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHCCCCCCCCCE TVIILRTADQKSRLLRVLAPLGVLLPSGLGLKIDDADVGRAGFVRCLPNGCVAEVVMDDT EEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHEEECCCCHHHHHHHHHH LIGRLRAGKMATFIIFQTPEEGIGIPLSLNGFGPGFDALK HHHHHCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA