| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is ctaE [H]
Identifier: 158424579
GI number: 158424579
Start: 3376039
End: 3376872
Strand: Reverse
Name: ctaE [H]
Synonym: AZC_2955
Alternate gene names: 158424579
Gene position: 3376872-3376039 (Counterclockwise)
Preceding gene: 158424580
Following gene: 158424578
Centisome position: 62.89
GC content: 64.27
Gene sequence:
>834_bases ATGGCCGAAGGACACGCCAAGCATCACGATTACCACGTGGTCGATCCGAGCCCGTGGCCGATCATCGGAGCCATCGCCGC CTTCGTCGGCGCGTCCGGCGCGGTGCTGTGGATGCACGGCGGCTCGGCACTGCCCATGTCGCTGGGCCTGCTCGGCATCT GCTACACCATGTTCGGCTGGTGGCGCGACATCGTGCGCGAAGGCCATATTGGCTTCCACACGAACGTGGTCCAGATCGGA TTCCGCTACGGCACGATCCTCTTCATCGCCTCCGAGGTGATGTTCTTCGTCGCCTGGTTCTGGGCCTTCTTCGATGCCTC GCTCTTCACCGGCGAGGCCATCAACTACCAGCGGATGGAGTTCACCGGCGGCGTGTGGCCCCCCAAGGGCATCGAACCGC TCTCGCCCTGGCACCTGCCGCTGCTCAACACCCTTATCCTGCTCACCTCCGCCACCACCCTCACCTGGGCGCACCATGCC CTGCTCGAAGGCGACCGGCAGGGCGTGAAGTGGGGCCTGTGGTGCACCGTCGGCCTCGGGTTGATCTTCAGCCTCTGCCA GGCCTACGAGTATCTCCACGTCCATTTCGCCTTCTCGGGCAACATCTACGGCGCCACCTTCTTCATGGCGACGGGCTTCC ACGGCTTCCACGTCATCGTCGGCACCATCTTCCTGATCGTCTGCCTGCTGCGGGTCTATCTGGGCGACTTCACGCCGCAG AAGCACTTCGGCTTCGAGGCGGCGGCCTGGTACTGGCACTTCGTGGACGTGGTCTGGCTGTTCCTCTTCACCTTTATCTA TGTGTGGGCAGCCGCCGGCCACGGCGGGCACTGA
Upstream 100 bases:
>100_bases CCGCGCCGAGGACACGCAAGGGTTTCAAGACCAACCATCCGCGCCAGATCGGCGCAGATGTGGCATACTGGAAACGGGAT AGAAGGGGAGGCCGCGTCAG
Downstream 100 bases:
>100_bases TCCTGCGCCACATCCGGAAAAAGGGGCGGCGCATCGGCCGCCCCTTTTTGCTGCCGGCGGAGGTCCCATGAATTCCGAGC ATTATTACGAGCCGGTCTCC
Product: cytochrome C oxidase subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MAEGHAKHHDYHVVDPSPWPIIGAIAAFVGASGAVLWMHGGSALPMSLGLLGICYTMFGWWRDIVREGHIGFHTNVVQIG FRYGTILFIASEVMFFVAWFWAFFDASLFTGEAINYQRMEFTGGVWPPKGIEPLSPWHLPLLNTLILLTSATTLTWAHHA LLEGDRQGVKWGLWCTVGLGLIFSLCQAYEYLHVHFAFSGNIYGATFFMATGFHGFHVIVGTIFLIVCLLRVYLGDFTPQ KHFGFEAAAWYWHFVDVVWLFLFTFIYVWAAAGHGGH
Sequences:
>Translated_277_residues MAEGHAKHHDYHVVDPSPWPIIGAIAAFVGASGAVLWMHGGSALPMSLGLLGICYTMFGWWRDIVREGHIGFHTNVVQIG FRYGTILFIASEVMFFVAWFWAFFDASLFTGEAINYQRMEFTGGVWPPKGIEPLSPWHLPLLNTLILLTSATTLTWAHHA LLEGDRQGVKWGLWCTVGLGLIFSLCQAYEYLHVHFAFSGNIYGATFFMATGFHGFHVIVGTIFLIVCLLRVYLGDFTPQ KHFGFEAAAWYWHFVDVVWLFLFTFIYVWAAAGHGGH >Mature_276_residues AEGHAKHHDYHVVDPSPWPIIGAIAAFVGASGAVLWMHGGSALPMSLGLLGICYTMFGWWRDIVREGHIGFHTNVVQIGF RYGTILFIASEVMFFVAWFWAFFDASLFTGEAINYQRMEFTGGVWPPKGIEPLSPWHLPLLNTLILLTSATTLTWAHHAL LEGDRQGVKWGLWCTVGLGLIFSLCQAYEYLHVHFAFSGNIYGATFFMATGFHGFHVIVGTIFLIVCLLRVYLGDFTPQK HFGFEAAAWYWHFVDVVWLFLFTFIYVWAAAGHGGH
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=266, Percent_Identity=51.8796992481203, Blast_Score=242, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6226542, Length=272, Percent_Identity=37.1323529411765, Blast_Score=169, Evalue=6e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 31151; Mature: 31020
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEGHAKHHDYHVVDPSPWPIIGAIAAFVGASGAVLWMHGGSALPMSLGLLGICYTMFGW CCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH WRDIVREGHIGFHTNVVQIGFRYGTILFIASEVMFFVAWFWAFFDASLFTGEAINYQRME HHHHHHCCCCCEECHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE FTGGVWPPKGIEPLSPWHLPLLNTLILLTSATTLTWAHHALLEGDRQGVKWGLWCTVGLG ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHH LIFSLCQAYEYLHVHFAFSGNIYGATFFMATGFHGFHVIVGTIFLIVCLLRVYLGDFTPQ HHHHHHHHHHHEEEEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC KHFGFEAAAWYWHFVDVVWLFLFTFIYVWAAAGHGGH HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AEGHAKHHDYHVVDPSPWPIIGAIAAFVGASGAVLWMHGGSALPMSLGLLGICYTMFGW CCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH WRDIVREGHIGFHTNVVQIGFRYGTILFIASEVMFFVAWFWAFFDASLFTGEAINYQRME HHHHHHCCCCCEECHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE FTGGVWPPKGIEPLSPWHLPLLNTLILLTSATTLTWAHHALLEGDRQGVKWGLWCTVGLG ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHH LIFSLCQAYEYLHVHFAFSGNIYGATFFMATGFHGFHVIVGTIFLIVCLLRVYLGDFTPQ HHHHHHHHHHHEEEEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC KHFGFEAAAWYWHFVDVVWLFLFTFIYVWAAAGHGGH HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]